Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:44:16 (25441): wrapper (7.7.26015): starting
13:44:16 (25441): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 13:44:16] Arguments: --nthreads 8
[2026-04-12 13:44:16] Threads: 8
[2026-04-12 13:44:16] Checking for CVMFS
[2026-04-12 13:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 13:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 13:44:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 13:44:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 13:44:18] 2.11.2.0 30849 15725 99376 158378 2 211 14948932 25165824 4029 130560 0 9772857 99.890 3413387 5758 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-12 13:44:18] CVMFS is ok
[2026-04-12 13:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 13:44:18] Checking for apptainer binary...
[2026-04-12 13:44:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 13:44:18] Running /usr/bin/apptainer --version
[2026-04-12 13:44:18] apptainer version 1.3.2-1.el7
[2026-04-12 13:44:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 13:44:21] cg-vwn426.simple-grid.lan
[2026-04-12 13:44:21] apptainer works
[2026-04-12 13:44:21] Set ATHENA_PROC_NUMBER=8
[2026-04-12 13:44:21] Set ATHENA_CORE_NUMBER=8
[2026-04-12 13:44:21] Starting ATLAS job with PandaID=7087555160
[2026-04-12 13:44:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 18:09:47]  *** The last 200 lines of the pilot log: ***
[2026-04-12 18:09:47] 2026-04-12 16:09:07,225 | INFO     | log transfer has been attempted: DONE
[2026-04-12 18:09:47] 2026-04-12 16:09:07,225 | INFO     | job 7087555160 has finished - writing final server update
[2026-04-12 18:09:47] 2026-04-12 16:09:07,225 | INFO     | total number of processed events: 400 (read)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,228 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7087555160/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,228 | INFO     | extracted standard info from prmon json
[2026-04-12 18:09:47] 2026-04-12 16:09:07,228 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 18:09:47] 2026-04-12 16:09:07,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 18:09:47] 2026-04-12 16:09:07,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 18:09:47] 2026-04-12 16:09:07,234 | INFO     | fitting pss+swap vs Time
[2026-04-12 18:09:47] 2026-04-12 16:09:07,235 | INFO     | sum of square deviations: 4962187923.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,238 | INFO     | sum of deviations: 85174396715.5
[2026-04-12 18:09:47] 2026-04-12 16:09:07,238 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,238 | INFO     | mean y: 2439300.726190476
[2026-04-12 18:09:47] 2026-04-12 16:09:07,238 | INFO     | intersect: 2439300.726190476
[2026-04-12 18:09:47] 2026-04-12 16:09:07,239 | INFO     | chi2: 5.603172771226871
[2026-04-12 18:09:47] 2026-04-12 16:09:07,239 | INFO     | sum of square deviations: 4672638308.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,245 | INFO     | sum of deviations: 99923769196.99998
[2026-04-12 18:09:47] 2026-04-12 16:09:07,245 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,245 | INFO     | mean y: 2446927.5627530366
[2026-04-12 18:09:47] 2026-04-12 16:09:07,245 | INFO     | intersect: 2446927.5627530366
[2026-04-12 18:09:47] 2026-04-12 16:09:07,246 | INFO     | chi2: 4.8692439569114425
[2026-04-12 18:09:47] 2026-04-12 16:09:07,246 | INFO     | current chi2=4.8692439569114425 (change=13.098450543668083 %)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,246 | INFO     | right removable region: 246
[2026-04-12 18:09:47] 2026-04-12 16:09:07,247 | INFO     | sum of square deviations: 4672638308.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,249 | INFO     | sum of deviations: 1523785428.9999943
[2026-04-12 18:09:47] 2026-04-12 16:09:07,249 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,249 | INFO     | mean y: 2483313.910931174
[2026-04-12 18:09:47] 2026-04-12 16:09:07,250 | INFO     | intersect: 2483313.910931174
[2026-04-12 18:09:47] 2026-04-12 16:09:07,250 | INFO     | chi2: 1.3118349919861414
[2026-04-12 18:09:47] 2026-04-12 16:09:07,250 | INFO     | current chi2=1.3118349919861414 (change=76.58763979717688 %)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,251 | INFO     | sum of square deviations: 4394577280.5
[2026-04-12 18:09:47] 2026-04-12 16:09:07,253 | INFO     | sum of deviations: -18968595593.5
[2026-04-12 18:09:47] 2026-04-12 16:09:07,253 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,253 | INFO     | mean y: 2494450.409090909
[2026-04-12 18:09:47] 2026-04-12 16:09:07,253 | INFO     | intersect: 2494450.409090909
[2026-04-12 18:09:47] 2026-04-12 16:09:07,254 | INFO     | chi2: 0.8682255101457641
[2026-04-12 18:09:47] 2026-04-12 16:09:07,254 | INFO     | current chi2=0.8682255101457641 (change=33.815951285820226 %)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,254 | INFO     | sum of square deviations: 4127772278.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,257 | INFO     | sum of deviations: -15513349199.999998
[2026-04-12 18:09:47] 2026-04-12 16:09:07,257 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,257 | INFO     | mean y: 2492445.2784810127
[2026-04-12 18:09:47] 2026-04-12 16:09:07,257 | INFO     | intersect: 2492445.2784810127
[2026-04-12 18:09:47] 2026-04-12 16:09:07,258 | INFO     | chi2: 0.8486417743775765
[2026-04-12 18:09:47] 2026-04-12 16:09:07,258 | INFO     | current chi2=0.8486417743775765 (change=2.255604740858139 %)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,258 | INFO     | left removable region: 15
[2026-04-12 18:09:47] 2026-04-12 16:09:07,258 | INFO     | sum of square deviations: 3822136780.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,261 | INFO     | sum of deviations: 266089807.99999917
[2026-04-12 18:09:47] 2026-04-12 16:09:07,262 | INFO     | mean x (centered): 0.0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,262 | INFO     | mean y: 2501692.930735931
[2026-04-12 18:09:47] 2026-04-12 16:09:07,262 | INFO     | intersect: 2501692.930735931
[2026-04-12 18:09:47] 2026-04-12 16:09:07,262 | INFO     | chi2: 0.05809918622908093
[2026-04-12 18:09:47] 2026-04-12 16:09:07,263 | INFO     | current memory leak: 0.07 B/s (using 231 data points, chi2=0.06)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,263 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,263 | INFO     | ..............................
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . Timing measurements:
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . get job = 0 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . initial setup = 105 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . payload setup = 165 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . stage-in = 0 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . payload execution = 15468 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . stage-out = 3 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,264 | INFO     | . log creation = 1 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,265 | INFO     | ..............................
[2026-04-12 18:09:47] 2026-04-12 16:09:07,396 | INFO     | 
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | job summary report
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | --------------------------------------------------
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | PanDA job id: 7087555160
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | task id: 49263200
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | errors: (none)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,397 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | pilot state: finished 
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | transexitcode: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | exeerrorcode: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | exeerrordiag: 
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | exitcode: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | exitmsg: OK
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | cpuconsumptiontime: 58370 s
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | nevents: 400
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | neventsw: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:07,398 | INFO     | pid: 1378
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | pgrp: 1378
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | corecount: 8
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | event service: False
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | sizes: {0: 2279062, 1: 2280120, 2: 2281576, 13: 2281576, 15637: 2312689, 15638: 2312688, 15642: 2321870, 15643: 2322120}
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | --------------------------------------------------
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | 
[2026-04-12 18:09:47] 2026-04-12 16:09:07,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-04-12 18:09:47] 2026-04-12 16:09:07,817 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,817 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,819 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 18:09:47] 2026-04-12 16:09:07,820 | INFO     | job 7087555160 has completed (purged errors)
[2026-04-12 18:09:47] 2026-04-12 16:09:07,820 | INFO     | overall cleanup function is called
[2026-04-12 18:09:47] 2026-04-12 16:09:08,828 | INFO     | --- collectZombieJob: --- 10, [1378]
[2026-04-12 18:09:47] 2026-04-12 16:09:08,829 | INFO     | zombie collector waiting for pid 1378
[2026-04-12 18:09:47] 2026-04-12 16:09:08,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 18:09:47] 2026-04-12 16:09:08,829 | INFO     | collected zombie processes
[2026-04-12 18:09:47] 2026-04-12 16:09:08,829 | INFO     | will attempt to kill all subprocesses of pid=1378
[2026-04-12 18:09:47] 2026-04-12 16:09:08,945 | INFO     | process IDs to be killed: [1378] (in reverse order)
[2026-04-12 18:09:47] 2026-04-12 16:09:09,647 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 18:09:47] 2026-04-12 16:09:09,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 18:09:47] 2026-04-12 16:09:09,651 | INFO     | did not find any defunct processes belonging to 1378
[2026-04-12 18:09:47] 2026-04-12 16:09:09,654 | INFO     | did not find any defunct processes belonging to 1378
[2026-04-12 18:09:47] 2026-04-12 16:09:09,654 | INFO     | Ready for new job
[2026-04-12 18:09:47] 2026-04-12 16:09:09,656 | INFO     | **************************************
[2026-04-12 18:09:47] 2026-04-12 16:09:09,656 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 18:09:47] 2026-04-12 16:09:09,656 | INFO     | **************************************
[2026-04-12 18:09:47] 2026-04-12 16:09:09,656 | INFO     | 
[2026-04-12 18:09:47] 2026-04-12 16:09:09,657 | INFO     | pilot is running in a VM
[2026-04-12 18:09:47] 2026-04-12 16:09:09,657 | INFO     | architecture information:
[2026-04-12 18:09:47] 2026-04-12 16:09:09,663 | INFO     | executing command: cat /etc/os-release
[2026-04-12 18:09:47] 2026-04-12 16:09:09,855 | INFO     | cat /etc/os-release:
[2026-04-12 18:09:47] NAME="CentOS Linux"
[2026-04-12 18:09:47] VERSION="7 (Core)"
[2026-04-12 18:09:47] ID="centos"
[2026-04-12 18:09:47] ID_LIKE="rhel fedora"
[2026-04-12 18:09:47] VERSION_ID="7"
[2026-04-12 18:09:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 18:09:47] ANSI_COLOR="0;31"
[2026-04-12 18:09:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 18:09:47] HOME_URL="https://www.centos.org/"
[2026-04-12 18:09:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 18:09:47] 
[2026-04-12 18:09:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 18:09:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 18:09:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 18:09:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 18:09:47] 
[2026-04-12 18:09:47] 2026-04-12 16:09:09,856 | INFO     | **************************************
[2026-04-12 18:09:47] 2026-04-12 16:09:10,360 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-04-12 18:09:47] 2026-04-12 16:09:10,537 | INFO     | sufficient remaining disk space (496337158144 B)
[2026-04-12 18:09:47] 2026-04-12 16:09:10,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 18:09:47] 2026-04-12 16:09:10,538 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 18:09:47] 2026-04-12 16:09:10,538 | INFO     | update_server=False
[2026-04-12 18:09:47] 2026-04-12 16:09:10,538 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 18:09:47] 2026-04-12 16:09:10,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 18:09:47] 2026-04-12 16:09:10,548 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-12 18:09:47] 2026-04-12 16:09:10,549 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-12 18:09:47] 2026-04-12 16:09:10,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 18:09:47] 2026-04-12 16:09:10,549 | INFO     | will abort loop
[2026-04-12 18:09:47] 2026-04-12 16:09:10,572 | INFO     | all data control threads have been joined
[2026-04-12 18:09:47] 2026-04-12 16:09:11,123 | INFO     | all payload control threads have been joined
[2026-04-12 18:09:47] 2026-04-12 16:09:11,425 | INFO     | all job control threads have been joined
[2026-04-12 18:09:47] 2026-04-12 16:09:11,544 | INFO     | [job] retrieve thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:11,555 | INFO     | [job] job monitor thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:11,579 | INFO     | [data] control thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:11,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:11,667 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:11,691 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,025 | INFO     | [job] validate thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,130 | INFO     | [payload] control thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,336 | INFO     | [data] copytool_in thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,398 | INFO     | [payload] validate_post thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 18:09:47] 2026-04-12 16:09:12,432 | INFO     | [job] control thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,520 | INFO     | [payload] failed_post thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,546 | INFO     | [data] copytool_out thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:12,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 18:09:47] 2026-04-12 16:09:12,914 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:13,411 | INFO     | [job] queue monitor thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:16,744 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 18:09:47] 2026-04-12 16:09:37,819 | INFO     | [monitor] cgroup control has ended
[2026-04-12 18:09:47] 2026-04-12 16:09:39,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564658227008)>', '<ExcThread(monitor, started 140563995154176)>']
[2026-04-12 18:09:47] 2026-04-12 16:09:39,281 | INFO     | PID=29240 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-12 18:09:47] 2026-04-12 16:09:39,281 | INFO     | .. there are 9 such processes running
[2026-04-12 18:09:47] 2026-04-12 16:09:39,282 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 18:09:47] 2026-04-12 16:09:39,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 18:09:47] 2026-04-12 16:09:39,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 18:09:47] 2026-04-12 16:09:39,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 18:09:47] 2026-04-12 16:09:39,282 | INFO     | [monitor] control thread has ended
[2026-04-12 18:09:47] 2026-04-12 16:09:44,155 | INFO     | all workflow threads have been joined
[2026-04-12 18:09:47] 2026-04-12 16:09:44,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 18:09:47] 2026-04-12 16:09:44,156 | INFO     | traces error code: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:44,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 18:09:47] 2026-04-12 16:09:44,520 [wrapper] ==== pilot stdout END ====
[2026-04-12 18:09:47] 2026-04-12 16:09:44,591 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 18:09:47] 2026-04-12 16:09:44,667 [wrapper] pilotpid: 29240
[2026-04-12 18:09:47] 2026-04-12 16:09:44,753 [wrapper] Pilot exit status: 0
[2026-04-12 18:09:47] 2026-04-12 16:09:45,010 [wrapper] pandaids: 7087555160
[2026-04-12 18:09:47] 2026-04-12 16:09:45,448 [wrapper] cleanup supervisor_pilot 24958 29241
[2026-04-12 18:09:47] 2026-04-12 16:09:45,529 [wrapper] Test setup, not cleaning
[2026-04-12 18:09:47] 2026-04-12 16:09:45,628 [wrapper] apfmon messages muted
[2026-04-12 18:09:47] 2026-04-12 16:09:45,698 [wrapper] ==== wrapper stdout END ====
[2026-04-12 18:09:47] 2026-04-12 16:09:45,717 [wrapper] ==== wrapper stderr END ====
[2026-04-12 18:09:47]  *** Error codes and diagnostics ***
[2026-04-12 18:09:47]     "exeErrorCode": 0,
[2026-04-12 18:09:47]     "pilotErrorCode": 0,
[2026-04-12 18:09:47]  *** Listing of results directory ***
[2026-04-12 18:09:47] total 416672
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc    644190 Apr 12 01:36 pilot3.tar.gz
[2026-04-12 18:09:47] -rwx------. 1 boinc boinc     36322 Apr 12 02:18 runpilot2-wrapper.sh
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc      5094 Apr 12 02:23 queuedata.json
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc       100 Apr 12 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 18:09:47] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 13:44 run_atlas
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc       105 Apr 12 13:44 job.xml
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc      6306 Apr 12 13:44 init_data.xml
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc 222906023 Apr 12 13:44 EVNT.49263198._001179.pool.root.1
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc     15665 Apr 12 13:44 start_atlas.sh
[2026-04-12 18:09:47] drwxrwx--x. 2 boinc boinc        68 Apr 12 13:44 shared
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc    656930 Apr 12 13:44 input.tar.gz
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc         0 Apr 12 13:44 boinc_lockfile
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc      2576 Apr 12 13:44 pandaJob.out
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc       415 Apr 12 13:48 workernode_map.json
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc    997759 Apr 12 13:48 agis_schedconf.cvmfs.json
[2026-04-12 18:09:47] drwx------. 5 boinc boinc      4096 Apr 12 13:48 pilot3
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc 196008738 Apr 12 18:07 HITS.49263200._047280.pool.root.1
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc       488 Apr 12 18:08 boinc_task_state.xml
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc      1016 Apr 12 18:08 memory_monitor_summary.json
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc   1511579 Apr 12 18:09 agis_ddmendpoints.agis.ALL.json
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc    422252 Apr 12 18:09 log.49263200._047280.job.log.tgz.1
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc      6340 Apr 12 18:09 heartbeat_new.json
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc      6231 Apr 12 18:09 heartbeat.json
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc      8192 Apr 12 18:09 boinc_mmap_file
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc        28 Apr 12 18:09 wrapper_checkpoint.txt
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc        95 Apr 12 18:09 pilot_heartbeat.json
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc      5065 Apr 12 18:09 pilotlog.txt
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc   1429751 Apr 12 18:09 log.49263200._047280.job.log.1
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc       357 Apr 12 18:09 output.list
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc       410 Apr 12 18:09 runtime_log
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc   1873920 Apr 12 18:09 result.tar.gz
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc      8438 Apr 12 18:09 runtime_log.err
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc       655 Apr 12 18:09 e4ebe71c6f0a.diag
[2026-04-12 18:09:47] -rw-r--r--. 1 boinc boinc     20622 Apr 12 18:09 stderr.txt
[2026-04-12 18:09:47] HITS file was successfully produced:
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc 196008738 Apr 12 18:07 shared/HITS.pool.root.1
[2026-04-12 18:09:47]  *** Contents of shared directory: ***
[2026-04-12 18:09:47] total 411592
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc 222906023 Apr 12 13:44 ATLAS.root_0
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc     15665 Apr 12 13:44 start_atlas.sh
[2026-04-12 18:09:47] -rw-r--r--. 2 boinc boinc    656930 Apr 12 13:44 input.tar.gz
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc 196008738 Apr 12 18:07 HITS.pool.root.1
[2026-04-12 18:09:47] -rw-------. 1 boinc boinc   1873920 Apr 12 18:09 result.tar.gz
18:09:48 (25441): run_atlas exited; CPU time 58604.187850
18:09:48 (25441): called boinc_finish(0)

</stderr_txt>
]]>

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