Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:34 (607381): wrapper (7.7.26015): starting
09:50:34 (607381): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 09:50:34] Arguments: --nthreads 8
[2026-04-12 09:50:34] Threads: 8
[2026-04-12 09:50:34] Checking for CVMFS
[2026-04-12 09:50:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 09:50:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 09:50:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 09:50:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 09:50:36] 2.13.3.0 15551 225711 302596 158380 1 283 28700388 32935936 12263 16776704 0 544534750 99.488 791566119 38883 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-12 09:50:36] CVMFS is ok
[2026-04-12 09:50:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 09:50:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 09:50:36] Further information can be found at the LHC@home message board.
[2026-04-12 09:50:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 09:50:36] Checking for apptainer binary...
[2026-04-12 09:50:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 09:50:36] Running /usr/bin/apptainer --version
[2026-04-12 09:50:36] apptainer version 1.4.5-2.el9
[2026-04-12 09:50:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 09:50:36] c6-5-7-3.aglt2.org
[2026-04-12 09:50:36] apptainer works
[2026-04-12 09:50:36] Set ATHENA_PROC_NUMBER=8
[2026-04-12 09:50:36] Set ATHENA_CORE_NUMBER=8
[2026-04-12 09:50:37] Starting ATLAS job with PandaID=7082810402
[2026-04-12 09:50:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 12:29:57]  *** The last 200 lines of the pilot log: ***
[2026-04-12 12:29:57] 2026-04-12 16:29:14,034 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 12:29:57] 2026-04-12 16:29:14,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 12:29:57] 2026-04-12 16:29:14,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 12:29:57] 2026-04-12 16:29:14,037 | INFO     | fitting pss+swap vs Time
[2026-04-12 12:29:57] 2026-04-12 16:29:14,037 | INFO     | sum of square deviations: 1132484683.9740286
[2026-04-12 12:29:57] 2026-04-12 16:29:14,038 | INFO     | sum of deviations: 15946756914.688322
[2026-04-12 12:29:57] 2026-04-12 16:29:14,038 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,038 | INFO     | mean y: 2486527.6558441557
[2026-04-12 12:29:57] 2026-04-12 16:29:14,038 | INFO     | intersect: 2486527.6558441557
[2026-04-12 12:29:57] 2026-04-12 16:29:14,039 | INFO     | chi2: 1.6265105177224417
[2026-04-12 12:29:57] 2026-04-12 16:29:14,039 | INFO     | sum of square deviations: 1025725683.208056
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | sum of deviations: 15400819724.21476
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | mean y: 2485747.11409396
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | intersect: 2485747.11409396
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | chi2: 1.628591304000201
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | current chi2=1.628591304000201 (change=-0.12792946956610363 %)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | right removable region: 148
[2026-04-12 12:29:57] 2026-04-12 16:29:14,040 | INFO     | sum of square deviations: 1025695795.1140915
[2026-04-12 12:29:57] 2026-04-12 16:29:14,041 | INFO     | sum of deviations: -6061292597.852349
[2026-04-12 12:29:57] 2026-04-12 16:29:14,041 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,041 | INFO     | mean y: 2517411.744966443
[2026-04-12 12:29:57] 2026-04-12 16:29:14,041 | INFO     | intersect: 2517411.744966443
[2026-04-12 12:29:57] 2026-04-12 16:29:14,042 | INFO     | chi2: 0.12007985522939857
[2026-04-12 12:29:57] 2026-04-12 16:29:14,042 | INFO     | current chi2=0.12007985522939857 (change=92.61733300086229 %)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,042 | INFO     | sum of square deviations: 925855446.8263888
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | sum of deviations: 975167384.173611
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | mean y: 2506636.965277778
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | intersect: 2506636.965277778
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | chi2: 0.048622668563066275
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | current chi2=0.048622668563066275 (change=59.50805531021142 %)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,043 | INFO     | sum of square deviations: 832695330.3453236
[2026-04-12 12:29:57] 2026-04-12 16:29:14,044 | INFO     | sum of deviations: 3726079685.733813
[2026-04-12 12:29:57] 2026-04-12 16:29:14,044 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,044 | INFO     | mean y: 2502253.3021582733
[2026-04-12 12:29:57] 2026-04-12 16:29:14,044 | INFO     | intersect: 2502253.3021582733
[2026-04-12 12:29:57] 2026-04-12 16:29:14,045 | INFO     | chi2: 0.0008262179120809486
[2026-04-12 12:29:57] 2026-04-12 16:29:14,045 | INFO     | current chi2=0.0008262179120809486 (change=98.30075572464868 %)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,045 | INFO     | sum of square deviations: 746017287.5223856
[2026-04-12 12:29:57] 2026-04-12 16:29:14,045 | INFO     | sum of deviations: 3115918626.3582106
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | mean y: 2503325.9552238807
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | intersect: 2503325.9552238807
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | chi2: 0.0007212095819757413
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | current chi2=0.0007212095819757413 (change=12.709519918386757 %)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | left removable region: 20
[2026-04-12 12:29:57] 2026-04-12 16:29:14,046 | INFO     | sum of square deviations: 650221877.5
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | sum of deviations: 2939660166.3125
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | mean x (centered): 0.0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | mean y: 2502987.0859375
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | intersect: 2502987.0859375
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | chi2: 0.0006219227761805831
[2026-04-12 12:29:57] 2026-04-12 16:29:14,047 | INFO     | current memory leak: 4.52 B/s (using 128 data points, chi2=0.00)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | could have reported an average CPU frequency of 2967 MHz (9 samples)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | ..............................
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . Timing measurements:
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . get job = 0 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . initial setup = 25 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . payload setup = 38 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . stage-in = 0 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . payload execution = 9396 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,048 | INFO     | . stage-out = 1 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,049 | INFO     | . log creation = 0 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,049 | INFO     | ..............................
[2026-04-12 12:29:57] 2026-04-12 16:29:14,130 | INFO     | 
[2026-04-12 12:29:57] 2026-04-12 16:29:14,130 | INFO     | job summary report
[2026-04-12 12:29:57] 2026-04-12 16:29:14,130 | INFO     | --------------------------------------------------
[2026-04-12 12:29:57] 2026-04-12 16:29:14,130 | INFO     | PanDA job id: 7082810402
[2026-04-12 12:29:57] 2026-04-12 16:29:14,130 | INFO     | task id: 49263191
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | errors: (none)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | pilot state: finished 
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | transexitcode: 0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | exeerrorcode: 0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | exeerrordiag: 
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | exitcode: 0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | exitmsg: OK
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | cpuconsumptiontime: 39018 s
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | nevents: 400
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | neventsw: 0
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | pid: 618240
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | pgrp: 618240
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | corecount: 8
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | event service: False
[2026-04-12 12:29:57] 2026-04-12 16:29:14,131 | INFO     | sizes: {0: 2279715, 1: 2281544, 12: 2281544, 9439: 2310023, 9441: 2319021, 9444: 2319077, 9447: 2319463}
[2026-04-12 12:29:57] 2026-04-12 16:29:14,132 | INFO     | --------------------------------------------------
[2026-04-12 12:29:57] 2026-04-12 16:29:14,132 | INFO     | 
[2026-04-12 12:29:57] 2026-04-12 16:29:14,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-12 12:29:57] 2026-04-12 16:29:14,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | job 7082810402 has completed (purged errors)
[2026-04-12 12:29:57] 2026-04-12 16:29:14,159 | INFO     | overall cleanup function is called
[2026-04-12 12:29:58] 2026-04-12 16:29:15,170 | INFO     | --- collectZombieJob: --- 10, [618240]
[2026-04-12 12:29:58] 2026-04-12 16:29:15,170 | INFO     | zombie collector waiting for pid 618240
[2026-04-12 12:29:58] 2026-04-12 16:29:15,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 12:29:58] 2026-04-12 16:29:15,170 | INFO     | collected zombie processes
[2026-04-12 12:29:58] 2026-04-12 16:29:15,170 | INFO     | will attempt to kill all subprocesses of pid=618240
[2026-04-12 12:29:58] 2026-04-12 16:29:15,639 | INFO     | process IDs to be killed: [618240] (in reverse order)
[2026-04-12 12:29:58] 2026-04-12 16:29:15,735 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 12:29:58] 2026-04-12 16:29:15,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 12:29:58] 2026-04-12 16:29:15,747 | INFO     | did not find any defunct processes belonging to 618240
[2026-04-12 12:29:58] 2026-04-12 16:29:15,759 | INFO     | did not find any defunct processes belonging to 618240
[2026-04-12 12:29:58] 2026-04-12 16:29:15,759 | INFO     | Ready for new job
[2026-04-12 12:29:58] 2026-04-12 16:29:15,760 | INFO     | **************************************
[2026-04-12 12:29:58] 2026-04-12 16:29:15,761 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 12:29:58] 2026-04-12 16:29:15,761 | INFO     | **************************************
[2026-04-12 12:29:58] 2026-04-12 16:29:15,761 | INFO     | 
[2026-04-12 12:29:58] 2026-04-12 16:29:15,764 | INFO     | architecture information:
[2026-04-12 12:29:58] 2026-04-12 16:29:15,764 | INFO     | executing command: cat /etc/os-release
[2026-04-12 12:29:58] 2026-04-12 16:29:15,778 | INFO     | cat /etc/os-release:
[2026-04-12 12:29:58] NAME="CentOS Linux"
[2026-04-12 12:29:58] VERSION="7 (Core)"
[2026-04-12 12:29:58] ID="centos"
[2026-04-12 12:29:58] ID_LIKE="rhel fedora"
[2026-04-12 12:29:58] VERSION_ID="7"
[2026-04-12 12:29:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 12:29:58] ANSI_COLOR="0;31"
[2026-04-12 12:29:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 12:29:58] HOME_URL="https://www.centos.org/"
[2026-04-12 12:29:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 12:29:58] 
[2026-04-12 12:29:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 12:29:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 12:29:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 12:29:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 12:29:58] 
[2026-04-12 12:29:58] 2026-04-12 16:29:15,779 | INFO     | **************************************
[2026-04-12 12:29:58] 2026-04-12 16:29:16,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-12 12:29:58] 2026-04-12 16:29:16,356 | INFO     | sufficient remaining disk space (75213307904 B)
[2026-04-12 12:29:58] 2026-04-12 16:29:16,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 12:29:58] 2026-04-12 16:29:16,357 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 12:29:58] 2026-04-12 16:29:16,357 | INFO     | update_server=False
[2026-04-12 12:29:58] 2026-04-12 16:29:16,357 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 12:29:58] 2026-04-12 16:29:16,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 12:29:58] 2026-04-12 16:29:16,395 | INFO     | all data control threads have been joined
[2026-04-12 12:29:58] 2026-04-12 16:29:16,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 12:29:58] 2026-04-12 16:29:16,455 | INFO     | aborting loop
[2026-04-12 12:29:58] 2026-04-12 16:29:16,831 | INFO     | all payload control threads have been joined
[2026-04-12 12:29:58] 2026-04-12 16:29:17,262 | INFO     | all job control threads have been joined
[2026-04-12 12:29:58] 2026-04-12 16:29:17,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 12:29:58] 2026-04-12 16:29:17,363 | INFO     | [job] retrieve thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:17,401 | INFO     | [data] control thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:17,461 | INFO     | [job] job monitor thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:17,541 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:17,837 | INFO     | [payload] control thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:17,923 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,247 | INFO     | [payload] failed_post thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,247 | INFO     | [payload] validate_post thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,268 | INFO     | [job] control thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,366 | INFO     | [data] copytool_out thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,449 | INFO     | [job] validate thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,668 | INFO     | [data] copytool_in thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:18,719 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:19,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 12:29:58] 2026-04-12 16:29:20,153 | INFO     | [job] queue monitor thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:21,342 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:26,771 | INFO     | job.realtimelogging is not enabled
[2026-04-12 12:29:58] 2026-04-12 16:29:27,777 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 12:29:58] 2026-04-12 16:29:46,898 | INFO     | PID=611760 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-12 12:29:58] 2026-04-12 16:29:46,898 | INFO     | .. there are 17 such processes running
[2026-04-12 12:29:58] 2026-04-12 16:29:46,898 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 12:29:58] 2026-04-12 16:29:46,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 12:29:58] 2026-04-12 16:29:46,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 12:29:58] 2026-04-12 16:29:50,949 | INFO     | [monitor] cgroup control has ended
[2026-04-12 12:29:58] 2026-04-12 16:29:52,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546532828992)>', '<ExcThread(monitor, started 140545800259328)>']
[2026-04-12 12:29:58] 2026-04-12 16:29:52,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 12:29:58] 2026-04-12 16:29:52,939 | INFO     | [monitor] control thread has ended
[2026-04-12 12:29:58] 2026-04-12 16:29:57,046 | INFO     | all workflow threads have been joined
[2026-04-12 12:29:58] 2026-04-12 16:29:57,046 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 12:29:58] 2026-04-12 16:29:57,046 | INFO     | traces error code: 0
[2026-04-12 12:29:58] 2026-04-12 16:29:57,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 12:29:58] 2026-04-12 16:29:57,223 [wrapper] ==== pilot stdout END ====
[2026-04-12 12:29:58] 2026-04-12 16:29:57,239 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 12:29:58] 2026-04-12 16:29:57,257 [wrapper] pilotpid: 611760
[2026-04-12 12:29:58] 2026-04-12 16:29:57,275 [wrapper] Pilot exit status: 0
[2026-04-12 12:29:58] 2026-04-12 16:29:57,365 [wrapper] pandaids: 7082810402
[2026-04-12 12:29:58] 2026-04-12 16:29:57,523 [wrapper] cleanup supervisor_pilot  948249 611761
[2026-04-12 12:29:58] 2026-04-12 16:29:57,549 [wrapper] Test setup, not cleaning
[2026-04-12 12:29:58] 2026-04-12 16:29:57,567 [wrapper] apfmon messages muted
[2026-04-12 12:29:58] 2026-04-12 16:29:57,590 [wrapper] ==== wrapper stdout END ====
[2026-04-12 12:29:58] 2026-04-12 16:29:57,613 [wrapper] ==== wrapper stderr END ====
[2026-04-12 12:29:58]  *** Error codes and diagnostics ***
[2026-04-12 12:29:58]     "exeErrorCode": 0,
[2026-04-12 12:29:58]     "pilotErrorCode": 0,
[2026-04-12 12:29:58]  *** Listing of results directory ***
[2026-04-12 12:29:58] total 411164
[2026-04-12 12:29:58] -rwx------. 1 boincer umatlas     36322 Apr 12 05:47 runpilot2-wrapper.sh
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas      5094 Apr 12 05:49 queuedata.json
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas    644190 Apr 12 05:49 pilot3.tar.gz
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas       100 Apr 12 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 12:29:58] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 12 09:50 run_atlas
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas       105 Apr 12 09:50 job.xml
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas 222974488 Apr 12 09:50 EVNT.49263189._000369.pool.root.1
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 09:50 start_atlas.sh
[2026-04-12 12:29:58] drwxrwx--x. 2 boincer umatlas      4096 Apr 12 09:50 shared
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas    656931 Apr 12 09:50 input.tar.gz
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas         0 Apr 12 09:50 boinc_lockfile
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas      2575 Apr 12 09:50 pandaJob.out
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas        57 Apr 12 09:50 setup.sh.local
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas    997759 Apr 12 09:51 agis_schedconf.cvmfs.json
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas   1511579 Apr 12 09:51 agis_ddmendpoints.agis.ALL.json
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas       441 Apr 12 09:51 workernode_map.json
[2026-04-12 12:29:58] drwx------. 5 boincer umatlas      4096 Apr 12 09:51 pilot3
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas 191575644 Apr 12 12:28 HITS.49263191._031170.pool.root.1
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas       487 Apr 12 12:28 boinc_task_state.xml
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas        95 Apr 12 12:28 pilot_heartbeat.json
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas      6757 Apr 12 12:28 init_data.xml
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas      1037 Apr 12 12:29 memory_monitor_summary.json
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas    364063 Apr 12 12:29 log.49263191._031170.job.log.tgz.1
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas      6397 Apr 12 12:29 heartbeat_new.json
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas      6288 Apr 12 12:29 heartbeat.json
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 12:29 boinc_mmap_file
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas        27 Apr 12 12:29 wrapper_checkpoint.txt
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas      4890 Apr 12 12:29 pilotlog.txt
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas    847114 Apr 12 12:29 log.49263191._031170.job.log.1
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas       357 Apr 12 12:29 output.list
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas       410 Apr 12 12:29 runtime_log
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas   1228800 Apr 12 12:29 result.tar.gz
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas      8963 Apr 12 12:29 runtime_log.err
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas       652 Apr 12 12:29 6a22dd4f0d19.diag
[2026-04-12 12:29:58] -rw-r--r--. 1 boincer umatlas     20834 Apr 12 12:29 stderr.txt
[2026-04-12 12:29:58] HITS file was successfully produced:
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas 191575644 Apr 12 12:28 shared/HITS.pool.root.1
[2026-04-12 12:29:58]  *** Contents of shared directory: ***
[2026-04-12 12:29:58] total 406704
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas 222974488 Apr 12 09:50 ATLAS.root_0
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 09:50 start_atlas.sh
[2026-04-12 12:29:58] -rw-r--r--. 2 boincer umatlas    656931 Apr 12 09:50 input.tar.gz
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas 191575644 Apr 12 12:28 HITS.pool.root.1
[2026-04-12 12:29:58] -rw-------. 1 boincer umatlas   1228800 Apr 12 12:29 result.tar.gz
12:29:59 (607381): run_atlas exited; CPU time 39172.681952
12:29:59 (607381): called boinc_finish(0)

</stderr_txt>
]]>

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