Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:35:44 (4151886): wrapper (7.7.26015): starting
10:35:44 (4151886): wrapper: running run_atlas (--nthreads 2)
[2026-04-13 10:35:44] Arguments: --nthreads 2
[2026-04-13 10:35:44] Threads: 2
[2026-04-13 10:35:44] Checking for CVMFS
[2026-04-13 10:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 10:35:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 10:35:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 10:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 10:35:45] 2.9.2.0 3627210 5118 59500 158409 1 50 30801685 36864001 0 130560 0 2119018 99.983 190342 11161 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-13 10:35:45] CVMFS is ok
[2026-04-13 10:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 10:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 10:35:45] Further information can be found at the LHC@home message board.
[2026-04-13 10:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 10:35:45] Checking for apptainer binary...
[2026-04-13 10:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 10:35:45] Running /usr/bin/apptainer --version
[2026-04-13 10:35:45] apptainer version 1.4.1-1.1
[2026-04-13 10:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 10:35:45] madmaxA277a
[2026-04-13 10:35:45] apptainer works
[2026-04-13 10:35:45] Set ATHENA_PROC_NUMBER=2
[2026-04-13 10:35:45] Set ATHENA_CORE_NUMBER=2
[2026-04-13 10:35:45] Starting ATLAS job with PandaID=7088523899
[2026-04-13 10:35:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 12:48:21]  *** The last 200 lines of the pilot log: ***
[2026-04-13 12:48:21] 2026-04-13 10:47:20,104 | INFO     | 
[2026-04-13 12:48:21] 2026-04-13 10:47:20,104 | INFO     | architecture information:
[2026-04-13 12:48:21] 2026-04-13 10:47:20,104 | INFO     | executing command: cat /etc/os-release
[2026-04-13 12:48:21] 2026-04-13 10:47:20,113 | INFO     | cat /etc/os-release:
[2026-04-13 12:48:21] NAME="CentOS Linux"
[2026-04-13 12:48:21] VERSION="7 (Core)"
[2026-04-13 12:48:21] ID="centos"
[2026-04-13 12:48:21] ID_LIKE="rhel fedora"
[2026-04-13 12:48:21] VERSION_ID="7"
[2026-04-13 12:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 12:48:21] ANSI_COLOR="0;31"
[2026-04-13 12:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 12:48:21] HOME_URL="https://www.centos.org/"
[2026-04-13 12:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 12:48:21] 
[2026-04-13 12:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 12:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 12:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 12:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 12:48:21] 
[2026-04-13 12:48:21] 2026-04-13 10:47:20,113 | INFO     | **************************************
[2026-04-13 12:48:21] 2026-04-13 10:47:20,616 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | INFO     | sufficient remaining disk space (487595180032 B)
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | INFO     | update_server=False
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 12:48:21] 2026-04-13 10:47:20,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 12:48:21] 2026-04-13 10:47:20,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 12:48:21] 2026-04-13 10:47:21,116 | INFO     | all payload control threads have been joined
[2026-04-13 12:48:21] 2026-04-13 10:47:21,529 | INFO     | all data control threads have been joined
[2026-04-13 12:48:21] 2026-04-13 10:47:21,591 | INFO     | all job control threads have been joined
[2026-04-13 12:48:21] 2026-04-13 10:47:21,634 | INFO     | [job] retrieve thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:21,635 | INFO     | [job] queue monitor thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:21,682 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:21,760 | INFO     | [payload] validate_post thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:21,862 | INFO     | [data] copytool_in thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,122 | INFO     | [payload] control thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,249 | INFO     | [payload] failed_post thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,535 | INFO     | [data] control thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,597 | INFO     | [job] control thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,851 | INFO     | [data] copytool_out thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:22,952 | WARNING  | process 4160329 can no longer be monitored (due to stat problems) - aborting
[2026-04-13 12:48:21] 2026-04-13 10:47:22,972 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 12:48:21] 2026-04-13 10:47:22,972 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 12:48:21] 2026-04-13 10:47:22,972 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-13 12:48:21] 2026-04-13 10:47:22,972 | WARNING  | maxPSS not found in memory monitor output
[2026-04-13 12:48:21] 2026-04-13 10:47:22,973 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7088523899/payload.stdout) since it has not been created yet
[2026-04-13 12:48:21] 2026-04-13 10:47:22,973 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-13 12:48:21] 2026-04-13 10:47:22,982 | INFO     | sufficient remaining disk space (487595180032 B)
[2026-04-13 12:48:21] 2026-04-13 10:47:22,983 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-13 12:48:21] 2026-04-13 10:47:22,983 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7088523899/HITS.49263191._062164.pool.root.1 since it does not exist
[2026-04-13 12:48:21] 2026-04-13 10:47:23,008 | INFO     | number of running child processes to parent process 4160329: 1
[2026-04-13 12:48:21] 2026-04-13 10:47:23,008 | INFO     | maximum number of monitored processes: 6
[2026-04-13 12:48:21] 2026-04-13 10:47:23,008 | INFO     | aborting job monitoring since job object (job id=7088523899) has expired
[2026-04-13 12:48:21] 2026-04-13 10:47:23,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 12:48:21] 2026-04-13 10:47:23,009 | INFO     | will abort loop
[2026-04-13 12:48:21] 2026-04-13 10:47:23,037 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:23,047 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:23,058 | INFO     | [job] validate thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:24,014 | INFO     | [job] job monitor thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:24,635 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:31,130 | INFO     | job.realtimelogging is not enabled
[2026-04-13 12:48:21] 2026-04-13 10:47:32,136 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 12:48:21] 2026-04-13 10:47:50,113 | INFO     | PID=4155916 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 12:48:21] 2026-04-13 10:47:50,113 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 12:48:21] 2026-04-13 10:47:50,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 12:48:21] 2026-04-13 10:47:50,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 12:48:21] 2026-04-13 10:48:15,696 | INFO     | [monitor] cgroup control has ended
[2026-04-13 12:48:21] 2026-04-13 10:48:16,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696707094336)>', '<ExcThread(monitor, started 139695539345152)>']
[2026-04-13 12:48:21] 2026-04-13 10:48:17,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 12:48:21] 2026-04-13 10:48:17,254 | INFO     | [monitor] control thread has ended
[2026-04-13 12:48:21] 2026-04-13 10:48:21,791 | INFO     | all workflow threads have been joined
[2026-04-13 12:48:21] 2026-04-13 10:48:21,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 12:48:21] 2026-04-13 10:48:21,792 | INFO     | traces error code: 0
[2026-04-13 12:48:21] 2026-04-13 10:48:21,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 12:48:21] 2026-04-13 10:48:21,836 [wrapper] ==== pilot stdout END ====
[2026-04-13 12:48:21] 2026-04-13 10:48:21,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 12:48:21] 2026-04-13 10:48:21,841 [wrapper] pilotpid: 4155916
[2026-04-13 12:48:21] 2026-04-13 10:48:21,843 [wrapper] Pilot exit status: 0
[2026-04-13 12:48:21] 2026-04-13 10:48:21,849 [wrapper] pandaids: 7088523899
[2026-04-13 12:48:21] 2026-04-13 10:48:21,864 [wrapper] cleanup supervisor_pilot 4165827 4155917
[2026-04-13 12:48:21] 2026-04-13 10:48:21,866 [wrapper] Test setup, not cleaning
[2026-04-13 12:48:21] 2026-04-13 10:48:21,868 [wrapper] apfmon messages muted
[2026-04-13 12:48:21] 2026-04-13 10:48:21,871 [wrapper] ==== wrapper stdout END ====
[2026-04-13 12:48:21] 2026-04-13 10:48:21,873 [wrapper] ==== wrapper stderr END ====
[2026-04-13 12:48:21]  *** Error codes and diagnostics ***
[2026-04-13 12:48:21]     "exeErrorCode": 0,
[2026-04-13 12:48:21]     "pilotErrorCode": 0,
[2026-04-13 12:48:21]  *** Listing of results directory ***
[2026-04-13 12:48:21] total 420272
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc      5094 Apr 12 23:04 queuedata.json
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc    644190 Apr 12 23:04 pilot3.tar.gz
[2026-04-13 12:48:21] -rwx------ 1 boinc boinc     36322 Apr 12 23:04 runpilot2-wrapper.sh
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc       100 Apr 13 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 12:48:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 10:35 run_atlas
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc       105 Apr 13 10:35 job.xml
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc 223575784 Apr 13 10:35 EVNT.49263189._001645.pool.root.1
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc    656915 Apr 13 10:35 input.tar.gz
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc     15665 Apr 13 10:35 start_atlas.sh
[2026-04-13 12:48:21] drwxrwx--x 2 boinc boinc      4096 Apr 13 10:35 shared
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc         0 Apr 13 10:35 boinc_setup_complete
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc      6125 Apr 13 10:35 init_data.xml
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc         0 Apr 13 10:35 boinc_lockfile
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc      2578 Apr 13 10:35 pandaJob.out
[2026-04-13 12:48:21] -rw------- 1 boinc boinc    997783 Apr 13 10:35 agis_schedconf.cvmfs.json
[2026-04-13 12:48:21] -rw------- 1 boinc boinc   1511579 Apr 13 10:35 agis_ddmendpoints.agis.ALL.json
[2026-04-13 12:48:21] -rw------- 1 boinc boinc       430 Apr 13 10:36 workernode_map.json
[2026-04-13 12:48:21] drwx------ 5 boinc boinc      4096 Apr 13 10:36 pilot3
[2026-04-13 12:48:21] -rw------- 1 boinc boinc 200761626 Apr 13 12:46 HITS.49263191._062164.pool.root.1
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc       487 Apr 13 12:47 boinc_task_state.xml
[2026-04-13 12:48:21] -rw------- 1 boinc boinc      1016 Apr 13 12:47 memory_monitor_summary.json
[2026-04-13 12:48:21] -rw------- 1 boinc boinc    241719 Apr 13 12:47 log.49263191._062164.job.log.tgz.1
[2026-04-13 12:48:21] -rw------- 1 boinc boinc      6337 Apr 13 12:47 heartbeat_new.json
[2026-04-13 12:48:21] -rw------- 1 boinc boinc      6228 Apr 13 12:47 heartbeat.json
[2026-04-13 12:48:21] -rw------- 1 boinc boinc        95 Apr 13 12:47 pilot_heartbeat.json
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc        27 Apr 13 12:47 wrapper_checkpoint.txt
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc      8192 Apr 13 12:47 boinc_mmap_file
[2026-04-13 12:48:21] -rw------- 1 boinc boinc      6320 Apr 13 12:48 pilotlog.txt
[2026-04-13 12:48:21] -rw------- 1 boinc boinc    745873 Apr 13 12:48 log.49263191._062164.job.log.1
[2026-04-13 12:48:21] -rw------- 1 boinc boinc       357 Apr 13 12:48 output.list
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc       410 Apr 13 12:48 runtime_log
[2026-04-13 12:48:21] -rw------- 1 boinc boinc   1003520 Apr 13 12:48 result.tar.gz
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc      8543 Apr 13 12:48 runtime_log.err
[2026-04-13 12:48:21] -rw------- 1 boinc boinc       663 Apr 13 12:48 08ed7d2e240f.diag
[2026-04-13 12:48:21] -rw-r--r-- 1 boinc boinc     10821 Apr 13 12:48 stderr.txt
[2026-04-13 12:48:21] HITS file was successfully produced:
[2026-04-13 12:48:21] -rw------- 1 boinc boinc 200761626 Apr 13 12:46 shared/HITS.pool.root.1
[2026-04-13 12:48:21]  *** Contents of shared directory: ***
[2026-04-13 12:48:21] total 416040
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc 223575784 Apr 13 10:35 ATLAS.root_0
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc    656915 Apr 13 10:35 input.tar.gz
[2026-04-13 12:48:21] -rw-r--r-- 2 boinc boinc     15665 Apr 13 10:35 start_atlas.sh
[2026-04-13 12:48:21] -rw------- 1 boinc boinc 200761626 Apr 13 12:46 HITS.pool.root.1
[2026-04-13 12:48:21] -rw------- 1 boinc boinc   1003520 Apr 13 12:48 result.tar.gz
12:48:23 (4151886): run_atlas exited; CPU time 15137.553933
12:48:23 (4151886): called boinc_finish(0)

</stderr_txt>
]]>

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