Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:47 (4060458): wrapper (7.7.26015): starting
15:33:47 (4060458): wrapper: running run_atlas (--nthreads 4)
[2026-04-13 15:33:47] Arguments: --nthreads 4
[2026-04-13 15:33:47] Threads: 4
[2026-04-13 15:33:47] Checking for CVMFS
[2026-04-13 15:33:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 15:33:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 15:33:47] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 15:33:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 15:33:47] 2.9.2.0 3020148 5146 97008 158417 0 50 34576454 36864001 0 130560 0 4104131 99.991 192864 5864 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-13 15:33:47] CVMFS is ok
[2026-04-13 15:33:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 15:33:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 15:33:47] Further information can be found at the LHC@home message board.
[2026-04-13 15:33:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 15:33:47] Checking for apptainer binary...
[2026-04-13 15:33:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 15:33:47] Running /usr/bin/apptainer --version
[2026-04-13 15:33:47] apptainer version 1.4.1-1.1
[2026-04-13 15:33:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 15:33:48] thA369a
[2026-04-13 15:33:48] apptainer works
[2026-04-13 15:33:48] Set ATHENA_PROC_NUMBER=4
[2026-04-13 15:33:48] Set ATHENA_CORE_NUMBER=4
[2026-04-13 15:33:48] Starting ATLAS job with PandaID=7088533049
[2026-04-13 15:33:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 16:42:09]  *** The last 200 lines of the pilot log: ***
[2026-04-13 16:42:09] 2026-04-13 14:41:04,284 | INFO     | aborting loop
[2026-04-13 16:42:09] 2026-04-13 14:41:04,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 16:42:09] 2026-04-13 14:41:04,834 | INFO     | all data control threads have been joined
[2026-04-13 16:42:09] 2026-04-13 14:41:05,289 | INFO     | [job] retrieve thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,290 | INFO     | [job] queue monitor thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,290 | INFO     | [job] job monitor thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 16:42:09] 2026-04-13 14:41:05,718 | INFO     | all payload control threads have been joined
[2026-04-13 16:42:09] 2026-04-13 14:41:05,746 | INFO     | all job control threads have been joined
[2026-04-13 16:42:09] 2026-04-13 14:41:05,807 | INFO     | [job] validate thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,839 | INFO     | [data] control thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,861 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:05,889 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,046 | INFO     | [data] copytool_in thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,062 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,267 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,401 | INFO     | [payload] validate_post thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,724 | INFO     | [payload] control thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,752 | INFO     | [job] control thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:06,788 | INFO     | [payload] failed_post thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:07,374 | INFO     | [data] copytool_out thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:08,289 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 16:42:09] 2026-04-13 14:41:35,286 | INFO     | PID=4064564 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 16:42:09] 2026-04-13 14:41:35,286 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 16:42:09] 2026-04-13 14:41:35,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 16:42:09] 2026-04-13 14:41:35,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 16:42:09] 2026-04-13 14:42:04,269 | INFO     | [monitor] cgroup control has ended
[2026-04-13 16:42:09] 2026-04-13 14:42:04,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730852341568)>', '<ExcThread(monitor, started 139730352060160)>']
[2026-04-13 16:42:09] 2026-04-13 14:42:05,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 16:42:09] 2026-04-13 14:42:05,448 | INFO     | [monitor] control thread has ended
[2026-04-13 16:42:09] 2026-04-13 14:42:09,669 | INFO     | all workflow threads have been joined
[2026-04-13 16:42:09] 2026-04-13 14:42:09,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 16:42:09] 2026-04-13 14:42:09,670 | INFO     | traces error code: 0
[2026-04-13 16:42:09] 2026-04-13 14:42:09,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 16:42:09] 2026-04-13 14:42:09,724 [wrapper] ==== pilot stdout END ====
[2026-04-13 16:42:09] 2026-04-13 14:42:09,727 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 16:42:09] 2026-04-13 14:42:09,729 [wrapper] pilotpid: 4064564
[2026-04-13 16:42:09] 2026-04-13 14:42:09,732 [wrapper] Pilot exit status: 0
[2026-04-13 16:42:09] 2026-04-13 14:42:09,740 [wrapper] pandaids: 7088533049
[2026-04-13 16:42:09] 2026-04-13 14:42:09,759 [wrapper] cleanup supervisor_pilot 4073898 4064565
[2026-04-13 16:42:09] 2026-04-13 14:42:09,762 [wrapper] Test setup, not cleaning
[2026-04-13 16:42:09] 2026-04-13 14:42:09,764 [wrapper] apfmon messages muted
[2026-04-13 16:42:09] 2026-04-13 14:42:09,767 [wrapper] ==== wrapper stdout END ====
[2026-04-13 16:42:09] 2026-04-13 14:42:09,769 [wrapper] ==== wrapper stderr END ====
[2026-04-13 16:42:09]  *** Error codes and diagnostics ***
[2026-04-13 16:42:09]     "exeErrorCode": 0,
[2026-04-13 16:42:09]     "pilotErrorCode": 0,
[2026-04-13 16:42:09]  *** Listing of results directory ***
[2026-04-13 16:42:09] total 422744
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc    644190 Apr 12 23:52 pilot3.tar.gz
[2026-04-13 16:42:09] -rwx------ 1 boinc boinc     36322 Apr 12 23:53 runpilot2-wrapper.sh
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      5094 Apr 12 23:54 queuedata.json
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc       100 Apr 13 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 16:42:09] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 15:33 run_atlas
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc       105 Apr 13 15:33 job.xml
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc 226907333 Apr 13 15:33 EVNT.49263198._001501.pool.root.1
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc    656930 Apr 13 15:33 input.tar.gz
[2026-04-13 16:42:09] drwxrwx--x 2 boinc boinc      4096 Apr 13 15:33 shared
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc     15665 Apr 13 15:33 start_atlas.sh
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc         0 Apr 13 15:33 boinc_setup_complete
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      6358 Apr 13 15:33 init_data.xml
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc         0 Apr 13 15:33 boinc_lockfile
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      2576 Apr 13 15:33 pandaJob.out
[2026-04-13 16:42:09] -rw------- 1 boinc boinc    997737 Apr 13 15:33 agis_schedconf.cvmfs.json
[2026-04-13 16:42:09] -rw------- 1 boinc boinc   1511579 Apr 13 15:33 agis_ddmendpoints.agis.ALL.json
[2026-04-13 16:42:09] -rw------- 1 boinc boinc       423 Apr 13 15:33 workernode_map.json
[2026-04-13 16:42:09] drwx------ 5 boinc boinc      4096 Apr 13 15:33 pilot3
[2026-04-13 16:42:09] -rw------- 1 boinc boinc 200666915 Apr 13 16:40 HITS.49263200._055652.pool.root.1
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc       487 Apr 13 16:40 boinc_task_state.xml
[2026-04-13 16:42:09] -rw------- 1 boinc boinc      1014 Apr 13 16:40 memory_monitor_summary.json
[2026-04-13 16:42:09] -rw------- 1 boinc boinc    230569 Apr 13 16:41 log.49263200._055652.job.log.tgz.1
[2026-04-13 16:42:09] -rw------- 1 boinc boinc      6318 Apr 13 16:41 heartbeat_new.json
[2026-04-13 16:42:09] -rw------- 1 boinc boinc      6209 Apr 13 16:41 heartbeat.json
[2026-04-13 16:42:09] -rw------- 1 boinc boinc        95 Apr 13 16:41 pilot_heartbeat.json
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc        27 Apr 13 16:41 wrapper_checkpoint.txt
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      8192 Apr 13 16:41 boinc_mmap_file
[2026-04-13 16:42:09] -rw------- 1 boinc boinc      4747 Apr 13 16:42 pilotlog.txt
[2026-04-13 16:42:09] -rw------- 1 boinc boinc    405342 Apr 13 16:42 log.49263200._055652.job.log.1
[2026-04-13 16:42:09] -rw------- 1 boinc boinc       357 Apr 13 16:42 output.list
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc       410 Apr 13 16:42 runtime_log
[2026-04-13 16:42:09] -rw------- 1 boinc boinc    655360 Apr 13 16:42 result.tar.gz
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      8523 Apr 13 16:42 runtime_log.err
[2026-04-13 16:42:09] -rw------- 1 boinc boinc       658 Apr 13 16:42 1458c9a90c3d.diag
[2026-04-13 16:42:09] -rw-r--r-- 1 boinc boinc      6846 Apr 13 16:42 stderr.txt
[2026-04-13 16:42:09] HITS file was successfully produced:
[2026-04-13 16:42:09] -rw------- 1 boinc boinc 200666915 Apr 13 16:40 shared/HITS.pool.root.1
[2026-04-13 16:42:09]  *** Contents of shared directory: ***
[2026-04-13 16:42:09] total 418864
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc 226907333 Apr 13 15:33 ATLAS.root_0
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc    656930 Apr 13 15:33 input.tar.gz
[2026-04-13 16:42:09] -rw-r--r-- 2 boinc boinc     15665 Apr 13 15:33 start_atlas.sh
[2026-04-13 16:42:09] -rw------- 1 boinc boinc 200666915 Apr 13 16:40 HITS.pool.root.1
[2026-04-13 16:42:09] -rw------- 1 boinc boinc    655360 Apr 13 16:42 result.tar.gz
16:42:10 (4060458): run_atlas exited; CPU time 14851.671780
16:42:10 (4060458): called boinc_finish(0)

</stderr_txt>
]]>

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