Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:09:44 (1789867): wrapper (7.7.26015): starting
13:09:44 (1789867): wrapper: running run_atlas (--nthreads 4)
[2026-04-14 13:09:44] Arguments: --nthreads 4
[2026-04-14 13:09:44] Threads: 4
[2026-04-14 13:09:44] Checking for CVMFS
[2026-04-14 13:09:44] No cvmfs_config command found, will try listing directly
[2026-04-14 13:09:44] CVMFS is ok
[2026-04-14 13:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-14 13:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-14 13:09:44] Further information can be found at the LHC@home message board.
[2026-04-14 13:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-14 13:09:44] Checking for apptainer binary...
[2026-04-14 13:09:44] which: no apptainer in ((null))
[2026-04-14 13:09:44] apptainer is not installed, using version from CVMFS
[2026-04-14 13:09:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-14 13:09:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-04-14 13:09:44] apptainer works
[2026-04-14 13:09:44] Set ATHENA_PROC_NUMBER=4
[2026-04-14 13:09:44] Set ATHENA_CORE_NUMBER=4
[2026-04-14 13:09:44] Starting ATLAS job with PandaID=7086954223
[2026-04-14 13:09:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 16:28:27]  *** The last 200 lines of the pilot log: ***
[2026-04-14 16:28:27] 2026-04-14 14:27:47,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-14 16:28:27] 2026-04-14 14:27:47,149 | INFO     | job 7086954223 has state=finished
[2026-04-14 16:28:27] 2026-04-14 14:27:47,149 | INFO     | preparing for final server update for job 7086954223 in state='finished'
[2026-04-14 16:28:27] 2026-04-14 14:27:47,150 | INFO     | reading metadata from: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7086954223/jobReport.json
[2026-04-14 16:28:27] 2026-04-14 14:27:47,151 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot40/slots/0/workernode_map.json
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | INFO     | this job has now completed (state=finished)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | INFO     | log transfer has been attempted: DONE
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | INFO     | job 7086954223 has finished - writing final server update
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_193583/.job.ad'
[2026-04-14 16:28:27] 2026-04-14 14:27:47,152 | INFO     | total number of processed events: 400 (read)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,160 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/PanDA_Pilot-7086954223/memory_monitor_summary.json (trf name=prmon)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,161 | INFO     | extracted standard info from prmon json
[2026-04-14 16:28:27] 2026-04-14 14:27:47,161 | INFO     | extracted standard memory fields from prmon json
[2026-04-14 16:28:27] 2026-04-14 14:27:47,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-14 16:28:27] 2026-04-14 14:27:47,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-14 16:28:27] 2026-04-14 14:27:47,163 | INFO     | fitting pss+swap vs Time
[2026-04-14 16:28:27] 2026-04-14 14:27:47,164 | INFO     | sum of square deviations: 2263977332.5
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | sum of deviations: 20962031398.999996
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | mean x (centered): 0.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | mean y: 2322128.649484536
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | intersect: 2322128.649484536
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | chi2: 1.203301555362062
[2026-04-14 16:28:27] 2026-04-14 14:27:47,165 | INFO     | sum of square deviations: 2093397390.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | sum of deviations: 20139469274.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | mean x (centered): 0.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | mean y: 2321393.111111111
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | intersect: 2321393.111111111
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | chi2: 1.204018532122654
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | current chi2=1.204018532122654 (change=-0.05958412979663868 %)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,166 | INFO     | right removable region: 188
[2026-04-14 16:28:27] 2026-04-14 14:27:47,167 | INFO     | sum of square deviations: 2093397390.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,167 | INFO     | sum of deviations: -70352519.99999979
[2026-04-14 16:28:27] 2026-04-14 14:27:47,167 | INFO     | mean x (centered): 0.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,168 | INFO     | mean y: 2340631.566137566
[2026-04-14 16:28:27] 2026-04-14 14:27:47,168 | INFO     | intersect: 2340631.566137566
[2026-04-14 16:28:27] 2026-04-14 14:27:47,168 | INFO     | chi2: 0.0014790919294929436
[2026-04-14 16:28:27] 2026-04-14 14:27:47,168 | INFO     | current chi2=0.0014790919294929436 (change=99.87708052707968 %)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,168 | INFO     | sum of square deviations: 1931608310.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | sum of deviations: -259513306.4999999
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | mean x (centered): 0.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | mean y: 2340809.1467391304
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | intersect: 2340809.1467391304
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | chi2: 0.0014062228151727294
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | current chi2=0.0014062228151727294 (change=4.926611582905124 %)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | left removable region: 10
[2026-04-14 16:28:27] 2026-04-14 14:27:47,169 | INFO     | sum of square deviations: 1748737904.5
[2026-04-14 16:28:27] 2026-04-14 14:27:47,170 | INFO     | sum of deviations: -566698021.5
[2026-04-14 16:28:27] 2026-04-14 14:27:47,170 | INFO     | mean x (centered): 0.0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,170 | INFO     | mean y: 2340501.6348314607
[2026-04-14 16:28:27] 2026-04-14 14:27:47,170 | INFO     | intersect: 2340501.6348314607
[2026-04-14 16:28:27] 2026-04-14 14:27:47,170 | INFO     | chi2: 0.001285127590215832
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | current memory leak: -0.32 B/s (using 178 data points, chi2=0.00)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | could have reported an average CPU frequency of 2507 MHz (10 samples)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | ..............................
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . Timing measurements:
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . get job = 0 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . initial setup = 6 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . payload setup = 10 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . stage-in = 0 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . payload execution = 11834 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . stage-out = 1 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | . log creation = 0 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,171 | INFO     | ..............................
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | 
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | job summary report
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | --------------------------------------------------
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | PanDA job id: 7086954223
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | task id: 49263208
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | errors: (none)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | pilot state: finished 
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | transexitcode: 0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | exeerrorcode: 0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | exeerrordiag: 
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | exitcode: 0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | exitmsg: OK
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | cpuconsumptiontime: 45823 s
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | nevents: 400
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | neventsw: 0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | pid: 1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | pgrp: 1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | corecount: 4
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | event service: False
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | sizes: {0: 2279678, 1: 2281507, 11: 2281507, 11849: 2310897, 11851: 2319917, 11854: 2320295}
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | --------------------------------------------------
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | 
[2026-04-14 16:28:27] 2026-04-14 14:27:47,229 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,248 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,248 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 16:28:27] 2026-04-14 14:27:47,248 | INFO     | job 7086954223 has completed (purged errors)
[2026-04-14 16:28:27] 2026-04-14 14:27:47,248 | INFO     | overall cleanup function is called
[2026-04-14 16:28:27] 2026-04-14 14:27:48,256 | INFO     | --- collectZombieJob: --- 10, [1799055]
[2026-04-14 16:28:27] 2026-04-14 14:27:48,256 | INFO     | zombie collector waiting for pid 1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:48,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 16:28:27] 2026-04-14 14:27:48,257 | INFO     | collected zombie processes
[2026-04-14 16:28:27] 2026-04-14 14:27:48,257 | INFO     | will attempt to kill all subprocesses of pid=1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:48,665 | INFO     | process IDs to be killed: [1799055] (in reverse order)
[2026-04-14 16:28:27] 2026-04-14 14:27:48,794 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 16:28:27] 2026-04-14 14:27:48,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 16:28:27] 2026-04-14 14:27:48,807 | INFO     | did not find any defunct processes belonging to 1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:48,820 | INFO     | did not find any defunct processes belonging to 1799055
[2026-04-14 16:28:27] 2026-04-14 14:27:48,820 | INFO     | Ready for new job
[2026-04-14 16:28:27] 2026-04-14 14:27:48,822 | INFO     | **************************************
[2026-04-14 16:28:27] 2026-04-14 14:27:48,822 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 16:28:27] 2026-04-14 14:27:48,823 | INFO     | **************************************
[2026-04-14 16:28:27] 2026-04-14 14:27:48,823 | INFO     | 
[2026-04-14 16:28:27] 2026-04-14 14:27:48,827 | INFO     | architecture information:
[2026-04-14 16:28:27] 2026-04-14 14:27:48,827 | INFO     | executing command: cat /etc/os-release
[2026-04-14 16:28:27] 2026-04-14 14:27:48,843 | INFO     | cat /etc/os-release:
[2026-04-14 16:28:27] NAME="CentOS Linux"
[2026-04-14 16:28:27] VERSION="7 (Core)"
[2026-04-14 16:28:27] ID="centos"
[2026-04-14 16:28:27] ID_LIKE="rhel fedora"
[2026-04-14 16:28:27] VERSION_ID="7"
[2026-04-14 16:28:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 16:28:27] ANSI_COLOR="0;31"
[2026-04-14 16:28:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 16:28:27] HOME_URL="https://www.centos.org/"
[2026-04-14 16:28:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 16:28:27] 
[2026-04-14 16:28:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 16:28:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 16:28:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 16:28:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 16:28:27] 
[2026-04-14 16:28:27] 2026-04-14 14:27:48,844 | INFO     | **************************************
[2026-04-14 16:28:27] 2026-04-14 14:27:49,347 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-04-14 16:28:27] 2026-04-14 14:27:49,364 | INFO     | sufficient remaining disk space (38801506304 B)
[2026-04-14 16:28:27] 2026-04-14 14:27:49,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 16:28:27] 2026-04-14 14:27:49,365 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 16:28:27] 2026-04-14 14:27:49,365 | INFO     | update_server=False
[2026-04-14 16:28:27] 2026-04-14 14:27:49,365 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 16:28:27] 2026-04-14 14:27:49,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 16:28:27] 2026-04-14 14:27:49,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 16:28:27] 2026-04-14 14:27:49,704 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-14 16:28:27] 2026-04-14 14:27:49,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-14 16:28:27] 2026-04-14 14:27:49,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 16:28:27] 2026-04-14 14:27:49,704 | INFO     | will abort loop
[2026-04-14 16:28:27] 2026-04-14 14:27:49,817 | INFO     | all payload control threads have been joined
[2026-04-14 16:28:27] 2026-04-14 14:27:49,860 | INFO     | all data control threads have been joined
[2026-04-14 16:28:27] 2026-04-14 14:27:49,971 | INFO     | all job control threads have been joined
[2026-04-14 16:28:27] 2026-04-14 14:27:50,367 | INFO     | [job] retrieve thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,668 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,710 | INFO     | [job] job monitor thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,792 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,823 | INFO     | [payload] control thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,865 | INFO     | [data] control thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:50,976 | INFO     | [job] control thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,047 | INFO     | [payload] failed_post thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,082 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,083 | INFO     | [data] copytool_in thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,239 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,371 | INFO     | [data] copytool_out thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,585 | INFO     | [payload] validate_post thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:51,822 | INFO     | [job] validate thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:52,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 16:28:27] 2026-04-14 14:27:53,244 | INFO     | [job] queue monitor thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:27:53,373 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 16:28:27] 2026-04-14 14:28:19,685 | INFO     | PID=1793983 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 16:28:27] 2026-04-14 14:28:19,685 | INFO     | .. there are 11 such processes running
[2026-04-14 16:28:27] 2026-04-14 14:28:19,685 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 16:28:27] 2026-04-14 14:28:19,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 16:28:27] 2026-04-14 14:28:19,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 16:28:27] 2026-04-14 14:28:21,070 | INFO     | [monitor] cgroup control has ended
[2026-04-14 16:28:27] 2026-04-14 14:28:22,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23044058974016)>', '<ExcThread(monitor, started 23043819972352)>']
[2026-04-14 16:28:27] 2026-04-14 14:28:22,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 16:28:27] 2026-04-14 14:28:22,701 | INFO     | [monitor] control thread has ended
[2026-04-14 16:28:27] 2026-04-14 14:28:27,457 | INFO     | all workflow threads have been joined
[2026-04-14 16:28:27] 2026-04-14 14:28:27,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 16:28:27] 2026-04-14 14:28:27,457 | INFO     | traces error code: 0
[2026-04-14 16:28:27] 2026-04-14 14:28:27,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 16:28:27] 2026-04-14 14:28:27,595 [wrapper] ==== pilot stdout END ====
[2026-04-14 16:28:27] 2026-04-14 14:28:27,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 16:28:27] 2026-04-14 14:28:27,600 [wrapper] pilotpid: 1793983
[2026-04-14 16:28:27] 2026-04-14 14:28:27,603 [wrapper] Pilot exit status: 0
[2026-04-14 16:28:27] 2026-04-14 14:28:27,614 [wrapper] pandaids: 7086954223
[2026-04-14 16:28:27] 2026-04-14 14:28:27,689 [wrapper] cleanup supervisor_pilot 2020242 1793984
[2026-04-14 16:28:27] 2026-04-14 14:28:27,693 [wrapper] Test setup, not cleaning
[2026-04-14 16:28:27] 2026-04-14 14:28:27,696 [wrapper] apfmon messages muted
[2026-04-14 16:28:27] 2026-04-14 14:28:27,699 [wrapper] ==== wrapper stdout END ====
[2026-04-14 16:28:27] 2026-04-14 14:28:27,702 [wrapper] ==== wrapper stderr END ====
[2026-04-14 16:28:27]  *** Error codes and diagnostics ***
[2026-04-14 16:28:27]     "exeErrorCode": 0,
[2026-04-14 16:28:27]     "pilotErrorCode": 0,
[2026-04-14 16:28:27]  *** Listing of results directory ***
[2026-04-14 16:28:27] total 425304
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc    644190 Apr 11 07:38 pilot3.tar.gz
[2026-04-14 16:28:27] -rwx------. 1 boinc boinc     36322 Apr 11 07:38 runpilot2-wrapper.sh
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc      5094 Apr 11 07:40 queuedata.json
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc       100 Apr 14 13:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 16:28:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 14 13:09 run_atlas
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc       105 Apr 14 13:09 job.xml
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc 223848419 Apr 14 13:09 EVNT.49263206._000852.pool.root.1
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc      6481 Apr 14 13:09 init_data.xml
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 13:09 start_atlas.sh
[2026-04-14 16:28:27] drwxrwx--x. 2 boinc boinc      4096 Apr 14 13:09 shared
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc    656928 Apr 14 13:09 input.tar.gz
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc         0 Apr 14 13:09 boinc_lockfile
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc      2575 Apr 14 13:09 pandaJob.out
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc    997519 Apr 14 13:09 agis_schedconf.cvmfs.json
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc       452 Apr 14 13:10 workernode_map.json
[2026-04-14 16:28:27] drwx------. 5 boinc boinc      4096 Apr 14 13:10 pilot3
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc 204747355 Apr 14 16:27 HITS.49263208._034919.pool.root.1
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc       487 Apr 14 16:27 boinc_task_state.xml
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc        95 Apr 14 16:27 pilot_heartbeat.json
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc      1035 Apr 14 16:27 memory_monitor_summary.json
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc   1511579 Apr 14 16:27 agis_ddmendpoints.agis.ALL.json
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc    315132 Apr 14 16:27 log.49263208._034919.job.log.tgz.1
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc      6431 Apr 14 16:27 heartbeat_new.json
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc      6322 Apr 14 16:27 heartbeat.json
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc      8192 Apr 14 16:28 boinc_mmap_file
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc        27 Apr 14 16:28 wrapper_checkpoint.txt
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc      5014 Apr 14 16:28 pilotlog.txt
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc   1113329 Apr 14 16:28 log.49263208._034919.job.log.1
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc       357 Apr 14 16:28 output.list
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc       410 Apr 14 16:28 runtime_log
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc   1443840 Apr 14 16:28 result.tar.gz
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc      8827 Apr 14 16:28 runtime_log.err
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc       665 Apr 14 16:28 de6e9fa55126.diag
[2026-04-14 16:28:27] -rw-r--r--. 1 boinc boinc     21060 Apr 14 16:28 stderr.txt
[2026-04-14 16:28:27] HITS file was successfully produced:
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc 204747355 Apr 14 16:27 shared/HITS.pool.root.1
[2026-04-14 16:28:27]  *** Contents of shared directory: ***
[2026-04-14 16:28:27] total 420636
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc 223848419 Apr 14 13:09 ATLAS.root_0
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc     15665 Apr 14 13:09 start_atlas.sh
[2026-04-14 16:28:27] -rw-r--r--. 2 boinc boinc    656928 Apr 14 13:09 input.tar.gz
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc 204747355 Apr 14 16:27 HITS.pool.root.1
[2026-04-14 16:28:27] -rw-------. 1 boinc boinc   1443840 Apr 14 16:28 result.tar.gz
16:28:28 (1789867): run_atlas exited; CPU time 46305.944563
16:28:28 (1789867): called boinc_finish(0)

</stderr_txt>
]]>

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