Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:54:40 (29770): wrapper (7.7.26015): starting
17:54:40 (29770): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 17:54:40] Arguments: --nthreads 8
[2026-04-12 17:54:40] Threads: 8
[2026-04-12 17:54:40] Checking for CVMFS
[2026-04-12 17:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 17:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 17:54:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 17:54:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 17:54:41] 2.11.0.0 5673 5815 59904 158384 1 1 2928248 4096001 0 130560 0 876882 99.241 865750 318 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-12 17:54:41] CVMFS is ok
[2026-04-12 17:54:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 17:54:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 17:54:41] Further information can be found at the LHC@home message board.
[2026-04-12 17:54:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 17:54:41] Checking for apptainer binary...
[2026-04-12 17:54:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-12 17:54:41] apptainer is not installed, using version from CVMFS
[2026-04-12 17:54:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 17:54:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_11494052/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node414
[2026-04-12 17:54:41] apptainer works
[2026-04-12 17:54:41] Set ATHENA_PROC_NUMBER=8
[2026-04-12 17:54:41] Set ATHENA_CORE_NUMBER=8
[2026-04-12 17:54:41] Starting ATLAS job with PandaID=7088077730
[2026-04-12 17:54:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11494052/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 18:56:24]  *** The last 200 lines of the pilot log: ***
[2026-04-12 18:56:24]  filetype=log
[2026-04-12 18:56:24]  guid=2c0327a6-1151-400e-bfa9-a0d63e4536c7
[2026-04-12 18:56:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-12 18:56:24]  is_altstaged=None
[2026-04-12 18:56:24]  is_tar=False
[2026-04-12 18:56:24]  lfn=log.49645815._007809.job.log.tgz.1
[2026-04-12 18:56:24]  mtime=0
[2026-04-12 18:56:24]  protocol_id=None
[2026-04-12 18:56:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-12 18:56:24]  replicas=None
[2026-04-12 18:56:24]  scope=mc23_13p6TeV
[2026-04-12 18:56:24]  status=None
[2026-04-12 18:56:24]  status_code=0
[2026-04-12 18:56:24]  storage_token=
[2026-04-12 18:56:24]  surl=/tmp/job_11494052/atlas/pilot/slots/0/PanDA_Pilot-7088077730/log.49645815._007809.job.log.tgz.1
[2026-04-12 18:56:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/da/log.49645815._007809.job.log.tgz.1
[2026-04-12 18:56:24]  workdir=None
[2026-04-12 18:56:24] ]
[2026-04-12 18:56:24] 2026-04-12 16:56:01,885 | INFO     | transferring file log.49645815._007809.job.log.tgz.1 from /tmp/job_11494052/atlas/pilot/slots/0/PanDA_Pilot-7088077730/log.49645815._007809.job.log.tgz.1 to /tmp/j
[2026-04-12 18:56:24] 2026-04-12 16:56:01,885 | INFO     | executing command: /usr/bin/env mv /tmp/job_11494052/atlas/pilot/slots/0/PanDA_Pilot-7088077730/log.49645815._007809.job.log.tgz.1 /tmp/job_11494052/atlas/pilot/sl
[2026-04-12 18:56:24] 2026-04-12 16:56:01,893 | INFO     | adding to output.list: log.49645815._007809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/da/log.49645815._007809.job.log.tg
[2026-04-12 18:56:24] 2026-04-12 16:56:01,893 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-12 18:56:24] 2026-04-12 16:56:01,893 | INFO     | summary of transferred files:
[2026-04-12 18:56:24] 2026-04-12 16:56:01,893 | INFO     |  -- lfn=log.49645815._007809.job.log.tgz.1, status_code=0, status=transferred
[2026-04-12 18:56:24] 2026-04-12 16:56:01,893 | INFO     | stage-out finished correctly
[2026-04-12 18:56:24] 2026-04-12 16:56:02,620 | INFO     | PID=2277 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-12 18:56:24] 2026-04-12 16:56:02,620 | INFO     | .. there are 5 such processes running
[2026-04-12 18:56:24] 2026-04-12 16:56:04,629 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 18:56:24] 2026-04-12 16:56:05,572 | INFO     | job 7088077730 has state=finished
[2026-04-12 18:56:24] 2026-04-12 16:56:05,572 | INFO     | preparing for final server update for job 7088077730 in state='finished'
[2026-04-12 18:56:24] 2026-04-12 16:56:05,572 | INFO     | reading metadata from: /tmp/job_11494052/atlas/pilot/slots/0/PanDA_Pilot-7088077730/jobReport.json
[2026-04-12 18:56:24] 2026-04-12 16:56:05,573 | INFO     | added worker_node to metadata from /tmp/job_11494052/atlas/pilot/slots/0/workernode_map.json
[2026-04-12 18:56:24] 2026-04-12 16:56:05,574 | INFO     | this job has now completed (state=finished)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,574 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,574 | INFO     | log transfer has been attempted: DONE
[2026-04-12 18:56:24] 2026-04-12 16:56:05,574 | INFO     | job 7088077730 has finished - writing final server update
[2026-04-12 18:56:24] 2026-04-12 16:56:05,574 | INFO     | total number of processed events: 400 (read)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,592 | INFO     | using path: /tmp/job_11494052/atlas/pilot/slots/0/PanDA_Pilot-7088077730/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,592 | INFO     | extracted standard info from prmon json
[2026-04-12 18:56:24] 2026-04-12 16:56:05,592 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 18:56:24] 2026-04-12 16:56:05,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 18:56:24] 2026-04-12 16:56:05,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 18:56:24] 2026-04-12 16:56:05,593 | INFO     | fitting pss+swap vs Time
[2026-04-12 18:56:24] 2026-04-12 16:56:05,593 | INFO     | sum of square deviations: 46147842.0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | sum of deviations: -304553785.0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | mean x (centered): 0.0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | mean y: 2525671.169811321
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | intersect: 2525671.169811321
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | chi2: 0.0015790885321307264
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | current memory leak: -6.60 B/s (using 53 data points, chi2=0.00)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | ..............................
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . Timing measurements:
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . get job = 0 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . initial setup = 2 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . payload setup = 3 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . stage-in = 0 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . payload execution = 3640 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . stage-out = 0 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | . log creation = 0 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,594 | INFO     | ..............................
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | 
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | job summary report
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | --------------------------------------------------
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | PanDA job id: 7088077730
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | task id: 49645815
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | errors: (none)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | pilot state: finished 
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | transexitcode: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | exeerrorcode: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | exeerrordiag: 
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | exitcode: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | exitmsg: OK
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | cpuconsumptiontime: 26319 s
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | nevents: 400
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | neventsw: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | pid: 15630
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | pgrp: 15630
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | corecount: 8
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | event service: False
[2026-04-12 18:56:24] 2026-04-12 16:56:05,643 | INFO     | sizes: {0: 2281690, 11: 2281690, 3647: 2307592, 3648: 2316675, 3651: 2316675, 3652: 2316869}
[2026-04-12 18:56:24] 2026-04-12 16:56:05,644 | INFO     | --------------------------------------------------
[2026-04-12 18:56:24] 2026-04-12 16:56:05,644 | INFO     | 
[2026-04-12 18:56:24] 2026-04-12 16:56:05,644 | INFO     | executing command: ls -lF /tmp/job_11494052/atlas/pilot/slots/0
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | job 7088077730 has completed (purged errors)
[2026-04-12 18:56:24] 2026-04-12 16:56:05,655 | INFO     | overall cleanup function is called
[2026-04-12 18:56:24] 2026-04-12 16:56:06,661 | INFO     | --- collectZombieJob: --- 10, [15630]
[2026-04-12 18:56:24] 2026-04-12 16:56:06,661 | INFO     | zombie collector waiting for pid 15630
[2026-04-12 18:56:24] 2026-04-12 16:56:06,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 18:56:24] 2026-04-12 16:56:06,661 | INFO     | collected zombie processes
[2026-04-12 18:56:24] 2026-04-12 16:56:06,661 | INFO     | will attempt to kill all subprocesses of pid=15630
[2026-04-12 18:56:24] 2026-04-12 16:56:06,765 | INFO     | process IDs to be killed: [15630] (in reverse order)
[2026-04-12 18:56:24] 2026-04-12 16:56:06,804 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 18:56:24] 2026-04-12 16:56:06,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 18:56:24] 2026-04-12 16:56:06,808 | INFO     | did not find any defunct processes belonging to 15630
[2026-04-12 18:56:24] 2026-04-12 16:56:06,811 | INFO     | did not find any defunct processes belonging to 15630
[2026-04-12 18:56:24] 2026-04-12 16:56:06,811 | INFO     | Ready for new job
[2026-04-12 18:56:24] 2026-04-12 16:56:06,811 | INFO     | **************************************
[2026-04-12 18:56:24] 2026-04-12 16:56:06,811 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 18:56:24] 2026-04-12 16:56:06,812 | INFO     | **************************************
[2026-04-12 18:56:24] 2026-04-12 16:56:06,812 | INFO     | 
[2026-04-12 18:56:24] 2026-04-12 16:56:06,826 | INFO     | architecture information:
[2026-04-12 18:56:24] 2026-04-12 16:56:06,826 | INFO     | executing command: cat /etc/os-release
[2026-04-12 18:56:24] 2026-04-12 16:56:06,831 | INFO     | cat /etc/os-release:
[2026-04-12 18:56:24] NAME="CentOS Linux"
[2026-04-12 18:56:24] VERSION="7 (Core)"
[2026-04-12 18:56:24] ID="centos"
[2026-04-12 18:56:24] ID_LIKE="rhel fedora"
[2026-04-12 18:56:24] VERSION_ID="7"
[2026-04-12 18:56:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 18:56:24] ANSI_COLOR="0;31"
[2026-04-12 18:56:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 18:56:24] HOME_URL="https://www.centos.org/"
[2026-04-12 18:56:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 18:56:24] 
[2026-04-12 18:56:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 18:56:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 18:56:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 18:56:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 18:56:24] 
[2026-04-12 18:56:24] 2026-04-12 16:56:06,831 | INFO     | **************************************
[2026-04-12 18:56:24] 2026-04-12 16:56:06,984 | WARNING  | process 15630 can no longer be monitored (due to stat problems) - aborting
[2026-04-12 18:56:24] 2026-04-12 16:56:07,064 | INFO     | using path: /tmp/job_11494052/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 18:56:24] 2026-04-12 16:56:07,162 | INFO     | number of running child processes to parent process 15630: 1
[2026-04-12 18:56:24] 2026-04-12 16:56:07,162 | INFO     | maximum number of monitored processes: 6
[2026-04-12 18:56:24] 2026-04-12 16:56:07,162 | INFO     | aborting job monitoring since job object (job id=7088077730) has expired
[2026-04-12 18:56:24] 2026-04-12 16:56:07,334 | INFO     | executing command: df -mP /tmp/job_11494052/atlas/pilot/slots/0
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | INFO     | sufficient remaining disk space (225569669120 B)
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | INFO     | update_server=False
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 18:56:24] 2026-04-12 16:56:07,341 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-12 18:56:24] 2026-04-12 16:56:07,342 | INFO     | will abort loop
[2026-04-12 18:56:24] 2026-04-12 16:56:07,342 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 18:56:24] 2026-04-12 16:56:07,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 18:56:24] 2026-04-12 16:56:07,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 18:56:24] 2026-04-12 16:56:07,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 18:56:24] 2026-04-12 16:56:08,078 | INFO     | [monitor] cgroup control has ended
[2026-04-12 18:56:24] 2026-04-12 16:56:08,122 | INFO     | all data control threads have been joined
[2026-04-12 18:56:24] 2026-04-12 16:56:08,346 | INFO     | [job] retrieve thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:08,347 | INFO     | [job] queue monitor thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:08,347 | INFO     | [job] job monitor thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:08,387 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:08,467 | INFO     | [data] copytool_in thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:08,748 | INFO     | all job control threads have been joined
[2026-04-12 18:56:24] 2026-04-12 16:56:08,761 | INFO     | all payload control threads have been joined
[2026-04-12 18:56:24] 2026-04-12 16:56:08,891 | INFO     | [payload] validate_post thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,128 | INFO     | [data] control thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,457 | INFO     | [data] copytool_out thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,458 | INFO     | [job] validate thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,474 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,599 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,754 | INFO     | [job] control thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,766 | INFO     | [payload] control thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:09,857 | INFO     | [payload] failed_post thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:10,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 18:56:24] 2026-04-12 16:56:14,686 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:18,168 | INFO     | job.realtimelogging is not enabled
[2026-04-12 18:56:24] 2026-04-12 16:56:19,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 18:56:24] 2026-04-12 16:56:19,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-04-12 18:56:24] 2026-04-12 16:56:19,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 18:56:24] 2026-04-12 16:56:19,401 | INFO     | [monitor] control thread has ended
[2026-04-12 18:56:24] 2026-04-12 16:56:24,334 | INFO     | all workflow threads have been joined
[2026-04-12 18:56:24] 2026-04-12 16:56:24,334 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 18:56:24] 2026-04-12 16:56:24,334 | INFO     | traces error code: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:24,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 18:56:24] 2026-04-12 16:56:24,388 [wrapper] ==== pilot stdout END ====
[2026-04-12 18:56:24] 2026-04-12 16:56:24,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 18:56:24] 2026-04-12 16:56:24,390 [wrapper] pilotpid: 2277
[2026-04-12 18:56:24] 2026-04-12 16:56:24,391 [wrapper] Pilot exit status: 0
[2026-04-12 18:56:24] 2026-04-12 16:56:24,395 [wrapper] pandaids: 7088077730
[2026-04-12 18:56:24] 2026-04-12 16:56:24,419 [wrapper] cleanup supervisor_pilot  7909 2278
[2026-04-12 18:56:24] 2026-04-12 16:56:24,420 [wrapper] Test setup, not cleaning
[2026-04-12 18:56:24] 2026-04-12 16:56:24,421 [wrapper] apfmon messages muted
[2026-04-12 18:56:24] 2026-04-12 16:56:24,422 [wrapper] ==== wrapper stdout END ====
[2026-04-12 18:56:24] 2026-04-12 16:56:24,423 [wrapper] ==== wrapper stderr END ====
[2026-04-12 18:56:24]  *** Error codes and diagnostics ***
[2026-04-12 18:56:24]     "exeErrorCode": 0,
[2026-04-12 18:56:24]     "pilotErrorCode": 0,
[2026-04-12 18:56:24]  *** Listing of results directory ***
[2026-04-12 18:56:24] total 417164
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    644190 Apr 12 13:16 pilot3.tar.gz
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      5094 Apr 12 13:16 queuedata.json
[2026-04-12 18:56:24] -rwx------ 1 mf493845 unix-user     36322 Apr 12 13:16 runpilot2-wrapper.sh
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       100 Apr 12 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 18:56:24] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 12 16:57 run_atlas
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       105 Apr 12 16:57 job.xml
[2026-04-12 18:56:24] drwxrwx--x 2 mf493845 unix-user       100 Apr 12 17:54 shared
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user    656941 Apr 12 17:54 input.tar.gz
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user 222711146 Apr 12 17:54 EVNT.48629115._000313.pool.root.1
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 12 17:54 start_atlas.sh
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      6306 Apr 12 17:54 init_data.xml
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user         0 Apr 12 17:54 boinc_setup_complete
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      8192 Apr 12 17:54 boinc_mmap_file
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user         0 Apr 12 17:54 boinc_lockfile
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      2627 Apr 12 17:54 pandaJob.out
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    997759 Apr 12 17:54 agis_schedconf.cvmfs.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user   1511579 Apr 12 17:54 agis_ddmendpoints.agis.ALL.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       416 Apr 12 17:55 workernode_map.json
[2026-04-12 18:56:24] drwx------ 5 mf493845 unix-user       480 Apr 12 17:55 pilot3
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user 199075468 Apr 12 18:55 HITS.49645815._007809.pool.root.1
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user        95 Apr 12 18:55 pilot_heartbeat.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      1015 Apr 12 18:55 memory_monitor_summary.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    287980 Apr 12 18:56 log.49645815._007809.job.log.tgz.1
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      6326 Apr 12 18:56 heartbeat_new.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      6216 Apr 12 18:56 heartbeat.json
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      5165 Apr 12 18:56 pilotlog.txt
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    392491 Apr 12 18:56 log.49645815._007809.job.log.1
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       357 Apr 12 18:56 output.list
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       410 Apr 12 18:56 runtime_log
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    696320 Apr 12 18:56 result.tar.gz
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user      8841 Apr 12 18:56 runtime_log.err
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user       645 Apr 12 18:56 7f22b32b2a12.diag
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user     21734 Apr 12 18:56 stderr.txt
[2026-04-12 18:56:24] HITS file was successfully produced:
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user 199075468 Apr 12 18:55 shared/HITS.pool.root.1
[2026-04-12 18:56:24]  *** Contents of shared directory: ***
[2026-04-12 18:56:24] total 413244
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user    656941 Apr 12 17:54 input.tar.gz
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user 222711146 Apr 12 17:54 ATLAS.root_0
[2026-04-12 18:56:24] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 12 17:54 start_atlas.sh
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user 199075468 Apr 12 18:55 HITS.pool.root.1
[2026-04-12 18:56:24] -rw------- 1 mf493845 unix-user    696320 Apr 12 18:56 result.tar.gz
18:56:26 (29770): run_atlas exited; CPU time 26378.242395
18:56:26 (29770): called boinc_finish(0)

</stderr_txt>
]]>

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