Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:02:41 (1792065): wrapper (7.7.26015): starting
20:02:41 (1792065): wrapper: running run_atlas (--nthreads 3)
[2026-04-12 20:02:41] Arguments: --nthreads 3
[2026-04-12 20:02:41] Threads: 3
[2026-04-12 20:02:41] Checking for CVMFS
[2026-04-12 20:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 20:02:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 20:02:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 20:02:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 20:02:42] 2.9.2.0 1148888 4028 80504 158386 0 50 33219966 36864001 0 130560 0 2476923 99.988 151368 14458 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-12 20:02:42] CVMFS is ok
[2026-04-12 20:02:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 20:02:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 20:02:42] Further information can be found at the LHC@home message board.
[2026-04-12 20:02:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 20:02:42] Checking for apptainer binary...
[2026-04-12 20:02:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 20:02:42] Running /usr/bin/apptainer --version
[2026-04-12 20:02:42] apptainer version 1.4.1-1.1
[2026-04-12 20:02:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 20:02:42] belleA253
[2026-04-12 20:02:42] apptainer works
[2026-04-12 20:02:42] Set ATHENA_PROC_NUMBER=3
[2026-04-12 20:02:42] Set ATHENA_CORE_NUMBER=3
[2026-04-12 20:02:42] Starting ATLAS job with PandaID=7087766051
[2026-04-12 20:02:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 21:28:05]  *** The last 200 lines of the pilot log: ***
[2026-04-12 21:28:05] 2026-04-12 19:27:20,637 | INFO     | [job] queue monitor thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:20,637 | INFO     | [job] retrieve thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:20,638 | INFO     | [job] job monitor thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:20,661 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:20,721 | INFO     | all job control threads have been joined
[2026-04-12 21:28:05] 2026-04-12 19:27:20,963 | INFO     | [payload] control thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:20,991 | INFO     | [payload] validate_post thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 21:28:05] 2026-04-12 19:27:21,116 | INFO     | [data] control thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,189 | INFO     | [job] validate thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,288 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,302 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,438 | INFO     | [data] copytool_in thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,454 | INFO     | [payload] failed_post thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:21,727 | INFO     | [job] control thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:22,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 21:28:05] 2026-04-12 19:27:23,070 | INFO     | [data] copytool_out thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:26,722 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 21:28:05] 2026-04-12 19:27:48,346 | INFO     | 5068s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-12 21:28:05] 2026-04-12 19:27:49,404 | INFO     | PID=1796113 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 21:28:05] 2026-04-12 19:27:49,404 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 21:28:05] 2026-04-12 19:27:49,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 21:28:05] 2026-04-12 19:27:49,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 21:28:05] 2026-04-12 19:27:59,564 | INFO     | [monitor] cgroup control has ended
[2026-04-12 21:28:05] 2026-04-12 19:28:00,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108405868352)>', '<ExcThread(monitor, started 140107361265408)>']
[2026-04-12 21:28:05] 2026-04-12 19:28:00,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 21:28:05] 2026-04-12 19:28:00,459 | INFO     | [monitor] control thread has ended
[2026-04-12 21:28:05] 2026-04-12 19:28:05,428 | INFO     | all workflow threads have been joined
[2026-04-12 21:28:05] 2026-04-12 19:28:05,429 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 21:28:05] 2026-04-12 19:28:05,429 | INFO     | traces error code: 0
[2026-04-12 21:28:05] 2026-04-12 19:28:05,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 21:28:05] 2026-04-12 19:28:05,480 [wrapper] ==== pilot stdout END ====
[2026-04-12 21:28:05] 2026-04-12 19:28:05,483 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 21:28:05] 2026-04-12 19:28:05,486 [wrapper] pilotpid: 1796113
[2026-04-12 21:28:05] 2026-04-12 19:28:05,488 [wrapper] Pilot exit status: 0
[2026-04-12 21:28:05] 2026-04-12 19:28:05,496 [wrapper] pandaids: 7087766051
[2026-04-12 21:28:05] 2026-04-12 19:28:05,513 [wrapper] cleanup supervisor_pilot 1805627 1796114
[2026-04-12 21:28:05] 2026-04-12 19:28:05,516 [wrapper] Test setup, not cleaning
[2026-04-12 21:28:05] 2026-04-12 19:28:05,518 [wrapper] apfmon messages muted
[2026-04-12 21:28:05] 2026-04-12 19:28:05,521 [wrapper] ==== wrapper stdout END ====
[2026-04-12 21:28:05] 2026-04-12 19:28:05,523 [wrapper] ==== wrapper stderr END ====
[2026-04-12 21:28:05]  *** Error codes and diagnostics ***
[2026-04-12 21:28:05]     "exeErrorCode": 0,
[2026-04-12 21:28:05]     "pilotErrorCode": 0,
[2026-04-12 21:28:05]  *** Listing of results directory ***
[2026-04-12 21:28:05] total 419752
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc    644190 Apr 12 06:40 pilot3.tar.gz
[2026-04-12 21:28:05] -rwx------ 1 boinc boinc     36322 Apr 12 06:43 runpilot2-wrapper.sh
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      5094 Apr 12 06:44 queuedata.json
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc       100 Apr 12 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 21:28:05] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 20:02 run_atlas
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc       105 Apr 12 20:02 job.xml
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc 225116783 Apr 12 20:02 EVNT.49263198._001302.pool.root.1
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc    656930 Apr 12 20:02 input.tar.gz
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc     15665 Apr 12 20:02 start_atlas.sh
[2026-04-12 21:28:05] drwxrwx--x 2 boinc boinc      4096 Apr 12 20:02 shared
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc         0 Apr 12 20:02 boinc_setup_complete
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      6363 Apr 12 20:02 init_data.xml
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc         0 Apr 12 20:02 boinc_lockfile
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      2576 Apr 12 20:02 pandaJob.out
[2026-04-12 21:28:05] -rw------- 1 boinc boinc    997759 Apr 12 20:02 agis_schedconf.cvmfs.json
[2026-04-12 21:28:05] -rw------- 1 boinc boinc   1511579 Apr 12 20:02 agis_ddmendpoints.agis.ALL.json
[2026-04-12 21:28:05] -rw------- 1 boinc boinc       426 Apr 12 20:02 workernode_map.json
[2026-04-12 21:28:05] drwx------ 5 boinc boinc      4096 Apr 12 20:02 pilot3
[2026-04-12 21:28:05] -rw------- 1 boinc boinc 199227245 Apr 12 21:26 HITS.49263200._050474.pool.root.1
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc       487 Apr 12 21:27 boinc_task_state.xml
[2026-04-12 21:28:05] -rw------- 1 boinc boinc      1017 Apr 12 21:27 memory_monitor_summary.json
[2026-04-12 21:28:05] -rw------- 1 boinc boinc        95 Apr 12 21:27 pilot_heartbeat.json
[2026-04-12 21:28:05] -rw------- 1 boinc boinc    222373 Apr 12 21:27 log.49263200._050474.job.log.tgz.1
[2026-04-12 21:28:05] -rw------- 1 boinc boinc      6326 Apr 12 21:27 heartbeat_new.json
[2026-04-12 21:28:05] -rw------- 1 boinc boinc      6217 Apr 12 21:27 heartbeat.json
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc        27 Apr 12 21:28 wrapper_checkpoint.txt
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      8192 Apr 12 21:28 boinc_mmap_file
[2026-04-12 21:28:05] -rw------- 1 boinc boinc      4934 Apr 12 21:28 pilotlog.txt
[2026-04-12 21:28:05] -rw------- 1 boinc boinc    495394 Apr 12 21:28 log.49263200._050474.job.log.1
[2026-04-12 21:28:05] -rw------- 1 boinc boinc       357 Apr 12 21:28 output.list
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc       410 Apr 12 21:28 runtime_log
[2026-04-12 21:28:05] -rw------- 1 boinc boinc    737280 Apr 12 21:28 result.tar.gz
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      8533 Apr 12 21:28 runtime_log.err
[2026-04-12 21:28:05] -rw------- 1 boinc boinc       660 Apr 12 21:28 22d5b260d6e4.diag
[2026-04-12 21:28:05] -rw-r--r-- 1 boinc boinc      6708 Apr 12 21:28 stderr.txt
[2026-04-12 21:28:05] HITS file was successfully produced:
[2026-04-12 21:28:05] -rw------- 1 boinc boinc 199227245 Apr 12 21:26 shared/HITS.pool.root.1
[2026-04-12 21:28:05]  *** Contents of shared directory: ***
[2026-04-12 21:28:05] total 415792
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc 225116783 Apr 12 20:02 ATLAS.root_0
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc    656930 Apr 12 20:02 input.tar.gz
[2026-04-12 21:28:05] -rw-r--r-- 2 boinc boinc     15665 Apr 12 20:02 start_atlas.sh
[2026-04-12 21:28:05] -rw------- 1 boinc boinc 199227245 Apr 12 21:26 HITS.pool.root.1
[2026-04-12 21:28:05] -rw------- 1 boinc boinc    737280 Apr 12 21:28 result.tar.gz
21:28:07 (1792065): run_atlas exited; CPU time 14256.143119
21:28:07 (1792065): called boinc_finish(0)

</stderr_txt>
]]>

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