Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:03 (4040849): wrapper (7.7.26015): starting
05:47:03 (4040849): wrapper: running run_atlas (--nthreads 9)
[2026-04-12 05:47:03] Arguments: --nthreads 9
[2026-04-12 05:47:03] Threads: 9
[2026-04-12 05:47:03] Checking for CVMFS
[2026-04-12 05:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 05:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 05:47:05] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 05:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 05:47:06] 2.13.3.0 11160 227169 658876 158374 0 196 23157558 32935937 20253 16776704 0 722051150 99.570 962455175 39123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-12 05:47:06] CVMFS is ok
[2026-04-12 05:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 05:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 05:47:06] Further information can be found at the LHC@home message board.
[2026-04-12 05:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 05:47:06] Checking for apptainer binary...
[2026-04-12 05:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 05:47:06] Running /usr/bin/apptainer --version
[2026-04-12 05:47:06] apptainer version 1.4.5-2.el9
[2026-04-12 05:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 05:47:06] c6-2-29-2.aglt2.org
[2026-04-12 05:47:06] apptainer works
[2026-04-12 05:47:06] Set ATHENA_PROC_NUMBER=9
[2026-04-12 05:47:06] Set ATHENA_CORE_NUMBER=9
[2026-04-12 05:47:06] Starting ATLAS job with PandaID=7087897590
[2026-04-12 05:47:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 07:47:16]  *** The last 200 lines of the pilot log: ***
[2026-04-12 07:47:16] 2026-04-12 11:46:40,637 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,637 | INFO     | mean y: 2533045.7155172415
[2026-04-12 07:47:16] 2026-04-12 11:46:40,637 | INFO     | intersect: 2533045.7155172415
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | chi2: 1.7003351976124397
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | sum of square deviations: 424067536.558558
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | sum of deviations: 12465319141.639631
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | mean y: 2531891.099099099
[2026-04-12 07:47:16] 2026-04-12 11:46:40,638 | INFO     | intersect: 2531891.099099099
[2026-04-12 07:47:16] 2026-04-12 11:46:40,643 | INFO     | chi2: 1.7039389111701604
[2026-04-12 07:47:16] 2026-04-12 11:46:40,656 | INFO     | current chi2=1.7039389111701604 (change=-0.21194136090230556 %)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,656 | INFO     | right removable region: 110
[2026-04-12 07:47:16] 2026-04-12 11:46:40,656 | INFO     | sum of square deviations: 424053386.9369373
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | sum of deviations: -6691284438.882883
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | mean y: 2582055.8018018017
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | intersect: 2582055.8018018017
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | chi2: 0.05036177596358974
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | current chi2=0.05036177596358974 (change=97.03812659796102 %)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,657 | INFO     | sum of square deviations: 369282309.39622617
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | sum of deviations: -6284048983.283015
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | mean y: 2580796.8396226414
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | intersect: 2580796.8396226414
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | chi2: 0.03705487306386198
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | current chi2=0.03705487306386198 (change=26.42262439145972 %)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,658 | INFO     | sum of square deviations: 319435090.9504941
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | sum of deviations: -4018966889.9108934
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | mean y: 2573851.198019802
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | intersect: 2573851.198019802
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | chi2: 0.03044665195352528
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | current chi2=0.03044665195352528 (change=17.83360881832682 %)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | left removable region: 15
[2026-04-12 07:47:16] 2026-04-12 11:46:40,659 | INFO     | sum of square deviations: 265819747.53684223
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | sum of deviations: -3738621877.578946
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | mean x (centered): 0.0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | mean y: 2574809.3157894737
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | intersect: 2574809.3157894737
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | chi2: 0.029887844472172943
[2026-04-12 07:47:16] 2026-04-12 11:46:40,664 | INFO     | current memory leak: -14.06 B/s (using 95 data points, chi2=0.03)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | could have reported an average CPU frequency of 2902 MHz (7 samples)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | ..............................
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . Timing measurements:
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . get job = 0 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . initial setup = 16 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . payload setup = 40 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . stage-in = 0 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . payload execution = 7080 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . stage-out = 1 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | . log creation = 0 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,665 | INFO     | ..............................
[2026-04-12 07:47:16] 2026-04-12 11:46:40,878 | INFO     | 
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | job summary report
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | --------------------------------------------------
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | PanDA job id: 7087897590
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | task id: 49263200
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | errors: (none)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | pilot state: finished 
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | transexitcode: 0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | exeerrorcode: 0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | exeerrordiag: 
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | exitcode: 0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,879 | INFO     | exitmsg: OK
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | cpuconsumptiontime: 38167 s
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | nevents: 400
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | neventsw: 0
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | pid: 4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | pgrp: 4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | corecount: 9
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | event service: False
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | sizes: {0: 2281520, 1: 2281520, 7124: 2308957, 7125: 2308956, 7127: 2318010, 7129: 2318066, 7130: 2318388}
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | --------------------------------------------------
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | 
[2026-04-12 07:47:16] 2026-04-12 11:46:40,880 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-12 07:47:16] 2026-04-12 11:46:40,946 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,946 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | job 7087897590 has completed (purged errors)
[2026-04-12 07:47:16] 2026-04-12 11:46:40,948 | INFO     | overall cleanup function is called
[2026-04-12 07:47:16] 2026-04-12 11:46:41,236 | WARNING  | process 4051514 can no longer be monitored (due to stat problems) - aborting
[2026-04-12 07:47:16] 2026-04-12 11:46:41,667 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 07:47:16] 2026-04-12 11:46:41,667 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 07:47:16] 2026-04-12 11:46:41,668 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-12 07:47:16] 2026-04-12 11:46:41,668 | WARNING  | maxPSS not found in memory monitor output
[2026-04-12 07:47:16] 2026-04-12 11:46:41,668 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7087897590/payload.stdout) since it has not been created yet
[2026-04-12 07:47:16] 2026-04-12 11:46:41,668 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-12 07:47:16] 2026-04-12 11:46:41,685 | INFO     | sufficient remaining disk space (75161927680 B)
[2026-04-12 07:47:16] 2026-04-12 11:46:41,686 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-12 07:47:16] 2026-04-12 11:46:41,686 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7087897590/HITS.49263200._050899.pool.root.1 since it does not exist
[2026-04-12 07:47:16] 2026-04-12 11:46:41,969 | INFO     | --- collectZombieJob: --- 10, [4051514]
[2026-04-12 07:47:16] 2026-04-12 11:46:41,969 | INFO     | zombie collector waiting for pid 4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:41,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 07:47:16] 2026-04-12 11:46:41,969 | INFO     | collected zombie processes
[2026-04-12 07:47:16] 2026-04-12 11:46:41,969 | INFO     | will attempt to kill all subprocesses of pid=4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:42,737 | INFO     | number of running child processes to parent process 4051514: 1
[2026-04-12 07:47:16] 2026-04-12 11:46:42,737 | INFO     | maximum number of monitored processes: 6
[2026-04-12 07:47:16] 2026-04-12 11:46:42,737 | INFO     | aborting job monitoring since job object (job id=7087897590) has expired
[2026-04-12 07:47:16] 2026-04-12 11:46:42,849 | INFO     | process IDs to be killed: [4051514] (in reverse order)
[2026-04-12 07:47:16] 2026-04-12 11:46:42,962 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 07:47:16] 2026-04-12 11:46:42,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 07:47:16] 2026-04-12 11:46:42,985 | INFO     | did not find any defunct processes belonging to 4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:42,999 | INFO     | did not find any defunct processes belonging to 4051514
[2026-04-12 07:47:16] 2026-04-12 11:46:43,000 | INFO     | Ready for new job
[2026-04-12 07:47:16] 2026-04-12 11:46:43,001 | INFO     | **************************************
[2026-04-12 07:47:16] 2026-04-12 11:46:43,004 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 07:47:16] 2026-04-12 11:46:43,004 | INFO     | **************************************
[2026-04-12 07:47:16] 2026-04-12 11:46:43,004 | INFO     | 
[2026-04-12 07:47:16] 2026-04-12 11:46:43,008 | INFO     | architecture information:
[2026-04-12 07:47:16] 2026-04-12 11:46:43,008 | INFO     | executing command: cat /etc/os-release
[2026-04-12 07:47:16] 2026-04-12 11:46:43,044 | INFO     | cat /etc/os-release:
[2026-04-12 07:47:16] NAME="CentOS Linux"
[2026-04-12 07:47:16] VERSION="7 (Core)"
[2026-04-12 07:47:16] ID="centos"
[2026-04-12 07:47:16] ID_LIKE="rhel fedora"
[2026-04-12 07:47:16] VERSION_ID="7"
[2026-04-12 07:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 07:47:16] ANSI_COLOR="0;31"
[2026-04-12 07:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 07:47:16] HOME_URL="https://www.centos.org/"
[2026-04-12 07:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 07:47:16] 
[2026-04-12 07:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 07:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 07:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 07:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 07:47:16] 
[2026-04-12 07:47:16] 2026-04-12 11:46:43,044 | INFO     | **************************************
[2026-04-12 07:47:16] 2026-04-12 11:46:43,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-12 07:47:16] 2026-04-12 11:46:43,584 | INFO     | sufficient remaining disk space (75161927680 B)
[2026-04-12 07:47:16] 2026-04-12 11:46:43,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 07:47:16] 2026-04-12 11:46:43,585 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 07:47:16] 2026-04-12 11:46:43,585 | INFO     | update_server=False
[2026-04-12 07:47:16] 2026-04-12 11:46:43,585 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 07:47:16] 2026-04-12 11:46:43,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 07:47:16] 2026-04-12 11:46:43,586 | INFO     | will abort loop
[2026-04-12 07:47:16] 2026-04-12 11:46:43,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 07:47:16] 2026-04-12 11:46:44,517 | INFO     | all data control threads have been joined
[2026-04-12 07:47:16] 2026-04-12 11:46:44,571 | INFO     | all payload control threads have been joined
[2026-04-12 07:47:16] 2026-04-12 11:46:44,591 | INFO     | [job] retrieve thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:44,594 | INFO     | [job] job monitor thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:44,987 | INFO     | all job control threads have been joined
[2026-04-12 07:47:16] 2026-04-12 11:46:45,101 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,314 | INFO     | [data] copytool_in thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,328 | INFO     | [payload] failed_post thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,391 | INFO     | [payload] validate_post thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,394 | INFO     | [job] validate thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,523 | INFO     | [data] control thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,576 | INFO     | [payload] control thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,706 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,764 | INFO     | [data] copytool_out thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,765 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:45,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 07:47:16] 2026-04-12 11:46:45,994 | INFO     | [job] control thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:46,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 07:47:16] 2026-04-12 11:46:46,907 | INFO     | [job] queue monitor thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:50,653 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:46:53,936 | INFO     | job.realtimelogging is not enabled
[2026-04-12 07:47:16] 2026-04-12 11:46:54,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 07:47:16] 2026-04-12 11:47:01,265 | INFO     | [monitor] cgroup control has ended
[2026-04-12 07:47:16] 2026-04-12 11:47:02,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593533048640)>', '<ExcThread(monitor, started 140593036506880)>']
[2026-04-12 07:47:16] 2026-04-12 11:47:07,323 | INFO     | all workflow threads have been joined
[2026-04-12 07:47:16] 2026-04-12 11:47:07,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 07:47:16] 2026-04-12 11:47:07,323 | INFO     | traces error code: 0
[2026-04-12 07:47:16] 2026-04-12 11:47:07,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 07:47:16] 2026-04-12 11:47:15,025 | INFO     | PID=4046284 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | INFO     | .. there are 24 such processes running
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 07:47:16] 2026-04-12 11:47:15,026 | INFO     | [monitor] control thread has ended
[2026-04-12 07:47:16] 2026-04-12 11:47:15,287 [wrapper] ==== pilot stdout END ====
[2026-04-12 07:47:16] 2026-04-12 11:47:15,289 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 07:47:16] 2026-04-12 11:47:15,291 [wrapper] pilotpid: 4046284
[2026-04-12 07:47:16] 2026-04-12 11:47:15,293 [wrapper] Pilot exit status: 0
[2026-04-12 07:47:16] 2026-04-12 11:47:15,406 [wrapper] pandaids: 7087897590
[2026-04-12 07:47:16] 2026-04-12 11:47:15,490 [wrapper] cleanup supervisor_pilot   88746 4046285
[2026-04-12 07:47:16] 2026-04-12 11:47:15,545 [wrapper] Test setup, not cleaning
[2026-04-12 07:47:16] 2026-04-12 11:47:15,552 [wrapper] apfmon messages muted
[2026-04-12 07:47:16] 2026-04-12 11:47:15,591 [wrapper] ==== wrapper stdout END ====
[2026-04-12 07:47:16] 2026-04-12 11:47:15,611 [wrapper] ==== wrapper stderr END ====
[2026-04-12 07:47:16]  *** Error codes and diagnostics ***
[2026-04-12 07:47:16]     "exeErrorCode": 0,
[2026-04-12 07:47:16]     "pilotErrorCode": 0,
[2026-04-12 07:47:16]  *** Listing of results directory ***
[2026-04-12 07:47:16] total 410780
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas    644190 Apr 12 02:46 pilot3.tar.gz
[2026-04-12 07:47:16] -rwx------. 1 boincer umatlas     36322 Apr 12 02:47 runpilot2-wrapper.sh
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas      5094 Apr 12 02:49 queuedata.json
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas       100 Apr 12 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 07:47:16] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 12 05:47 run_atlas
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas       105 Apr 12 05:47 job.xml
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas 221999488 Apr 12 05:47 EVNT.49263198._001317.pool.root.1
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 05:47 start_atlas.sh
[2026-04-12 07:47:16] drwxrwx--x. 2 boincer umatlas      4096 Apr 12 05:47 shared
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas    656926 Apr 12 05:47 input.tar.gz
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas         0 Apr 12 05:47 boinc_lockfile
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas      2576 Apr 12 05:47 pandaJob.out
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas        57 Apr 12 05:47 setup.sh.local
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas    997759 Apr 12 05:47 agis_schedconf.cvmfs.json
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas   1511579 Apr 12 05:47 agis_ddmendpoints.agis.ALL.json
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas       442 Apr 12 05:47 workernode_map.json
[2026-04-12 07:47:16] drwx------. 5 boincer umatlas      4096 Apr 12 05:47 pilot3
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas      6758 Apr 12 07:37 init_data.xml
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas 192568770 Apr 12 07:45 HITS.49263200._050899.pool.root.1
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas       488 Apr 12 07:45 boinc_task_state.xml
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas        95 Apr 12 07:46 pilot_heartbeat.json
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas      1039 Apr 12 07:46 memory_monitor_summary.json
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas    349563 Apr 12 07:46 log.49263200._050899.job.log.tgz.1
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas      6407 Apr 12 07:46 heartbeat_new.json
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas      6298 Apr 12 07:46 heartbeat.json
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 07:47 boinc_mmap_file
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas        27 Apr 12 07:47 wrapper_checkpoint.txt
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas       823 Apr 12 07:47 pilotlog.txt
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas    657203 Apr 12 07:47 log.49263200._050899.job.log.1
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas       357 Apr 12 07:47 output.list
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas       410 Apr 12 07:47 runtime_log
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas   1024000 Apr 12 07:47 result.tar.gz
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas      8968 Apr 12 07:47 runtime_log.err
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas       653 Apr 12 07:47 40011f65e10b.diag
[2026-04-12 07:47:16] -rw-r--r--. 1 boincer umatlas     21377 Apr 12 07:47 stderr.txt
[2026-04-12 07:47:16] HITS file was successfully produced:
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas 192568770 Apr 12 07:45 shared/HITS.pool.root.1
[2026-04-12 07:47:16]  *** Contents of shared directory: ***
[2026-04-12 07:47:16] total 406520
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas 221999488 Apr 12 05:47 ATLAS.root_0
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 05:47 start_atlas.sh
[2026-04-12 07:47:16] -rw-r--r--. 2 boincer umatlas    656926 Apr 12 05:47 input.tar.gz
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas 192568770 Apr 12 07:45 HITS.pool.root.1
[2026-04-12 07:47:16] -rw-------. 1 boincer umatlas   1024000 Apr 12 07:47 result.tar.gz
07:47:17 (4040849): run_atlas exited; CPU time 38337.625702
07:47:17 (4040849): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN