Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-13 08:46:13 (15840): vboxwrapper version 26210
2026-04-13 08:46:13 (15840): BOINC client version: 8.2.9
2026-04-13 08:46:13 (15840): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-04-13 08:46:13 (15840): Successfully copied 'init_data.xml' to the shared directory.
2026-04-13 08:46:14 (15840): Create VM. (boinc_0418d169fd0f50db, slot#0)
2026-04-13 08:46:14 (15840): Setting Memory Size for VM. (6600MB)
2026-04-13 08:46:14 (15840): Setting CPU Count for VM. (4)
2026-04-13 08:46:15 (15840): Setting Chipset Options for VM.
2026-04-13 08:46:15 (15840): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-13 08:46:15 (15840): Setting Boot Options for VM.
2026-04-13 08:46:16 (15840): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-13 08:46:16 (15840): Enabling VM Network Access.
2026-04-13 08:46:16 (15840): Disabling USB Support for VM.
2026-04-13 08:46:16 (15840): Disabling COM Port Support for VM.
2026-04-13 08:46:17 (15840): Disabling LPT Port Support for VM.
2026-04-13 08:46:17 (15840): Disabling Audio Support for VM.
2026-04-13 08:46:17 (15840): Disabling Clipboard Support for VM.
2026-04-13 08:46:17 (15840): Disabling Drag and Drop Support for VM.
2026-04-13 08:46:18 (15840): Adding storage controller(s) to VM.
2026-04-13 08:46:18 (15840): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-13 08:46:19 (15840): Adding VirtualBox Guest Additions to VM.
2026-04-13 08:46:19 (15840): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-13 08:46:19 (15840): forwarding host port 63503 to guest port 80
2026-04-13 08:46:19 (15840): Enabling remote desktop for VM.
2026-04-13 08:46:20 (15840): Enabling shared directory for VM.
2026-04-13 08:46:21 (15840): Starting VM using VBoxManage interface. (boinc_0418d169fd0f50db, slot#0)
2026-04-13 08:46:27 (15840): Successfully started VM. (PID = '27060')
2026-04-13 08:46:27 (15840): Reporting VM Process ID to BOINC.
2026-04-13 08:46:27 (15840): Guest Log: BIOS: VirtualBox 7.1.12
2026-04-13 08:46:27 (15840): Guest Log: CPUID EDX: 0x178bfbff
2026-04-13 08:46:27 (15840): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-13 08:46:27 (15840): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-13 08:46:27 (15840): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-13 08:46:27 (15840): Detected: Web Application Enabled (http://localhost:63503)
2026-04-13 08:46:27 (15840): Detected: Remote Desktop Enabled (localhost:63505)
2026-04-13 08:46:27 (15840): Preference change detected
2026-04-13 08:46:27 (15840): Setting CPU throttle for VM. (100%)
2026-04-13 08:46:27 (15840): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-13 08:46:29 (15840): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-13 08:46:29 (15840): Guest Log: BIOS: Booting from Hard Disk...
2026-04-13 08:46:32 (15840): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-13 08:46:32 (15840): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-13 08:46:32 (15840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-13 08:46:38 (15840): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-13 08:46:38 (15840): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-13 08:46:44 (15840): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000195 main     Log opened 2026-04-13T08:46:42.669010000Z
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000325 main     OS Product: Linux
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000357 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000383 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000409 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000410 main     Process ID: 1380
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.000411 main     Package type: LINUX_64BITS_GENERIC
2026-04-13 08:46:44 (15840): Guest Log: 00:00:00.001752 main     5.2.32 r132073 started. Verbose level = 0
2026-04-13 08:46:44 (15840): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-13 08:46:44 (15840): Guest Log: [INFO] Mounting shared directory
2026-04-13 08:46:44 (15840): Guest Log: [INFO] Checking for init_data.xml
2026-04-13 08:46:48 (15840): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-13 08:46:48 (15840): Guest Log: [INFO] Detected branch: prod
2026-04-13 08:46:48 (15840): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-13 08:46:48 (15840): Guest Log: Copying input files
2026-04-13 08:46:49 (15840): Guest Log: Copied input files into RunAtlas.
2026-04-13 08:46:49 (15840): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2026-04-13 08:46:54 (15840): Guest Log: 00:00:10.003948 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 923 651 000ns (GuestNow=1 776 066 413 748 533 000 ns GuestLast=1 776 070 002 672 184 000 ns fSetTimeLastLoop=true )
2026-04-13 08:46:59 (15840): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-13 08:46:59 (15840): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-13 08:46:59 (15840): Guest Log: 2.6.3.0 1657 0 29580 158408 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2026-04-13 08:47:00 (15840): Guest Log: copied the webapp to /var/www
2026-04-13 08:47:00 (15840): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-13 08:47:00 (15840): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-13 08:47:00 (15840): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-13 08:47:00 (15840): Guest Log:  *** Starting ATLAS job. (PandaID=7087765651 taskID=49645815) ***
2026-04-13 10:26:32 (15840): Status Report: Elapsed Time: '6000.000000'
2026-04-13 10:26:32 (15840): Status Report: CPU Time: '22060.359375'
2026-04-13 12:06:37 (15840): Status Report: Elapsed Time: '12000.000000'
2026-04-13 12:06:37 (15840): Status Report: CPU Time: '45727.953125'
2026-04-13 13:12:00 (15840): Guest Log:  *** Job finished ***
2026-04-13 13:12:00 (15840): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:35,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:35,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:51,855 | INFO     | [monitor] cgroup control has ended
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:54,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638621185856)>', '<ExcThread(monitor, started 140637940729600)>']
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:54,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:54,275 | INFO     | [monitor] control thread has ended
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,149 | INFO     | all workflow threads have been joined
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,149 | INFO     | end of generic workflow (traces error code: 0)
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,149 | INFO     | traces error code: 0
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,255 [wrapper] ==== pilot stdout END ====
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,261 [wrapper] ==== wrapper stdout RESUME ====
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,266 [wrapper] pilotpid: 6061
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,271 [wrapper] Pilot exit status: 0
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,300 [wrapper] pandaids: 7087765651
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,330 [wrapper] cleanup supervisor_pilot 28692 6062
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,342 [wrapper] Test setup, not cleaning
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,348 [wrapper] apfmon messages muted
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,353 [wrapper] ==== wrapper stdout END ====
2026-04-13 13:12:00 (15840): Guest Log: 2026-04-13 12:11:59,359 [wrapper] ==== wrapper stderr END ====
2026-04-13 13:12:00 (15840): Guest Log:  *** Error codes and diagnostics ***
2026-04-13 13:12:00 (15840): Guest Log:     "exeErrorCode": 0,
2026-04-13 13:12:00 (15840): Guest Log:     "pilotErrorCode": 0,
2026-04-13 13:12:00 (15840): Guest Log:  *** Listing of results directory ***
2026-04-13 13:12:00 (15840): Guest Log: total 200628
2026-04-13 13:12:00 (15840): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 12 04:40 pilot3.tar.gz
2026-04-13 13:12:00 (15840): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 12 04:43 runpilot2-wrapper.sh
2026-04-13 13:12:00 (15840): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 12 04:44 queuedata.json
2026-04-13 13:12:00 (15840): Guest Log: -rwxr-xr-x. 1 atlas atlas      9216 Apr 13 07:46 init_data.xml
2026-04-13 13:12:00 (15840): Guest Log: -rwxr-xr-x. 1 atlas atlas    656947 Apr 13 07:46 input.tar.gz
2026-04-13 13:12:00 (15840): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 13 07:46 start_atlas.sh
2026-04-13 13:12:00 (15840): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 07:46 EVNT.48629115._000216.pool.root.1 -> /data/./ATLAS.root_0
2026-04-13 13:12:00 (15840): Guest Log: -rw-r--r--. 1 atlas atlas      2627 Apr 13 07:47 pandaJob.out
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas        50 Apr 13 07:47 setup.sh.local
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas    997783 Apr 13 07:47 agis_schedconf.cvmfs.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas       411 Apr 13 07:47 workernode_map.json
2026-04-13 13:12:00 (15840): Guest Log: drwx------. 5 atlas atlas      4096 Apr 13 07:47 pilot3
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas 197879051 Apr 13 12:10 HITS.49645815._005392.pool.root.1
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 13 12:10 memory_monitor_summary.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 13 12:11 agis_ddmendpoints.agis.ALL.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas    349424 Apr 13 12:11 log.49645815._005392.job.log.tgz.1
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas      6340 Apr 13 12:11 heartbeat_new.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas      6231 Apr 13 12:11 heartbeat.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 12:11 pilot_heartbeat.json
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas      4872 Apr 13 12:11 pilotlog.txt
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas   1434994 Apr 13 12:11 log.49645815._005392.job.log.1
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 12:11 output.list
2026-04-13 13:12:00 (15840): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 13 12:11 runtime_log
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas   1802240 Apr 13 12:11 result.tar.gz
2026-04-13 13:12:00 (15840): Guest Log: -rw-r--r--. 1 atlas atlas      8838 Apr 13 12:11 runtime_log.err
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas       654 Apr 13 12:11 22d5c26a79ff.diag
2026-04-13 13:12:00 (15840): Guest Log: Looking for outputfile HITS.49645815._005392.pool.root.1
2026-04-13 13:12:00 (15840): Guest Log: HITS file was successfully produced
2026-04-13 13:12:00 (15840): Guest Log: -rw-------. 1 atlas atlas 197879051 Apr 13 12:10 /home/atlas/RunAtlas/HITS.49645815._005392.pool.root.1
2026-04-13 13:12:01 (15840): Guest Log: Successfully finished the ATLAS job!
2026-04-13 13:12:01 (15840): Guest Log: Copying the results back to the shared directory!
2026-04-13 13:12:01 (15840): Guest Log:  *** Contents of shared directory: ***
2026-04-13 13:12:01 (15840): Guest Log: total 411816
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root 221324772 Apr 13 07:46 ATLAS.root_0
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root 197879051 Apr 13 12:12 HITS.pool.root.1
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root      9216 Apr 13 07:46 init_data.xml
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root    656947 Apr 12 08:16 input.tar.gz
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root   1802240 Apr 13 12:12 result.tar.gz
2026-04-13 13:12:01 (15840): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 12 08:16 start_atlas.sh
2026-04-13 13:12:01 (15840): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-13 13:12:01 (15840): VM Completion File Detected.
2026-04-13 13:12:01 (15840): Powering off VM.
2026-04-13 13:12:02 (15840): Successfully stopped VM.
2026-04-13 13:12:02 (15840): Deregistering VM. (boinc_0418d169fd0f50db, slot#0)
2026-04-13 13:12:02 (15840): Removing network bandwidth throttle group from VM.
2026-04-13 13:12:02 (15840): Removing VM from VirtualBox.
2026-04-13 13:12:07 (15840): called boinc_finish(0)

</stderr_txt>
]]>

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