Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:28:20 (2723983): wrapper (7.7.26015): starting
10:28:20 (2723983): wrapper: running run_atlas (--nthreads 3)
[2026-04-13 10:28:20] Arguments: --nthreads 3
[2026-04-13 10:28:20] Threads: 3
[2026-04-13 10:28:20] Checking for CVMFS
[2026-04-13 10:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 10:28:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 10:28:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 10:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 10:28:21] 2.9.2.0 2104384 3998 79668 158409 0 50 25483130 36864000 0 130560 0 2363988 99.989 148326 13198 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-13 10:28:21] CVMFS is ok
[2026-04-13 10:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 10:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 10:28:21] Further information can be found at the LHC@home message board.
[2026-04-13 10:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 10:28:21] Checking for apptainer binary...
[2026-04-13 10:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-13 10:28:21] Running /usr/bin/apptainer --version
[2026-04-13 10:28:21] apptainer version 1.4.1-1.1
[2026-04-13 10:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 10:28:21] thA385
[2026-04-13 10:28:21] apptainer works
[2026-04-13 10:28:21] Set ATHENA_PROC_NUMBER=3
[2026-04-13 10:28:21] Set ATHENA_CORE_NUMBER=3
[2026-04-13 10:28:21] Starting ATLAS job with PandaID=7088473015
[2026-04-13 10:28:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 11:49:52]  *** The last 200 lines of the pilot log: ***
[2026-04-13 11:49:52] ID_LIKE="rhel fedora"
[2026-04-13 11:49:52] VERSION_ID="7"
[2026-04-13 11:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 11:49:52] ANSI_COLOR="0;31"
[2026-04-13 11:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 11:49:52] HOME_URL="https://www.centos.org/"
[2026-04-13 11:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 11:49:52] 
[2026-04-13 11:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 11:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 11:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 11:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 11:49:52] 
[2026-04-13 11:49:52] 2026-04-13 09:49:21,622 | INFO     | **************************************
[2026-04-13 11:49:52] 2026-04-13 09:49:22,126 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | INFO     | sufficient remaining disk space (379242676224 B)
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | INFO     | update_server=False
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 11:49:52] 2026-04-13 09:49:22,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:49:52] 2026-04-13 09:49:22,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 11:49:52] 2026-04-13 09:49:22,243 | INFO     | all data control threads have been joined
[2026-04-13 11:49:52] 2026-04-13 09:49:22,415 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-13 11:49:52] 2026-04-13 09:49:22,416 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-13 11:49:52] 2026-04-13 09:49:22,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:49:52] 2026-04-13 09:49:22,416 | INFO     | will abort loop
[2026-04-13 11:49:52] 2026-04-13 09:49:22,678 | INFO     | all payload control threads have been joined
[2026-04-13 11:49:52] 2026-04-13 09:49:23,144 | INFO     | [job] retrieve thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,145 | INFO     | [job] queue monitor thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,248 | INFO     | [data] control thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,313 | INFO     | all job control threads have been joined
[2026-04-13 11:49:52] 2026-04-13 09:49:23,421 | INFO     | [job] job monitor thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,622 | INFO     | [payload] validate_post thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,684 | INFO     | [payload] control thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,702 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:23,729 | INFO     | [payload] failed_post thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,050 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,145 | INFO     | [data] copytool_out thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,227 | INFO     | [data] copytool_in thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,318 | INFO     | [job] control thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,483 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:24,586 | INFO     | [job] validate thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:25,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 11:49:52] 2026-04-13 09:49:29,322 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:33,014 | INFO     | job.realtimelogging is not enabled
[2026-04-13 11:49:52] 2026-04-13 09:49:34,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 11:49:52] 2026-04-13 09:49:37,512 | INFO     | [monitor] cgroup control has ended
[2026-04-13 11:49:52] 2026-04-13 09:49:39,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989800503104)>', '<ExcThread(monitor, started 139989090301696)>']
[2026-04-13 11:49:52] 2026-04-13 09:49:44,456 | INFO     | all workflow threads have been joined
[2026-04-13 11:49:52] 2026-04-13 09:49:44,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 11:49:52] 2026-04-13 09:49:44,456 | INFO     | traces error code: 0
[2026-04-13 11:49:52] 2026-04-13 09:49:44,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | INFO     | PID=2728038 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | CRITICAL | thread 'MainThread' is not alive
[2026-04-13 11:49:52] 2026-04-13 09:49:52,679 | INFO     | [monitor] control thread has ended
[2026-04-13 11:49:52] 2026-04-13 09:49:52,726 [wrapper] ==== pilot stdout END ====
[2026-04-13 11:49:52] 2026-04-13 09:49:52,729 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 11:49:52] 2026-04-13 09:49:52,731 [wrapper] pilotpid: 2728038
[2026-04-13 11:49:52] 2026-04-13 09:49:52,734 [wrapper] Pilot exit status: 0
[2026-04-13 11:49:52] 2026-04-13 09:49:52,742 [wrapper] pandaids: 7088473015
[2026-04-13 11:49:52] 2026-04-13 09:49:52,759 [wrapper] cleanup supervisor_pilot 2737607 2728039
[2026-04-13 11:49:52] 2026-04-13 09:49:52,762 [wrapper] Test setup, not cleaning
[2026-04-13 11:49:52] 2026-04-13 09:49:52,764 [wrapper] apfmon messages muted
[2026-04-13 11:49:52] 2026-04-13 09:49:52,767 [wrapper] ==== wrapper stdout END ====
[2026-04-13 11:49:52] 2026-04-13 09:49:52,769 [wrapper] ==== wrapper stderr END ====
[2026-04-13 11:49:52]  *** Error codes and diagnostics ***
[2026-04-13 11:49:52]     "exeErrorCode": 0,
[2026-04-13 11:49:52]     "pilotErrorCode": 0,
[2026-04-13 11:49:52]  *** Listing of results directory ***
[2026-04-13 11:49:52] total 410692
[2026-04-13 11:49:52] -rwx------ 1 boinc boinc     36322 Apr 12 22:09 runpilot2-wrapper.sh
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      5094 Apr 12 22:09 queuedata.json
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc    644190 Apr 12 22:10 pilot3.tar.gz
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc       100 Apr 13 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 11:49:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 10:28 run_atlas
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc       105 Apr 13 10:28 job.xml
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc 224817025 Apr 13 10:28 EVNT.49263198._001463.pool.root.1
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc    656931 Apr 13 10:28 input.tar.gz
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc     15665 Apr 13 10:28 start_atlas.sh
[2026-04-13 11:49:52] drwxrwx--x 2 boinc boinc      4096 Apr 13 10:28 shared
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc         0 Apr 13 10:28 boinc_setup_complete
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      6361 Apr 13 10:28 init_data.xml
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc         0 Apr 13 10:28 boinc_lockfile
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      2576 Apr 13 10:28 pandaJob.out
[2026-04-13 11:49:52] -rw------- 1 boinc boinc    997783 Apr 13 10:28 agis_schedconf.cvmfs.json
[2026-04-13 11:49:52] -rw------- 1 boinc boinc   1511579 Apr 13 10:28 agis_ddmendpoints.agis.ALL.json
[2026-04-13 11:49:52] -rw------- 1 boinc boinc       423 Apr 13 10:28 workernode_map.json
[2026-04-13 11:49:52] drwx------ 5 boinc boinc      4096 Apr 13 10:28 pilot3
[2026-04-13 11:49:52] -rw------- 1 boinc boinc 190279257 Apr 13 11:48 HITS.49263200._054682.pool.root.1
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc       487 Apr 13 11:48 boinc_task_state.xml
[2026-04-13 11:49:52] -rw------- 1 boinc boinc      1033 Apr 13 11:49 memory_monitor_summary.json
[2026-04-13 11:49:52] -rw------- 1 boinc boinc    229086 Apr 13 11:49 log.49263200._054682.job.log.tgz.1
[2026-04-13 11:49:52] -rw------- 1 boinc boinc      6322 Apr 13 11:49 heartbeat_new.json
[2026-04-13 11:49:52] -rw------- 1 boinc boinc      6213 Apr 13 11:49 heartbeat.json
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc        27 Apr 13 11:49 wrapper_checkpoint.txt
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      8192 Apr 13 11:49 boinc_mmap_file
[2026-04-13 11:49:52] -rw------- 1 boinc boinc       817 Apr 13 11:49 pilotlog.txt
[2026-04-13 11:49:52] -rw------- 1 boinc boinc        95 Apr 13 11:49 pilot_heartbeat.json
[2026-04-13 11:49:52] -rw------- 1 boinc boinc    476678 Apr 13 11:49 log.49263200._054682.job.log.1
[2026-04-13 11:49:52] -rw------- 1 boinc boinc       357 Apr 13 11:49 output.list
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc       410 Apr 13 11:49 runtime_log
[2026-04-13 11:49:52] -rw------- 1 boinc boinc    727040 Apr 13 11:49 result.tar.gz
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      8518 Apr 13 11:49 runtime_log.err
[2026-04-13 11:49:52] -rw------- 1 boinc boinc       657 Apr 13 11:49 fbddcfc2dd75.diag
[2026-04-13 11:49:52] -rw-r--r-- 1 boinc boinc      8911 Apr 13 11:49 stderr.txt
[2026-04-13 11:49:52] HITS file was successfully produced:
[2026-04-13 11:49:52] -rw------- 1 boinc boinc 190279257 Apr 13 11:48 shared/HITS.pool.root.1
[2026-04-13 11:49:52]  *** Contents of shared directory: ***
[2026-04-13 11:49:52] total 406744
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc 224817025 Apr 13 10:28 ATLAS.root_0
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc    656931 Apr 13 10:28 input.tar.gz
[2026-04-13 11:49:52] -rw-r--r-- 2 boinc boinc     15665 Apr 13 10:28 start_atlas.sh
[2026-04-13 11:49:52] -rw------- 1 boinc boinc 190279257 Apr 13 11:48 HITS.pool.root.1
[2026-04-13 11:49:52] -rw------- 1 boinc boinc    727040 Apr 13 11:49 result.tar.gz
11:49:54 (2723983): run_atlas exited; CPU time 13607.035199
11:49:54 (2723983): called boinc_finish(0)

</stderr_txt>
]]>

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