Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:54:27 (1176031): wrapper (7.7.26015): starting
17:54:27 (1176031): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 17:54:27] Arguments: --nthreads 8
[2026-04-12 17:54:27] Threads: 8
[2026-04-12 17:54:27] Checking for CVMFS
[2026-04-12 17:54:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 17:54:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 17:54:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 17:54:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 17:54:32] 2.13.3.0 12442 17626 360976 158392 1 276 28877452 32935937 27660 16776704 0 27922612 99.399 47612373 15024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-12 17:54:32] CVMFS is ok
[2026-04-12 17:54:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 17:54:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 17:54:32] Further information can be found at the LHC@home message board.
[2026-04-12 17:54:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 17:54:32] Checking for apptainer binary...
[2026-04-12 17:54:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 17:54:32] Running /usr/bin/apptainer --version
[2026-04-12 17:54:32] apptainer version 1.4.5-3.el9
[2026-04-12 17:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 17:54:33] c6-12-25-4.aglt2.org
[2026-04-12 17:54:33] apptainer works
[2026-04-12 17:54:34] Set ATHENA_PROC_NUMBER=8
[2026-04-12 17:54:34] Set ATHENA_CORE_NUMBER=8
[2026-04-12 17:54:34] Starting ATLAS job with PandaID=7088495414
[2026-04-12 17:54:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:13:50 (1233298): wrapper (7.7.26015): starting
18:13:50 (1233298): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 18:13:50] Arguments: --nthreads 8
[2026-04-12 18:13:50] Threads: 8
[2026-04-12 18:13:50] This job has been restarted, cleaning up previous attempt
[2026-04-12 18:13:50] Checking for CVMFS
[2026-04-12 18:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 18:13:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 18:13:51] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 18:13:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 18:13:51] 2.13.3.0 12442 17645 353752 158393 2 62 29056448 32935937 24219 16776704 0 28036847 99.400 47617385 15023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-12 18:13:51] CVMFS is ok
[2026-04-12 18:13:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 18:13:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 18:13:51] Further information can be found at the LHC@home message board.
[2026-04-12 18:13:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 18:13:51] Checking for apptainer binary...
[2026-04-12 18:13:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 18:13:51] Running /usr/bin/apptainer --version
[2026-04-12 18:13:51] apptainer version 1.4.5-3.el9
[2026-04-12 18:13:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 18:13:52] c6-12-25-4.aglt2.org
[2026-04-12 18:13:52] apptainer works
[2026-04-12 18:13:52] Set ATHENA_PROC_NUMBER=8
[2026-04-12 18:13:52] Set ATHENA_CORE_NUMBER=8
[2026-04-12 18:13:52] Starting ATLAS job with PandaID=7088495414
[2026-04-12 18:13:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 07:33:17]  *** The last 200 lines of the pilot log: ***
[2026-04-13 07:33:18] 2026-04-13 11:15:17,216 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7088495414/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 07:33:18] 2026-04-13 11:15:17,218 | INFO     | extracted standard info from prmon json
[2026-04-13 07:33:18] 2026-04-13 11:15:17,218 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 07:33:18] 2026-04-13 11:15:17,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 07:33:18] 2026-04-13 11:15:17,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 07:33:18] 2026-04-13 11:15:17,982 | INFO     | monitor loop #1789: job 0:7088495414 is in state 'finished'
[2026-04-13 07:33:18] 2026-04-13 11:15:17,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 07:33:18] 2026-04-13 11:15:18,006 | INFO     | fitting pss+swap vs Time
[2026-04-13 07:33:18] 2026-04-13 11:15:18,029 | INFO     | sum of square deviations: 139913075624.8761
[2026-04-13 07:33:18] 2026-04-13 11:15:18,222 | INFO     | sum of deviations: 254670338692.08093
[2026-04-13 07:33:18] 2026-04-13 11:15:18,223 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:18,223 | INFO     | mean y: 2481785.807040417
[2026-04-13 07:33:18] 2026-04-13 11:15:18,223 | INFO     | intersect: 2481785.807040417
[2026-04-13 07:33:18] 2026-04-13 11:15:18,276 | INFO     | chi2: 5.340079388314024
[2026-04-13 07:33:18] 2026-04-13 11:15:18,300 | INFO     | sum of square deviations: 137194688551.6011
[2026-04-13 07:33:18] 2026-04-13 11:15:18,536 | INFO     | sum of deviations: 399077024460.12384
[2026-04-13 07:33:18] 2026-04-13 11:15:18,537 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:18,537 | INFO     | mean y: 2489865.1640419946
[2026-04-13 07:33:18] 2026-04-13 11:15:18,537 | INFO     | intersect: 2489865.1640419946
[2026-04-13 07:33:18] 2026-04-13 11:15:18,587 | INFO     | chi2: 3.2323014171661275
[2026-04-13 07:33:18] 2026-04-13 11:15:18,588 | INFO     | current chi2=3.2323014171661275 (change=39.47091078384448 %)
[2026-04-13 07:33:18] 2026-04-13 11:15:18,625 | INFO     | sum of square deviations: 134511650672.90097
[2026-04-13 07:33:18] 2026-04-13 11:15:19,029 | INFO     | sum of deviations: 395362992822.8307
[2026-04-13 07:33:18] 2026-04-13 11:15:19,030 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:19,030 | INFO     | mean y: 2489654.0607661824
[2026-04-13 07:33:18] 2026-04-13 11:15:19,030 | INFO     | intersect: 2489654.0607661824
[2026-04-13 07:33:18] 2026-04-13 11:15:19,077 | INFO     | chi2: 3.232411628458176
[2026-04-13 07:33:18] 2026-04-13 11:15:19,078 | INFO     | current chi2=3.232411628458176 (change=-0.0034096848599350256 %)
[2026-04-13 07:33:18] 2026-04-13 11:15:19,078 | INFO     | right removable region: 756
[2026-04-13 07:33:18] 2026-04-13 11:15:19,105 | INFO     | sum of square deviations: 137194504941.60115
[2026-04-13 07:33:18] 2026-04-13 11:15:19,701 | INFO     | sum of deviations: 42766296806.46956
[2026-04-13 07:33:18] 2026-04-13 11:15:19,701 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:19,702 | INFO     | mean y: 2493663.0183727033
[2026-04-13 07:33:18] 2026-04-13 11:15:19,702 | INFO     | intersect: 2493663.0183727033
[2026-04-13 07:33:18] 2026-04-13 11:15:19,721 | INFO     | chi2: 2.5233344540153118
[2026-04-13 07:33:18] 2026-04-13 11:15:19,722 | INFO     | current chi2=2.5233344540153118 (change=52.74724829864408 %)
[2026-04-13 07:33:18] 2026-04-13 11:15:19,768 | INFO     | sum of square deviations: 134511376783.3156
[2026-04-13 07:33:18] 2026-04-13 11:15:20,057 | INFO     | sum of deviations: -27795616656.171608
[2026-04-13 07:33:18] 2026-04-13 11:15:20,058 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:20,058 | INFO     | mean y: 2497671.1268163803
[2026-04-13 07:33:18] 2026-04-13 11:15:20,058 | INFO     | intersect: 2497671.1268163803
[2026-04-13 07:33:18] 2026-04-13 11:15:20,094 | INFO     | chi2: 2.2279883132854157
[2026-04-13 07:33:18] 2026-04-13 11:15:20,103 | INFO     | current chi2=2.2279883132854157 (change=11.704597472599005 %)
[2026-04-13 07:33:18] 2026-04-13 11:15:20,103 | INFO     | left removable region: 10
[2026-04-13 07:33:18] 2026-04-13 11:15:20,110 | INFO     | sum of square deviations: 128732418164.65952
[2026-04-13 07:33:18] 2026-04-13 11:15:20,276 | INFO     | sum of deviations: 114383427665.84991
[2026-04-13 07:33:18] 2026-04-13 11:15:20,277 | INFO     | mean x (centered): 0.0
[2026-04-13 07:33:18] 2026-04-13 11:15:20,277 | INFO     | mean y: 2505835.9168900806
[2026-04-13 07:33:18] 2026-04-13 11:15:20,277 | INFO     | intersect: 2505835.9168900806
[2026-04-13 07:33:18] 2026-04-13 11:15:20,285 | INFO     | chi2: 0.09224075937595998
[2026-04-13 07:33:18] 2026-04-13 11:15:20,285 | INFO     | current memory leak: 0.89 B/s (using 746 data points, chi2=0.09)
[2026-04-13 07:33:18] 2026-04-13 11:15:20,287 | INFO     | could have reported an average CPU frequency of 999 MHz (29 samples)
[2026-04-13 07:33:18] 2026-04-13 11:15:20,292 | INFO     | ..............................
[2026-04-13 07:33:18] 2026-04-13 11:15:20,292 | INFO     | . Timing measurements:
[2026-04-13 07:33:18] 2026-04-13 11:15:20,293 | INFO     | . get job = 0 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,293 | INFO     | . initial setup = 2 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,293 | INFO     | . payload setup = 35 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,293 | INFO     | . stage-in = 0 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,294 | INFO     | . payload execution = 46779 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,294 | INFO     | . stage-out = 12 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,294 | INFO     | . log creation = 1 s
[2026-04-13 07:33:18] 2026-04-13 11:15:20,294 | INFO     | ..............................
[2026-04-13 07:33:18] 2026-04-13 11:15:21,437 | INFO     | 
[2026-04-13 07:33:18] 2026-04-13 11:15:21,437 | INFO     | job summary report
[2026-04-13 07:33:18] 2026-04-13 11:15:21,437 | INFO     | --------------------------------------------------
[2026-04-13 07:33:18] 2026-04-13 11:15:21,438 | INFO     | PanDA job id: 7088495414
[2026-04-13 07:33:18] 2026-04-13 11:15:21,438 | INFO     | task id: 49263200
[2026-04-13 07:33:18] 2026-04-13 11:15:21,438 | INFO     | errors: (none)
[2026-04-13 07:33:18] 2026-04-13 11:15:21,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 07:33:18] 2026-04-13 11:15:21,438 | INFO     | pilot state: finished 
[2026-04-13 07:33:18] 2026-04-13 11:15:21,439 | INFO     | transexitcode: 0
[2026-04-13 07:33:18] 2026-04-13 11:15:21,439 | INFO     | exeerrorcode: 0
[2026-04-13 07:33:18] 2026-04-13 11:15:21,439 | INFO     | exeerrordiag: 
[2026-04-13 07:33:18] 2026-04-13 11:15:21,439 | INFO     | exitcode: 0
[2026-04-13 07:33:18] 2026-04-13 11:15:21,439 | INFO     | exitmsg: OK
[2026-04-13 07:33:18] 2026-04-13 11:15:21,444 | INFO     | cpuconsumptiontime: 112925 s
[2026-04-13 07:33:18] 2026-04-13 11:15:21,444 | INFO     | nevents: 400
[2026-04-13 07:33:18] 2026-04-13 11:15:21,444 | INFO     | neventsw: 0
[2026-04-13 07:33:18] 2026-04-13 11:15:21,445 | INFO     | pid: 1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:21,445 | INFO     | pgrp: 1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:21,445 | INFO     | corecount: 8
[2026-04-13 07:33:18] 2026-04-13 11:15:21,445 | INFO     | event service: False
[2026-04-13 07:33:18] 2026-04-13 11:15:21,445 | INFO     | sizes: {0: 2279717, 1: 2279916, 2: 2281574, 13: 2281574, 46819: 2324676, 46833: 2333674, 46835: 2333858, 46841: 2334052}
[2026-04-13 07:33:18] 2026-04-13 11:15:21,446 | INFO     | --------------------------------------------------
[2026-04-13 07:33:18] 2026-04-13 11:15:21,446 | INFO     | 
[2026-04-13 07:33:18] 2026-04-13 11:15:21,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 07:33:18] 2026-04-13 11:15:21,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,685 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 07:33:18] 2026-04-13 11:15:21,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,685 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 07:33:18] 2026-04-13 11:15:21,686 | INFO     | job 7088495414 has completed (purged errors)
[2026-04-13 07:33:18] 2026-04-13 11:15:21,686 | INFO     | overall cleanup function is called
[2026-04-13 07:33:18] 2026-04-13 11:15:22,770 | INFO     | --- collectZombieJob: --- 10, [1271399]
[2026-04-13 07:33:18] 2026-04-13 11:15:22,770 | INFO     | zombie collector waiting for pid 1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:22,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 07:33:18] 2026-04-13 11:15:22,771 | INFO     | collected zombie processes
[2026-04-13 07:33:18] 2026-04-13 11:15:22,771 | INFO     | will attempt to kill all subprocesses of pid=1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:25,994 | INFO     | PID=1255522 has CPU usage=27.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-13 07:33:18] 2026-04-13 11:15:25,995 | INFO     | .. there are 32 such processes running
[2026-04-13 07:33:18] 2026-04-13 11:15:28,090 | INFO     | process IDs to be killed: [1271399] (in reverse order)
[2026-04-13 07:33:18] 2026-04-13 11:15:29,003 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 07:33:18] 2026-04-13 11:15:29,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 07:33:18] 2026-04-13 11:15:29,174 | INFO     | did not find any defunct processes belonging to 1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:29,353 | INFO     | did not find any defunct processes belonging to 1271399
[2026-04-13 07:33:18] 2026-04-13 11:15:29,353 | INFO     | Ready for new job
[2026-04-13 07:33:18] 2026-04-13 11:15:29,375 | INFO     | **************************************
[2026-04-13 07:33:18] 2026-04-13 11:15:29,375 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 07:33:18] 2026-04-13 11:15:29,375 | INFO     | **************************************
[2026-04-13 07:33:18] 2026-04-13 11:15:29,376 | INFO     | 
[2026-04-13 07:33:18] 2026-04-13 11:15:29,423 | INFO     | architecture information:
[2026-04-13 07:33:18] 2026-04-13 11:15:29,427 | INFO     | executing command: cat /etc/os-release
[2026-04-13 07:33:18] 2026-04-13 11:15:29,519 | INFO     | cat /etc/os-release:
[2026-04-13 07:33:18] NAME="CentOS Linux"
[2026-04-13 07:33:18] VERSION="7 (Core)"
[2026-04-13 07:33:18] ID="centos"
[2026-04-13 07:33:18] ID_LIKE="rhel fedora"
[2026-04-13 07:33:18] VERSION_ID="7"
[2026-04-13 07:33:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 07:33:18] ANSI_COLOR="0;31"
[2026-04-13 07:33:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 07:33:18] HOME_URL="https://www.centos.org/"
[2026-04-13 07:33:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 07:33:18] 
[2026-04-13 07:33:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 07:33:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 07:33:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 07:33:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 07:33:18] 
[2026-04-13 07:33:18] 2026-04-13 11:15:29,520 | INFO     | **************************************
[2026-04-13 07:33:18] 2026-04-13 11:15:30,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 07:33:18] 2026-04-13 11:15:30,232 | INFO     | sufficient remaining disk space (93438607360 B)
[2026-04-13 07:33:18] 2026-04-13 11:15:30,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 07:33:18] 2026-04-13 11:15:30,233 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 07:33:18] 2026-04-13 11:15:30,233 | INFO     | update_server=False
[2026-04-13 07:33:18] 2026-04-13 11:15:30,233 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 07:33:18] 2026-04-13 11:15:30,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 07:33:18] 2026-04-13 11:15:30,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 07:33:18] 2026-04-13 11:15:30,697 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 07:33:18] 2026-04-13 11:15:30,701 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 07:33:18] 2026-04-13 11:15:30,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 07:33:18] 2026-04-13 11:15:30,710 | INFO     | will abort loop
[2026-04-13 07:33:18] 2026-04-13 11:15:30,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 07:33:18] 2026-04-13 11:15:30,988 | INFO     | all data control threads have been joined
[2026-04-13 07:33:18] 2026-04-13 11:15:31,240 | INFO     | [job] retrieve thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:31,517 | INFO     | all payload control threads have been joined
[2026-04-13 07:33:18] 2026-04-13 11:15:31,544 | INFO     | [job] queue monitor thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:31,718 | INFO     | [job] job monitor thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:31,819 | INFO     | all job control threads have been joined
[2026-04-13 07:33:18] 2026-04-13 11:15:31,994 | INFO     | [data] control thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,262 | INFO     | [data] copytool_out thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,389 | INFO     | [payload] validate_post thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,397 | INFO     | [payload] failed_post thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,523 | INFO     | [payload] control thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,576 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,582 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,589 | INFO     | [job] validate thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,596 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,603 | INFO     | [data] copytool_in thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:32,824 | INFO     | [job] control thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:34,834 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 07:33:18] 2026-04-13 11:15:58,166 | INFO     | [monitor] cgroup control has ended
[2026-04-13 07:33:18] 2026-04-13 11:15:58,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215825405760)>', '<ExcThread(monitor, started 140215347820288)>']
[2026-04-13 07:33:18] 2026-04-13 11:16:03,614 | INFO     | all workflow threads have been joined
[2026-04-13 07:33:18] 2026-04-13 11:16:03,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 07:33:18] 2026-04-13 11:16:03,618 | INFO     | traces error code: 0
[2026-04-13 07:33:18] 2026-04-13 11:16:03,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 07:33:18] 2026-04-13 11:16:03,701 | INFO     | PID=1255522 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 07:33:18] 2026-04-13 11:16:03,702 | INFO     | .. there are 32 such processes running
[2026-04-13 07:33:18] 2026-04-13 11:16:03,704 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 07:33:18] 2026-04-13 11:16:03,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 07:33:18] 2026-04-13 11:16:03,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 07:33:18] 2026-04-13 11:16:03,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 07:33:18] 2026-04-13 11:16:03,705 | INFO     | [monitor] control thread has ended
[2026-04-13 07:33:18] 2026-04-13 11:16:04,232 [wrapper] ==== pilot stdout END ====
[2026-04-13 07:33:18] 2026-04-13 11:16:04,254 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 07:33:18] 2026-04-13 11:16:04,278 [wrapper] pilotpid: 1255522
[2026-04-13 07:33:18] 2026-04-13 11:16:04,329 [wrapper] Pilot exit status: 0
[2026-04-13 07:33:18] 2026-04-13 11:16:04,453 [wrapper] pandaids: 7088495414 7088495414
[2026-04-13 07:33:18] 2026-04-13 11:16:04,740 [wrapper] cleanup supervisor_pilot 3252598 1255523
[2026-04-13 07:33:18] 2026-04-13 11:16:04,747 [wrapper] Test setup, not cleaning
[2026-04-13 07:33:18] 2026-04-13 11:16:04,753 [wrapper] apfmon messages muted
[2026-04-13 07:33:18] 2026-04-13 11:16:04,759 [wrapper] ==== wrapper stdout END ====
[2026-04-13 07:33:18] 2026-04-13 11:16:04,764 [wrapper] ==== wrapper stderr END ====
[2026-04-13 07:33:18]  *** Error codes and diagnostics ***
[2026-04-13 07:33:18]     "exeErrorCode": 0,
[2026-04-13 07:33:18]     "pilotErrorCode": 0,
[2026-04-13 07:33:18]  *** Listing of results directory ***
[2026-04-13 07:33:18] total 644204
[2026-04-13 07:33:18] drwx------. 5 boincer umatlas      4096 Apr  1 08:07 pilot3
[2026-04-13 07:33:18] -rwx------. 1 boincer umatlas     36322 Apr 12 16:09 runpilot2-wrapper.sh
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas      5094 Apr 12 16:09 queuedata.json
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas    644190 Apr 12 16:10 pilot3.tar.gz
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas       100 Apr 12 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 07:33:18] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 12 17:54 run_atlas
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas       105 Apr 12 17:54 job.xml
[2026-04-13 07:33:18] -rw-r--r--. 3 boincer umatlas 226072121 Apr 12 17:54 EVNT.49263198._001473.pool.root.1
[2026-04-13 07:33:18] -rw-r--r--. 3 boincer umatlas 226072121 Apr 12 17:54 ATLAS.root_0
[2026-04-13 07:33:18] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 17:54 start_atlas.sh
[2026-04-13 07:33:18] drwxrwx--x. 2 boincer umatlas      4096 Apr 12 17:54 shared
[2026-04-13 07:33:18] -rw-r--r--. 2 boincer umatlas    656927 Apr 12 17:54 input.tar.gz
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas         0 Apr 12 17:54 boinc_lockfile
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas      2575 Apr 12 18:13 pandaJob.out
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas        57 Apr 12 18:13 setup.sh.local
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas    997775 Apr 12 18:14 agis_schedconf.cvmfs.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas       443 Apr 12 18:14 workernode_map.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas 196734764 Apr 13 07:11 HITS.49263200._054931.pool.root.1
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas       490 Apr 13 07:11 boinc_task_state.xml
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas      1053 Apr 13 07:14 memory_monitor_summary.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas   1511579 Apr 13 07:15 agis_ddmendpoints.agis.ALL.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas    589327 Apr 13 07:15 log.49263200._054931.job.log.tgz.1
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas      6442 Apr 13 07:15 heartbeat_new.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas      6333 Apr 13 07:15 heartbeat.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas        96 Apr 13 07:16 pilot_heartbeat.json
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas       823 Apr 13 07:16 pilotlog.txt
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas   2769692 Apr 13 07:16 log.49263200._054931.job.log.1
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas       357 Apr 13 07:16 output.list
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas       410 Apr 13 07:16 runtime_log
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas   3379200 Apr 13 07:16 result.tar.gz
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas      9059 Apr 13 07:16 runtime_log.err
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas       790 Apr 13 07:16 fbf4eac49df1.diag
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas      6777 Apr 13 07:27 init_data.xml
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 07:33 boinc_mmap_file
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas     23350 Apr 13 07:33 stderr.txt
[2026-04-13 07:33:18] -rw-r--r--. 1 boincer umatlas        29 Apr 13 07:33 wrapper_checkpoint.txt
[2026-04-13 07:33:18] HITS file was successfully produced:
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas 196734764 Apr 13 07:11 shared/HITS.pool.root.1
[2026-04-13 07:33:18]  *** Contents of shared directory: ***
[2026-04-13 07:33:18] total 416868
[2026-04-13 07:33:18] -rw-r--r--. 3 boincer umatlas 226072121 Apr 12 17:54 ATLAS.root_0
[2026-04-13 07:33:18] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 17:54 start_atlas.sh
[2026-04-13 07:33:18] -rw-r--r--. 2 boincer umatlas    656927 Apr 12 17:54 input.tar.gz
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas 196734764 Apr 13 07:11 HITS.pool.root.1
[2026-04-13 07:33:18] -rw-------. 1 boincer umatlas   3379200 Apr 13 07:16 result.tar.gz
07:33:20 (1233298): run_atlas exited; CPU time 117703.983859
07:33:20 (1233298): called boinc_finish(0)

</stderr_txt>
]]>

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