Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:28:21 (3388): wrapper (7.7.26015): starting
02:28:21 (3388): wrapper: running run_atlas (--nthreads 8)
[2026-04-13 02:28:21] Arguments: --nthreads 8
[2026-04-13 02:28:21] Threads: 8
[2026-04-13 02:28:21] Checking for CVMFS
[2026-04-13 02:28:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 02:28:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 02:28:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 02:28:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 02:28:22] 2.11.0.0 6041 6331 59240 158396 3 1 3050715 4096001 0 130560 0 1419704 99.527 882474 319 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-13 02:28:22] CVMFS is ok
[2026-04-13 02:28:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 02:28:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 02:28:22] Further information can be found at the LHC@home message board.
[2026-04-13 02:28:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 02:28:22] Checking for apptainer binary...
[2026-04-13 02:28:22] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-13 02:28:22] apptainer is not installed, using version from CVMFS
[2026-04-13 02:28:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 02:28:22] WARNING: Environment variable TMPDIR already has value [/tmp/job_11495509/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node413
[2026-04-13 02:28:22] apptainer works
[2026-04-13 02:28:22] Set ATHENA_PROC_NUMBER=8
[2026-04-13 02:28:22] Set ATHENA_CORE_NUMBER=8
[2026-04-13 02:28:22] Starting ATLAS job with PandaID=7088495170
[2026-04-13 02:28:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11495509/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 03:13:45]  *** The last 200 lines of the pilot log: ***
[2026-04-13 03:13:45]  filetype=log
[2026-04-13 03:13:45]  guid=10e33415-85ed-403f-9b0d-148d212ef6d0
[2026-04-13 03:13:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-13 03:13:45]  is_altstaged=None
[2026-04-13 03:13:45]  is_tar=False
[2026-04-13 03:13:45]  lfn=log.49263191._061596.job.log.tgz.1
[2026-04-13 03:13:45]  mtime=0
[2026-04-13 03:13:45]  protocol_id=None
[2026-04-13 03:13:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-13 03:13:45]  replicas=None
[2026-04-13 03:13:45]  scope=mc23_13p6TeV
[2026-04-13 03:13:45]  status=None
[2026-04-13 03:13:45]  status_code=0
[2026-04-13 03:13:45]  storage_token=
[2026-04-13 03:13:45]  surl=/tmp/job_11495509/atlas/pilot/slots/0/PanDA_Pilot-7088495170/log.49263191._061596.job.log.tgz.1
[2026-04-13 03:13:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/f9/log.49263191._061596.job.log.tgz.1
[2026-04-13 03:13:45]  workdir=None
[2026-04-13 03:13:45] ]
[2026-04-13 03:13:45] 2026-04-13 01:13:24,043 | INFO     | transferring file log.49263191._061596.job.log.tgz.1 from /tmp/job_11495509/atlas/pilot/slots/0/PanDA_Pilot-7088495170/log.49263191._061596.job.log.tgz.1 to /tmp/j
[2026-04-13 03:13:45] 2026-04-13 01:13:24,043 | INFO     | executing command: /usr/bin/env mv /tmp/job_11495509/atlas/pilot/slots/0/PanDA_Pilot-7088495170/log.49263191._061596.job.log.tgz.1 /tmp/job_11495509/atlas/pilot/sl
[2026-04-13 03:13:45] 2026-04-13 01:13:24,051 | INFO     | adding to output.list: log.49263191._061596.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/f9/log.49263191._061596.job.log.tg
[2026-04-13 03:13:45] 2026-04-13 01:13:24,052 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-13 03:13:45] 2026-04-13 01:13:24,052 | INFO     | summary of transferred files:
[2026-04-13 03:13:45] 2026-04-13 01:13:24,052 | INFO     |  -- lfn=log.49263191._061596.job.log.tgz.1, status_code=0, status=transferred
[2026-04-13 03:13:45] 2026-04-13 01:13:24,052 | INFO     | stage-out finished correctly
[2026-04-13 03:13:45] 2026-04-13 01:13:25,865 | INFO     | PID=8146 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-13 03:13:45] 2026-04-13 01:13:26,545 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-13 03:13:45] 2026-04-13 01:13:26,848 | INFO     | job 7088495170 has state=finished
[2026-04-13 03:13:45] 2026-04-13 01:13:26,848 | INFO     | preparing for final server update for job 7088495170 in state='finished'
[2026-04-13 03:13:45] 2026-04-13 01:13:26,848 | INFO     | reading metadata from: /tmp/job_11495509/atlas/pilot/slots/0/PanDA_Pilot-7088495170/jobReport.json
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | added worker_node to metadata from /tmp/job_11495509/atlas/pilot/slots/0/workernode_map.json
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | this job has now completed (state=finished)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | log transfer has been attempted: DONE
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | job 7088495170 has finished - writing final server update
[2026-04-13 03:13:45] 2026-04-13 01:13:26,850 | INFO     | total number of processed events: 400 (read)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,868 | INFO     | using path: /tmp/job_11495509/atlas/pilot/slots/0/PanDA_Pilot-7088495170/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,868 | INFO     | extracted standard info from prmon json
[2026-04-13 03:13:45] 2026-04-13 01:13:26,868 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 03:13:45] 2026-04-13 01:13:26,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 03:13:45] 2026-04-13 01:13:26,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | fitting pss+swap vs Time
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | sum of square deviations: 15695178.0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | sum of deviations: 112021802.99999999
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | mean x (centered): 0.0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | mean y: 2986664.4594594594
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | intersect: 2986664.4594594594
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | chi2: 9.556686763041315e-05
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | current memory leak: 7.14 B/s (using 37 data points, chi2=0.00)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | ..............................
[2026-04-13 03:13:45] 2026-04-13 01:13:26,869 | INFO     | . Timing measurements:
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . get job = 0 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . initial setup = 2 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . payload setup = 4 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . stage-in = 0 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . payload execution = 2674 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . stage-out = 0 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | . log creation = 0 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,870 | INFO     | ..............................
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | 
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | job summary report
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | --------------------------------------------------
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | PanDA job id: 7088495170
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | task id: 49263191
[2026-04-13 03:13:45] 2026-04-13 01:13:26,920 | INFO     | errors: (none)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | pilot state: finished 
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | transexitcode: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | exeerrorcode: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | exeerrordiag: 
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | exitcode: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | exitmsg: OK
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | cpuconsumptiontime: 20020 s
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | nevents: 400
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | neventsw: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | pid: 13882
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | pgrp: 13882
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | corecount: 8
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | event service: False
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | sizes: {0: 2279064, 1: 2281676, 11: 2281676, 2683: 2307090, 2684: 2316118, 2687: 2316528}
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | --------------------------------------------------
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | 
[2026-04-13 03:13:45] 2026-04-13 01:13:26,921 | INFO     | executing command: ls -lF /tmp/job_11495509/atlas/pilot/slots/0
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | job 7088495170 has completed (purged errors)
[2026-04-13 03:13:45] 2026-04-13 01:13:26,932 | INFO     | overall cleanup function is called
[2026-04-13 03:13:45] 2026-04-13 01:13:27,938 | INFO     | --- collectZombieJob: --- 10, [13882]
[2026-04-13 03:13:45] 2026-04-13 01:13:27,938 | INFO     | zombie collector waiting for pid 13882
[2026-04-13 03:13:45] 2026-04-13 01:13:27,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 03:13:45] 2026-04-13 01:13:27,938 | INFO     | collected zombie processes
[2026-04-13 03:13:45] 2026-04-13 01:13:27,938 | INFO     | will attempt to kill all subprocesses of pid=13882
[2026-04-13 03:13:45] 2026-04-13 01:13:28,025 | INFO     | process IDs to be killed: [13882] (in reverse order)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,054 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 03:13:45] 2026-04-13 01:13:28,057 | INFO     | did not find any defunct processes belonging to 13882
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | did not find any defunct processes belonging to 13882
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | Ready for new job
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | **************************************
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | **************************************
[2026-04-13 03:13:45] 2026-04-13 01:13:28,060 | INFO     | 
[2026-04-13 03:13:45] 2026-04-13 01:13:28,075 | INFO     | architecture information:
[2026-04-13 03:13:45] 2026-04-13 01:13:28,075 | INFO     | executing command: cat /etc/os-release
[2026-04-13 03:13:45] 2026-04-13 01:13:28,082 | INFO     | cat /etc/os-release:
[2026-04-13 03:13:45] NAME="CentOS Linux"
[2026-04-13 03:13:45] VERSION="7 (Core)"
[2026-04-13 03:13:45] ID="centos"
[2026-04-13 03:13:45] ID_LIKE="rhel fedora"
[2026-04-13 03:13:45] VERSION_ID="7"
[2026-04-13 03:13:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 03:13:45] ANSI_COLOR="0;31"
[2026-04-13 03:13:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 03:13:45] HOME_URL="https://www.centos.org/"
[2026-04-13 03:13:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 03:13:45] 
[2026-04-13 03:13:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 03:13:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 03:13:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 03:13:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 03:13:45] 
[2026-04-13 03:13:45] 2026-04-13 01:13:28,082 | INFO     | **************************************
[2026-04-13 03:13:45] 2026-04-13 01:13:28,536 | WARNING  | process 13882 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 03:13:45] 2026-04-13 01:13:28,585 | INFO     | executing command: df -mP /tmp/job_11495509/atlas/pilot/slots/0
[2026-04-13 03:13:45] 2026-04-13 01:13:28,591 | INFO     | sufficient remaining disk space (228127145984 B)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | INFO     | update_server=False
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 03:13:45] 2026-04-13 01:13:28,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 03:13:45] 2026-04-13 01:13:28,611 | INFO     | using path: /tmp/job_11495509/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 03:13:45] 2026-04-13 01:13:28,676 | INFO     | all payload control threads have been joined
[2026-04-13 03:13:45] 2026-04-13 01:13:28,696 | INFO     | number of running child processes to parent process 13882: 1
[2026-04-13 03:13:45] 2026-04-13 01:13:28,696 | INFO     | maximum number of monitored processes: 6
[2026-04-13 03:13:45] 2026-04-13 01:13:28,696 | INFO     | aborting job monitoring since job object (job id=7088495170) has expired
[2026-04-13 03:13:45] 2026-04-13 01:13:28,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 03:13:45] 2026-04-13 01:13:28,696 | INFO     | will abort loop
[2026-04-13 03:13:45] 2026-04-13 01:13:29,241 | INFO     | all job control threads have been joined
[2026-04-13 03:13:45] 2026-04-13 01:13:29,558 | INFO     | all data control threads have been joined
[2026-04-13 03:13:45] 2026-04-13 01:13:29,597 | INFO     | [job] retrieve thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:29,597 | INFO     | [job] queue monitor thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:29,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 03:13:45] 2026-04-13 01:13:29,682 | INFO     | [payload] control thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:29,702 | INFO     | [job] job monitor thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:29,734 | INFO     | [payload] validate_post thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,051 | INFO     | [payload] failed_post thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,246 | INFO     | [job] control thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,563 | INFO     | [data] control thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,576 | INFO     | [job] validate thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,781 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,784 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,802 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:30,889 | INFO     | [data] copytool_in thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:31,617 | INFO     | [data] copytool_out thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:32,598 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:33,128 | INFO     | [monitor] cgroup control has ended
[2026-04-13 03:13:45] 2026-04-13 01:13:38,934 | INFO     | job.realtimelogging is not enabled
[2026-04-13 03:13:45] 2026-04-13 01:13:39,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 03:13:45] 2026-04-13 01:13:40,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-04-13 03:13:45] 2026-04-13 01:13:40,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 03:13:45] 2026-04-13 01:13:40,653 | INFO     | [monitor] control thread has ended
[2026-04-13 03:13:45] 2026-04-13 01:13:45,306 | INFO     | all workflow threads have been joined
[2026-04-13 03:13:45] 2026-04-13 01:13:45,306 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 03:13:45] 2026-04-13 01:13:45,306 | INFO     | traces error code: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:45,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 03:13:45] 2026-04-13 01:13:45,358 [wrapper] ==== pilot stdout END ====
[2026-04-13 03:13:45] 2026-04-13 01:13:45,359 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 03:13:45] 2026-04-13 01:13:45,361 [wrapper] pilotpid: 8146
[2026-04-13 03:13:45] 2026-04-13 01:13:45,362 [wrapper] Pilot exit status: 0
[2026-04-13 03:13:45] 2026-04-13 01:13:45,366 [wrapper] pandaids: 7088495170
[2026-04-13 03:13:45] 2026-04-13 01:13:45,386 [wrapper] cleanup supervisor_pilot 27879 8147
[2026-04-13 03:13:45] 2026-04-13 01:13:45,387 [wrapper] Test setup, not cleaning
[2026-04-13 03:13:45] 2026-04-13 01:13:45,388 [wrapper] apfmon messages muted
[2026-04-13 03:13:45] 2026-04-13 01:13:45,389 [wrapper] ==== wrapper stdout END ====
[2026-04-13 03:13:45] 2026-04-13 01:13:45,390 [wrapper] ==== wrapper stderr END ====
[2026-04-13 03:13:45]  *** Error codes and diagnostics ***
[2026-04-13 03:13:45]     "exeErrorCode": 0,
[2026-04-13 03:13:45]     "pilotErrorCode": 0,
[2026-04-13 03:13:45]  *** Listing of results directory ***
[2026-04-13 03:13:45] total 417888
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    644190 Apr 12 22:10 pilot3.tar.gz
[2026-04-13 03:13:45] -rwx------ 1 mf493845 unix-user     36322 Apr 12 22:11 runpilot2-wrapper.sh
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      5094 Apr 12 22:13 queuedata.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       100 Apr 13 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 03:13:45] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 13 01:31 run_atlas
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       105 Apr 13 01:31 job.xml
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user 223804115 Apr 13 02:28 EVNT.49263189._001623.pool.root.1
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 13 02:28 start_atlas.sh
[2026-04-13 03:13:45] drwxrwx--x 2 mf493845 unix-user       100 Apr 13 02:28 shared
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user    656922 Apr 13 02:28 input.tar.gz
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      6307 Apr 13 02:28 init_data.xml
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user         0 Apr 13 02:28 boinc_setup_complete
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      8192 Apr 13 02:28 boinc_mmap_file
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user         0 Apr 13 02:28 boinc_lockfile
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      2578 Apr 13 02:28 pandaJob.out
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    997767 Apr 13 02:28 agis_schedconf.cvmfs.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user   1511579 Apr 13 02:28 agis_ddmendpoints.agis.ALL.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       416 Apr 13 02:28 workernode_map.json
[2026-04-13 03:13:45] drwx------ 5 mf493845 unix-user       480 Apr 13 02:28 pilot3
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user 198944652 Apr 13 03:12 HITS.49263191._061596.pool.root.1
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user        95 Apr 13 03:13 pilot_heartbeat.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      1013 Apr 13 03:13 memory_monitor_summary.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    275503 Apr 13 03:13 log.49263191._061596.job.log.tgz.1
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      6340 Apr 13 03:13 heartbeat_new.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      6230 Apr 13 03:13 heartbeat.json
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      5165 Apr 13 03:13 pilotlog.txt
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    294049 Apr 13 03:13 log.49263191._061596.job.log.1
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       357 Apr 13 03:13 output.list
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       410 Apr 13 03:13 runtime_log
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    583680 Apr 13 03:13 result.tar.gz
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user      8841 Apr 13 03:13 runtime_log.err
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user       643 Apr 13 03:13 fc67469da252.diag
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user     21740 Apr 13 03:13 stderr.txt
[2026-04-13 03:13:45] HITS file was successfully produced:
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user 198944652 Apr 13 03:12 shared/HITS.pool.root.1
[2026-04-13 03:13:45]  *** Contents of shared directory: ***
[2026-04-13 03:13:45] total 414076
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user 223804115 Apr 13 02:28 ATLAS.root_0
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 13 02:28 start_atlas.sh
[2026-04-13 03:13:45] -rw-r--r-- 2 mf493845 unix-user    656922 Apr 13 02:28 input.tar.gz
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user 198944652 Apr 13 03:12 HITS.pool.root.1
[2026-04-13 03:13:45] -rw------- 1 mf493845 unix-user    583680 Apr 13 03:13 result.tar.gz
03:13:47 (3388): run_atlas exited; CPU time 20052.889712
03:13:47 (3388): called boinc_finish(0)

</stderr_txt>
]]>

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