Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:45:19 (3987): wrapper (7.7.26015): starting
12:45:19 (3987): wrapper: running run_atlas (--nthreads 5)
[2026-04-12 12:45:19] Arguments: --nthreads 5
[2026-04-12 12:45:19] Threads: 5
[2026-04-12 12:45:19] Checking for CVMFS
[2026-04-12 12:45:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 12:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 12:46:01] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 12:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 12:46:01] 2.13.1.0 4184 0 33408 158386 3 1 4073421 6144000 0 130560 0 0 0.000 1337 76 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-12 12:46:01] CVMFS is ok
[2026-04-12 12:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 12:46:01] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-12 12:46:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-12 12:46:01] Further information can be found at the LHC@home message board.
[2026-04-12 12:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 12:46:01] Checking for apptainer binary...
[2026-04-12 12:46:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 12:46:01] Running /usr/bin/apptainer --version
[2026-04-12 12:46:01] apptainer version 1.4.5
[2026-04-12 12:46:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 12:46:02] riotskates
[2026-04-12 12:46:02] apptainer works
[2026-04-12 12:46:02] Set ATHENA_PROC_NUMBER=5
[2026-04-12 12:46:02] Set ATHENA_CORE_NUMBER=5
[2026-04-12 12:46:02] Starting ATLAS job with PandaID=7072724665
[2026-04-12 12:46:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/userone/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 13:49:52]  *** The last 200 lines of the pilot log: ***
[2026-04-12 13:49:52]  ddmendpoint_alt=None
[2026-04-12 13:49:52]  direct_access_lan=False
[2026-04-12 13:49:52]  direct_access_wan=False
[2026-04-12 13:49:52]  domain=
[2026-04-12 13:49:52]  filesize=237756
[2026-04-12 13:49:52]  filetype=log
[2026-04-12 13:49:52]  guid=b6fd74e9-8f62-4293-ad71-c60fb3d742dd
[2026-04-12 13:49:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-12 13:49:52]  is_altstaged=None
[2026-04-12 13:49:52]  is_tar=False
[2026-04-12 13:49:52]  lfn=log.49263200._011654.job.log.tgz.1
[2026-04-12 13:49:52]  mtime=0
[2026-04-12 13:49:52]  protocol_id=None
[2026-04-12 13:49:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-12 13:49:52]  replicas=None
[2026-04-12 13:49:52]  scope=mc23_13p6TeV
[2026-04-12 13:49:52]  status=None
[2026-04-12 13:49:52]  status_code=0
[2026-04-12 13:49:52]  storage_token=
[2026-04-12 13:49:52]  surl=/home/userone/boinc/slots/1/PanDA_Pilot-7072724665/log.49263200._011654.job.log.tgz.1
[2026-04-12 13:49:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/f5/log.49263200._011654.job.log.tgz.1
[2026-04-12 13:49:52]  workdir=None
[2026-04-12 13:49:52] ]
[2026-04-12 13:49:52] 2026-04-12 18:48:46,865 | INFO     | transferring file log.49263200._011654.job.log.tgz.1 from /home/userone/boinc/slots/1/PanDA_Pilot-7072724665/log.49263200._011654.job.log.tgz.1 to /home/userone/bo
[2026-04-12 13:49:52] 2026-04-12 18:48:46,865 | INFO     | executing command: /usr/bin/env mv /home/userone/boinc/slots/1/PanDA_Pilot-7072724665/log.49263200._011654.job.log.tgz.1 /home/userone/boinc/slots/1/log.49263200._
[2026-04-12 13:49:52] 2026-04-12 18:48:46,883 | INFO     | adding to output.list: log.49263200._011654.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/f5/log.49263200._011654.job.log.tg
[2026-04-12 13:49:52] 2026-04-12 18:48:46,883 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-12 13:49:52] 2026-04-12 18:48:46,883 | INFO     | summary of transferred files:
[2026-04-12 13:49:52] 2026-04-12 18:48:46,883 | INFO     |  -- lfn=log.49263200._011654.job.log.tgz.1, status_code=0, status=transferred
[2026-04-12 13:49:52] 2026-04-12 18:48:46,883 | INFO     | stage-out finished correctly
[2026-04-12 13:49:52] 2026-04-12 18:48:47,935 | INFO     | monitor loop #287: job 0:7072724665 is in state 'finished'
[2026-04-12 13:49:52] 2026-04-12 18:48:47,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,103 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 13:49:52] 2026-04-12 18:48:49,176 | INFO     | job 7072724665 has state=finished
[2026-04-12 13:49:52] 2026-04-12 18:48:49,176 | INFO     | preparing for final server update for job 7072724665 in state='finished'
[2026-04-12 13:49:52] 2026-04-12 18:48:49,176 | INFO     | reading metadata from: /home/userone/boinc/slots/1/PanDA_Pilot-7072724665/jobReport.json
[2026-04-12 13:49:52] 2026-04-12 18:48:49,179 | INFO     | added worker_node to metadata from /home/userone/boinc/slots/1/workernode_map.json
[2026-04-12 13:49:52] 2026-04-12 18:48:49,179 | INFO     | this job has now completed (state=finished)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,179 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,179 | INFO     | log transfer has been attempted: DONE
[2026-04-12 13:49:52] 2026-04-12 18:48:49,179 | INFO     | job 7072724665 has finished - writing final server update
[2026-04-12 13:49:52] 2026-04-12 18:48:49,180 | INFO     | total number of processed events: 400 (read)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,184 | INFO     | using path: /home/userone/boinc/slots/1/PanDA_Pilot-7072724665/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,184 | INFO     | extracted standard info from prmon json
[2026-04-12 13:49:52] 2026-04-12 18:48:49,184 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 13:49:52] 2026-04-12 18:48:49,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 13:49:52] 2026-04-12 18:48:49,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 13:49:52] 2026-04-12 18:48:49,186 | INFO     | fitting pss+swap vs Time
[2026-04-12 13:49:52] 2026-04-12 18:48:49,187 | INFO     | sum of square deviations: 46147842.0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,187 | INFO     | sum of deviations: -6394901267.0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,187 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,187 | INFO     | mean y: 2498039.4150943398
[2026-04-12 13:49:52] 2026-04-12 18:48:49,187 | INFO     | intersect: 2498039.4150943398
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | chi2: 0.11439215682517227
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | current memory leak: -138.57 B/s (using 53 data points, chi2=0.11)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | could have reported an average CPU frequency of 2933 MHz (6 samples)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | ..............................
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | . Timing measurements:
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | . get job = 0 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,188 | INFO     | . initial setup = 9 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | . payload setup = 10 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | . stage-in = 0 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | . payload execution = 3639 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | . stage-out = 0 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | . log creation = 0 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,189 | INFO     | ..............................
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | 
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | job summary report
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | --------------------------------------------------
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | PanDA job id: 7072724665
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | task id: 49263200
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | errors: (none)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | pilot state: finished 
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | transexitcode: 0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | exeerrorcode: 0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,274 | INFO     | exeerrordiag: 
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | exitcode: 0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | exitmsg: OK
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | cpuconsumptiontime: 16969 s
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | nevents: 400
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | neventsw: 0
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | pid: 12761
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | pgrp: 12761
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | corecount: 5
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | event service: False
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | sizes: {0: 2279088, 1: 2281579, 12: 2281579, 3652: 2307364, 3653: 2316427, 3656: 2316749}
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | --------------------------------------------------
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | 
[2026-04-12 13:49:52] 2026-04-12 18:48:49,275 | INFO     | executing command: ls -lF /home/userone/boinc/slots/1
[2026-04-12 13:49:52] 2026-04-12 18:48:49,305 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,307 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 13:49:52] 2026-04-12 18:48:49,308 | INFO     | job 7072724665 has completed (purged errors)
[2026-04-12 13:49:52] 2026-04-12 18:48:49,308 | INFO     | overall cleanup function is called
[2026-04-12 13:49:52] 2026-04-12 18:48:50,316 | INFO     | --- collectZombieJob: --- 10, [12761]
[2026-04-12 13:49:52] 2026-04-12 18:48:50,316 | INFO     | zombie collector waiting for pid 12761
[2026-04-12 13:49:52] 2026-04-12 18:48:50,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 13:49:52] 2026-04-12 18:48:50,316 | INFO     | collected zombie processes
[2026-04-12 13:49:52] 2026-04-12 18:48:50,316 | INFO     | will attempt to kill all subprocesses of pid=12761
[2026-04-12 13:49:52] 2026-04-12 18:48:50,399 | INFO     | process IDs to be killed: [12761] (in reverse order)
[2026-04-12 13:49:52] 2026-04-12 18:48:50,439 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 13:49:52] 2026-04-12 18:48:50,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 13:49:52] 2026-04-12 18:48:50,441 | INFO     | did not find any defunct processes belonging to 12761
[2026-04-12 13:49:52] 2026-04-12 18:48:50,442 | INFO     | did not find any defunct processes belonging to 12761
[2026-04-12 13:49:52] 2026-04-12 18:48:50,442 | INFO     | Ready for new job
[2026-04-12 13:49:52] 2026-04-12 18:48:50,443 | INFO     | **************************************
[2026-04-12 13:49:52] 2026-04-12 18:48:50,443 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 13:49:52] 2026-04-12 18:48:50,443 | INFO     | **************************************
[2026-04-12 13:49:52] 2026-04-12 18:48:50,443 | INFO     | 
[2026-04-12 13:49:52] 2026-04-12 18:48:50,444 | INFO     | architecture information:
[2026-04-12 13:49:52] 2026-04-12 18:48:50,444 | INFO     | executing command: cat /etc/os-release
[2026-04-12 13:49:52] 2026-04-12 18:48:50,456 | INFO     | cat /etc/os-release:
[2026-04-12 13:49:52] NAME="CentOS Linux"
[2026-04-12 13:49:52] VERSION="7 (Core)"
[2026-04-12 13:49:52] ID="centos"
[2026-04-12 13:49:52] ID_LIKE="rhel fedora"
[2026-04-12 13:49:52] VERSION_ID="7"
[2026-04-12 13:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 13:49:52] ANSI_COLOR="0;31"
[2026-04-12 13:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 13:49:52] HOME_URL="https://www.centos.org/"
[2026-04-12 13:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 13:49:52] 
[2026-04-12 13:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 13:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 13:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 13:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 13:49:52] 
[2026-04-12 13:49:52] 2026-04-12 18:48:50,456 | INFO     | **************************************
[2026-04-12 13:49:52] 2026-04-12 18:48:50,959 | INFO     | executing command: df -mP /home/userone/boinc/slots/1
[2026-04-12 13:49:52] 2026-04-12 18:48:50,979 | INFO     | sufficient remaining disk space (2498515435520 B)
[2026-04-12 13:49:52] 2026-04-12 18:48:50,979 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 13:49:52] 2026-04-12 18:48:50,980 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 13:49:52] 2026-04-12 18:48:50,980 | INFO     | update_server=False
[2026-04-12 13:49:52] 2026-04-12 18:48:50,980 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 13:49:52] 2026-04-12 18:48:50,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 13:49:52] 2026-04-12 18:48:50,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 13:49:52] 2026-04-12 18:48:51,282 | INFO     | all job control threads have been joined
[2026-04-12 13:49:52] 2026-04-12 18:48:51,339 | INFO     | all data control threads have been joined
[2026-04-12 13:49:52] 2026-04-12 18:48:51,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 13:49:52] 2026-04-12 18:48:51,445 | INFO     | aborting loop
[2026-04-12 13:49:52] 2026-04-12 18:48:51,985 | INFO     | [job] retrieve thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:51,986 | INFO     | [job] queue monitor thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,011 | INFO     | [job] validate thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,096 | INFO     | [payload] validate_post thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,212 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,288 | INFO     | [job] control thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,344 | INFO     | [data] control thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,393 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,413 | INFO     | all payload control threads have been joined
[2026-04-12 13:49:52] 2026-04-12 18:48:52,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 13:49:52] 2026-04-12 18:48:52,451 | INFO     | [job] job monitor thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,479 | INFO     | [data] copytool_in thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:52,878 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:53,124 | INFO     | [payload] failed_post thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:53,419 | INFO     | [payload] control thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:54,440 | INFO     | [data] copytool_out thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:48:54,984 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:49:01,611 | INFO     | job.realtimelogging is not enabled
[2026-04-12 13:49:52] 2026-04-12 18:49:02,617 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 13:49:52] 2026-04-12 18:49:21,588 | INFO     | PID=8336 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-12 13:49:52] 2026-04-12 18:49:21,589 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 13:49:52] 2026-04-12 18:49:21,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 13:49:52] 2026-04-12 18:49:21,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 13:49:52] 2026-04-12 18:49:45,722 | INFO     | [monitor] cgroup control has ended
[2026-04-12 13:49:52] 2026-04-12 18:49:47,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723841480512)>', '<ExcThread(monitor, started 139723087517440)>']
[2026-04-12 13:49:52] 2026-04-12 18:49:47,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 13:49:52] 2026-04-12 18:49:47,723 | INFO     | [monitor] control thread has ended
[2026-04-12 13:49:52] 2026-04-12 18:49:52,504 | INFO     | all workflow threads have been joined
[2026-04-12 13:49:52] 2026-04-12 18:49:52,504 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 13:49:52] 2026-04-12 18:49:52,505 | INFO     | traces error code: 0
[2026-04-12 13:49:52] 2026-04-12 18:49:52,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 13:49:52] 2026-04-12 18:49:52,596 [wrapper] ==== pilot stdout END ====
[2026-04-12 13:49:52] 2026-04-12 18:49:52,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 13:49:52] 2026-04-12 18:49:52,603 [wrapper] pilotpid: 8336
[2026-04-12 13:49:52] 2026-04-12 18:49:52,607 [wrapper] Pilot exit status: 0
[2026-04-12 13:49:52] 2026-04-12 18:49:52,621 [wrapper] pandaids: 7072724665
[2026-04-12 13:49:52] 2026-04-12 18:49:52,660 [wrapper] cleanup supervisor_pilot   17841 8337
[2026-04-12 13:49:52] 2026-04-12 18:49:52,662 [wrapper] Test setup, not cleaning
[2026-04-12 13:49:52] 2026-04-12 18:49:52,666 [wrapper] apfmon messages muted
[2026-04-12 13:49:52] 2026-04-12 18:49:52,669 [wrapper] ==== wrapper stdout END ====
[2026-04-12 13:49:52] 2026-04-12 18:49:52,672 [wrapper] ==== wrapper stderr END ====
[2026-04-12 13:49:52]  *** Error codes and diagnostics ***
[2026-04-12 13:49:52]     "exeErrorCode": 0,
[2026-04-12 13:49:52]     "pilotErrorCode": 0,
[2026-04-12 13:49:52]  *** Listing of results directory ***
[2026-04-12 13:49:52] total 413220
[2026-04-12 13:49:52] -rwx------ 1 userone userone     36322 Mar 31 15:55 runpilot2-wrapper.sh
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone    644190 Apr 10 06:49 pilot3.tar.gz
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone      5094 Apr 11 03:41 queuedata.json
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone       100 Apr 12 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 13:49:52] -rwxr-xr-x 1 userone userone      7986 Apr 12 12:45 run_atlas
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone       105 Apr 12 12:45 job.xml
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone 224790452 Apr 12 12:45 EVNT.49263198._000467.pool.root.1
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone    656933 Apr 12 12:45 input.tar.gz
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone     15665 Apr 12 12:45 start_atlas.sh
[2026-04-12 13:49:52] drwxrwx--x 2 userone userone        84 Apr 12 12:45 shared
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone         0 Apr 12 12:45 boinc_setup_complete
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone      6356 Apr 12 12:45 init_data.xml
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone         0 Apr 12 12:45 boinc_lockfile
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone      2575 Apr 12 12:46 pandaJob.out
[2026-04-12 13:49:52] -rw------- 1 userone userone    997759 Apr 12 12:47 agis_schedconf.cvmfs.json
[2026-04-12 13:49:52] -rw------- 1 userone userone   1511579 Apr 12 12:47 agis_ddmendpoints.agis.ALL.json
[2026-04-12 13:49:52] -rw------- 1 userone userone       427 Apr 12 12:47 workernode_map.json
[2026-04-12 13:49:52] drwx------ 5 userone userone      4096 Apr 12 12:47 pilot3
[2026-04-12 13:49:52] -rw------- 1 userone userone 193072065 Apr 12 13:48 HITS.49263200._011654.pool.root.1
[2026-04-12 13:49:52] -rw------- 1 userone userone      1021 Apr 12 13:48 memory_monitor_summary.json
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone       487 Apr 12 13:48 boinc_task_state.xml
[2026-04-12 13:49:52] -rw------- 1 userone userone    237756 Apr 12 13:48 log.49263200._011654.job.log.tgz.1
[2026-04-12 13:49:52] -rw------- 1 userone userone      6350 Apr 12 13:48 heartbeat_new.json
[2026-04-12 13:49:52] -rw------- 1 userone userone      6241 Apr 12 13:48 heartbeat.json
[2026-04-12 13:49:52] -rw------- 1 userone userone        95 Apr 12 13:49 pilot_heartbeat.json
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone      8192 Apr 12 13:49 boinc_mmap_file
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone        27 Apr 12 13:49 wrapper_checkpoint.txt
[2026-04-12 13:49:52] -rw------- 1 userone userone      4819 Apr 12 13:49 pilotlog.txt
[2026-04-12 13:49:52] -rw------- 1 userone userone    376539 Apr 12 13:49 log.49263200._011654.job.log.1
[2026-04-12 13:49:52] -rw------- 1 userone userone       357 Apr 12 13:49 output.list
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone       410 Apr 12 13:49 runtime_log
[2026-04-12 13:49:52] -rw------- 1 userone userone    634880 Apr 12 13:49 result.tar.gz
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone      8487 Apr 12 13:49 runtime_log.err
[2026-04-12 13:49:52] -rw------- 1 userone userone       648 Apr 12 13:49 34d9634f988f.diag
[2026-04-12 13:49:52] -rw-r--r-- 1 userone userone     20861 Apr 12 13:49 stderr.txt
[2026-04-12 13:49:52] HITS file was successfully produced:
[2026-04-12 13:49:52] -rw------- 1 userone userone 193072065 Apr 12 13:48 shared/HITS.pool.root.1
[2026-04-12 13:49:52]  *** Contents of shared directory: ***
[2026-04-12 13:49:52] total 409352
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone 224790452 Apr 12 12:45 ATLAS.root_0
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone    656933 Apr 12 12:45 input.tar.gz
[2026-04-12 13:49:52] -rw-r--r-- 2 userone userone     15665 Apr 12 12:45 start_atlas.sh
[2026-04-12 13:49:52] -rw------- 1 userone userone 193072065 Apr 12 13:48 HITS.pool.root.1
[2026-04-12 13:49:52] -rw------- 1 userone userone    634880 Apr 12 13:49 result.tar.gz
13:49:54 (3987): run_atlas exited; CPU time 16987.839865
13:49:54 (3987): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN