Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:37 (959671): wrapper (7.7.26015): starting
00:03:37 (959671): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 00:03:37] Arguments: --nthreads 8
[2026-04-12 00:03:37] Threads: 8
[2026-04-12 00:03:37] Checking for CVMFS
[2026-04-12 00:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 00:03:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 00:03:39] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 00:03:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 00:03:41] 2.13.3.0 9262 226691 192432 158366 3 200 24717297 32935936 29356 16776704 0 993556645 99.693 769764062 31865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-12 00:03:41] CVMFS is ok
[2026-04-12 00:03:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 00:03:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 00:03:41] Further information can be found at the LHC@home message board.
[2026-04-12 00:03:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 00:03:41] Checking for apptainer binary...
[2026-04-12 00:03:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 00:03:41] Running /usr/bin/apptainer --version
[2026-04-12 00:03:41] apptainer version 1.4.5-2.el9
[2026-04-12 00:03:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 00:03:43] c-8-32.aglt2.org
[2026-04-12 00:03:43] apptainer works
[2026-04-12 00:03:43] Set ATHENA_PROC_NUMBER=8
[2026-04-12 00:03:43] Set ATHENA_CORE_NUMBER=8
[2026-04-12 00:03:44] Starting ATLAS job with PandaID=7089800291
[2026-04-12 00:03:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-14 14:53:58]  *** The last 200 lines of the pilot log: ***
[2026-04-14 14:53:58] 2026-04-14 18:53:18,737 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:18,737 | INFO     | mean y: 2498304.3242219216
[2026-04-14 14:53:58] 2026-04-14 18:53:18,737 | INFO     | intersect: 2498304.3242219216
[2026-04-14 14:53:58] 2026-04-14 18:53:18,751 | INFO     | chi2: 12.3843527829118
[2026-04-14 14:53:58] 2026-04-14 18:53:18,752 | INFO     | current chi2=12.3843527829118 (change=10.981667084411013 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:18,752 | INFO     | right removable region: 3694
[2026-04-14 14:53:58] 2026-04-14 18:53:18,774 | INFO     | sum of square deviations: 15642172137482.137
[2026-04-14 14:53:58] 2026-04-14 18:53:19,924 | INFO     | sum of deviations: 13778877312112.568
[2026-04-14 14:53:58] 2026-04-14 18:53:19,924 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:19,924 | INFO     | mean y: 2500406.1315290933
[2026-04-14 14:53:58] 2026-04-14 18:53:19,925 | INFO     | intersect: 2500406.1315290933
[2026-04-14 14:53:58] 2026-04-14 18:53:19,929 | INFO     | chi2: 9.293876265462517
[2026-04-14 14:53:58] 2026-04-14 18:53:19,930 | INFO     | current chi2=9.293876265462517 (change=33.1959137487754 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:19,934 | INFO     | sum of square deviations: 15578752725488.42
[2026-04-14 14:53:58] 2026-04-14 18:53:20,139 | INFO     | PID=975745 has CPU usage=18.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-14 14:53:58] 2026-04-14 18:53:20,140 | INFO     | .. there are 31 such processes running
[2026-04-14 14:53:58] 2026-04-14 18:53:20,483 | INFO     | sum of deviations: 12718839095544.92
[2026-04-14 14:53:58] 2026-04-14 18:53:20,488 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:20,488 | INFO     | mean y: 2502955.0452574524
[2026-04-14 14:53:58] 2026-04-14 18:53:20,488 | INFO     | intersect: 2502955.0452574524
[2026-04-14 14:53:58] 2026-04-14 18:53:20,497 | INFO     | chi2: 6.488154715758549
[2026-04-14 14:53:58] 2026-04-14 18:53:20,497 | INFO     | current chi2=6.488154715758549 (change=30.188927306149573 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:20,502 | INFO     | sum of square deviations: 15515504944985.607
[2026-04-14 14:53:58] 2026-04-14 18:53:20,879 | INFO     | sum of deviations: 11823366819980.23
[2026-04-14 14:53:58] 2026-04-14 18:53:20,879 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:20,879 | INFO     | mean y: 2505114.0843962007
[2026-04-14 14:53:58] 2026-04-14 18:53:20,880 | INFO     | intersect: 2505114.0843962007
[2026-04-14 14:53:58] 2026-04-14 18:53:20,884 | INFO     | chi2: 4.522994784712684
[2026-04-14 14:53:58] 2026-04-14 18:53:20,885 | INFO     | current chi2=4.522994784712684 (change=30.288425864334716 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:20,889 | INFO     | sum of square deviations: 15452428563045.322
[2026-04-14 14:53:58] 2026-04-14 18:53:21,178 | INFO     | monitor loop #11274: job 0:7089800291 is in state 'finished'
[2026-04-14 14:53:58] 2026-04-14 18:53:21,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-14 14:53:58] 2026-04-14 18:53:21,231 | INFO     | sum of deviations: 11128669089774.45
[2026-04-14 14:53:58] 2026-04-14 18:53:21,231 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:21,231 | INFO     | mean y: 2506793.5448369565
[2026-04-14 14:53:58] 2026-04-14 18:53:21,231 | INFO     | intersect: 2506793.5448369565
[2026-04-14 14:53:58] 2026-04-14 18:53:21,236 | INFO     | chi2: 3.3669132976607896
[2026-04-14 14:53:58] 2026-04-14 18:53:21,237 | INFO     | current chi2=3.3669132976607896 (change=25.56008888091903 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:21,241 | INFO     | sum of square deviations: 15389523796553.354
[2026-04-14 14:53:58] 2026-04-14 18:53:21,804 | INFO     | sum of deviations: 10726110958751.541
[2026-04-14 14:53:58] 2026-04-14 18:53:21,804 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:21,804 | INFO     | mean y: 2507769.476462585
[2026-04-14 14:53:58] 2026-04-14 18:53:21,804 | INFO     | intersect: 2507769.476462585
[2026-04-14 14:53:58] 2026-04-14 18:53:21,809 | INFO     | chi2: 3.0201348325391937
[2026-04-14 14:53:58] 2026-04-14 18:53:21,810 | INFO     | current chi2=3.0201348325391937 (change=10.299595934428284 %)
[2026-04-14 14:53:58] 2026-04-14 18:53:21,810 | INFO     | left removable region: 25
[2026-04-14 14:53:58] 2026-04-14 18:53:21,818 | INFO     | sum of square deviations: 15314267524597.424
[2026-04-14 14:53:58] 2026-04-14 18:53:22,413 | INFO     | sum of deviations: 11187771272985.076
[2026-04-14 14:53:58] 2026-04-14 18:53:22,414 | INFO     | mean x (centered): 0.0
[2026-04-14 14:53:58] 2026-04-14 18:53:22,414 | INFO     | mean y: 2508890.760425184
[2026-04-14 14:53:58] 2026-04-14 18:53:22,414 | INFO     | intersect: 2508890.760425184
[2026-04-14 14:53:58] 2026-04-14 18:53:22,420 | INFO     | chi2: 1.4771738819338014
[2026-04-14 14:53:58] 2026-04-14 18:53:22,420 | INFO     | current memory leak: 0.73 B/s (using 3669 data points, chi2=1.48)
[2026-04-14 14:53:58] 2026-04-14 18:53:22,425 | INFO     | could have reported an average CPU frequency of 2600 MHz (128 samples)
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | ..............................
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . Timing measurements:
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . get job = 1 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . initial setup = 74 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . payload setup = 156 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . stage-in = 1 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . payload execution = 225746 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,426 | INFO     | . stage-out = 4 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,427 | INFO     | . log creation = 1 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,427 | INFO     | ..............................
[2026-04-14 14:53:58] 2026-04-14 18:53:22,554 | INFO     | 
[2026-04-14 14:53:58] 2026-04-14 18:53:22,554 | INFO     | job summary report
[2026-04-14 14:53:58] 2026-04-14 18:53:22,554 | INFO     | --------------------------------------------------
[2026-04-14 14:53:58] 2026-04-14 18:53:22,554 | INFO     | PanDA job id: 7089800291
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | task id: 49176300
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | errors: (none)
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | pilot state: finished 
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | transexitcode: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | exeerrorcode: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | exeerrordiag: 
[2026-04-14 14:53:58] 2026-04-14 18:53:22,555 | INFO     | exitcode: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | exitmsg: OK
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | cpuconsumptiontime: 156539 s
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | nevents: 400
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | neventsw: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | pid: 1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | pgrp: 1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | corecount: 8
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | event service: False
[2026-04-14 14:53:58] 2026-04-14 18:53:22,556 | INFO     | sizes: {0: 2279692, 1: 2279748, 3: 2279804, 4: 2279804, 6: 2279804, 9: 2281761, 22: 2281761, 225907: 2406219, 225912: 2415217, 225913: 2415273, 225921: 2415467}
[2026-04-14 14:53:58] 2026-04-14 18:53:22,557 | INFO     | --------------------------------------------------
[2026-04-14 14:53:58] 2026-04-14 18:53:22,557 | INFO     | 
[2026-04-14 14:53:58] 2026-04-14 18:53:22,557 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-14 14:53:58] 2026-04-14 18:53:22,601 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,601 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,601 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,601 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-14 14:53:58] 2026-04-14 18:53:22,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,604 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-14 14:53:58] 2026-04-14 18:53:22,604 | INFO     | job 7089800291 has completed (purged errors)
[2026-04-14 14:53:58] 2026-04-14 18:53:22,604 | INFO     | overall cleanup function is called
[2026-04-14 14:53:58] 2026-04-14 18:53:23,665 | INFO     | --- collectZombieJob: --- 10, [1003993]
[2026-04-14 14:53:58] 2026-04-14 18:53:23,666 | INFO     | zombie collector waiting for pid 1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:23,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-14 14:53:58] 2026-04-14 18:53:23,666 | INFO     | collected zombie processes
[2026-04-14 14:53:58] 2026-04-14 18:53:23,666 | INFO     | will attempt to kill all subprocesses of pid=1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:24,703 | INFO     | process IDs to be killed: [1003993] (in reverse order)
[2026-04-14 14:53:58] 2026-04-14 18:53:25,109 | WARNING  | found no corresponding commands to process id(s)
[2026-04-14 14:53:58] 2026-04-14 18:53:25,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-14 14:53:58] 2026-04-14 18:53:25,125 | INFO     | did not find any defunct processes belonging to 1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:25,139 | INFO     | did not find any defunct processes belonging to 1003993
[2026-04-14 14:53:58] 2026-04-14 18:53:25,139 | INFO     | Ready for new job
[2026-04-14 14:53:58] 2026-04-14 18:53:25,149 | INFO     | **************************************
[2026-04-14 14:53:58] 2026-04-14 18:53:25,150 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-14 14:53:58] 2026-04-14 18:53:25,150 | INFO     | **************************************
[2026-04-14 14:53:58] 2026-04-14 18:53:25,150 | INFO     | 
[2026-04-14 14:53:58] 2026-04-14 18:53:25,152 | INFO     | architecture information:
[2026-04-14 14:53:58] 2026-04-14 18:53:25,157 | INFO     | executing command: cat /etc/os-release
[2026-04-14 14:53:58] 2026-04-14 18:53:25,260 | INFO     | cat /etc/os-release:
[2026-04-14 14:53:58] NAME="CentOS Linux"
[2026-04-14 14:53:58] VERSION="7 (Core)"
[2026-04-14 14:53:58] ID="centos"
[2026-04-14 14:53:58] ID_LIKE="rhel fedora"
[2026-04-14 14:53:58] VERSION_ID="7"
[2026-04-14 14:53:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-14 14:53:58] ANSI_COLOR="0;31"
[2026-04-14 14:53:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-14 14:53:58] HOME_URL="https://www.centos.org/"
[2026-04-14 14:53:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-14 14:53:58] 
[2026-04-14 14:53:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-14 14:53:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-14 14:53:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-14 14:53:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-14 14:53:58] 
[2026-04-14 14:53:58] 2026-04-14 18:53:25,261 | INFO     | **************************************
[2026-04-14 14:53:58] 2026-04-14 18:53:25,765 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-14 14:53:58] 2026-04-14 18:53:25,835 | INFO     | sufficient remaining disk space (76352061440 B)
[2026-04-14 14:53:58] 2026-04-14 18:53:25,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-14 14:53:58] 2026-04-14 18:53:25,835 | INFO     | current server update state: UPDATING_FINAL
[2026-04-14 14:53:58] 2026-04-14 18:53:25,836 | INFO     | update_server=False
[2026-04-14 14:53:58] 2026-04-14 18:53:25,836 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-14 14:53:58] 2026-04-14 18:53:25,894 | INFO     | all job control threads have been joined
[2026-04-14 14:53:58] 2026-04-14 18:53:25,994 | INFO     | all payload control threads have been joined
[2026-04-14 14:53:58] 2026-04-14 18:53:26,220 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-14 14:53:58] 2026-04-14 18:53:26,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-14 14:53:58] 2026-04-14 18:53:26,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-14 14:53:58] 2026-04-14 18:53:26,221 | INFO     | will abort loop
[2026-04-14 14:53:58] 2026-04-14 18:53:26,469 | INFO     | all data control threads have been joined
[2026-04-14 14:53:58] 2026-04-14 18:53:26,843 | INFO     | [job] retrieve thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:26,901 | INFO     | [job] control thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:26,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-14 14:53:58] 2026-04-14 18:53:27,003 | INFO     | [payload] control thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,227 | INFO     | [job] job monitor thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,268 | INFO     | [payload] execute_payloads thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,340 | INFO     | [payload] failed_post thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,458 | INFO     | [job] validate thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,471 | INFO     | [payload] validate_post thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,476 | INFO     | [data] control thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:27,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-14 14:53:58] 2026-04-14 18:53:27,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:28,229 | INFO     | [data] copytool_in thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:28,247 | INFO     | [job] create_data_payload thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:28,314 | INFO     | [payload] validate_pre thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:28,591 | INFO     | [job] queue monitor thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:28,966 | INFO     | [data] copytool_out thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:29,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-14 14:53:58] 2026-04-14 18:53:33,195 | INFO     | [data] queue_monitor thread has finished
[2026-04-14 14:53:58] 2026-04-14 18:53:49,459 | INFO     | [monitor] cgroup control has ended
[2026-04-14 14:53:58] 2026-04-14 18:53:50,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956241794880)>', '<ExcThread(monitor, started 139955527476992)>']
[2026-04-14 14:53:58] 2026-04-14 18:53:54,953 | INFO     | PID=975745 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | INFO     | .. there are 31 such processes running
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | INFO     | found 0 job(s) in 20 queues
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-14 14:53:58] 2026-04-14 18:53:54,954 | INFO     | [monitor] control thread has ended
[2026-04-14 14:53:58] 2026-04-14 18:53:55,973 | INFO     | all workflow threads have been joined
[2026-04-14 14:53:58] 2026-04-14 18:53:55,974 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-14 14:53:58] 2026-04-14 18:53:55,974 | INFO     | traces error code: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:55,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-14 14:53:58] 2026-04-14 18:53:56,607 [wrapper] ==== pilot stdout END ====
[2026-04-14 14:53:58] 2026-04-14 18:53:56,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-14 14:53:58] 2026-04-14 18:53:56,666 [wrapper] pilotpid: 975745
[2026-04-14 14:53:58] 2026-04-14 18:53:56,684 [wrapper] Pilot exit status: 0
[2026-04-14 14:53:58] 2026-04-14 18:53:56,848 [wrapper] pandaids: 7089800291
[2026-04-14 14:53:58] 2026-04-14 18:53:57,092 [wrapper] cleanup supervisor_pilot 2612205 975746
[2026-04-14 14:53:58] 2026-04-14 18:53:57,114 [wrapper] Test setup, not cleaning
[2026-04-14 14:53:58] 2026-04-14 18:53:57,126 [wrapper] apfmon messages muted
[2026-04-14 14:53:58] 2026-04-14 18:53:57,130 [wrapper] ==== wrapper stdout END ====
[2026-04-14 14:53:58] 2026-04-14 18:53:57,163 [wrapper] ==== wrapper stderr END ====
[2026-04-14 14:53:58]  *** Error codes and diagnostics ***
[2026-04-14 14:53:58]     "exeErrorCode": 0,
[2026-04-14 14:53:58]     "pilotErrorCode": 0,
[2026-04-14 14:53:58]  *** Listing of results directory ***
[2026-04-14 14:53:58] total 530940
[2026-04-14 14:53:58] -rwx------. 1 boincer umatlas     36322 Apr 11 22:08 runpilot2-wrapper.sh
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas      5094 Apr 11 22:09 queuedata.json
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas    644190 Apr 11 22:09 pilot3.tar.gz
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas       100 Apr 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-14 14:53:58] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 12 00:03 run_atlas
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas       105 Apr 12 00:03 job.xml
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas 247786137 Apr 12 00:03 EVNT.49133402._000028.pool.root.1
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 00:03 start_atlas.sh
[2026-04-14 14:53:58] drwxrwx--x. 2 boincer umatlas      4096 Apr 12 00:03 shared
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas    656920 Apr 12 00:03 input.tar.gz
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas         0 Apr 12 00:03 boinc_lockfile
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas      2573 Apr 12 00:03 pandaJob.out
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas        57 Apr 12 00:03 setup.sh.local
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas       440 Apr 12 00:07 workernode_map.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas    997751 Apr 12 00:07 agis_schedconf.cvmfs.json
[2026-04-14 14:53:58] drwx------. 5 boincer umatlas      4096 Apr 12 00:07 pilot3
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas      6625 Apr 14 14:47 init_data.xml
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas 256131240 Apr 14 14:51 HITS.49176300._002224.pool.root.1
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas       490 Apr 14 14:51 boinc_task_state.xml
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas        95 Apr 14 14:52 pilot_heartbeat.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas      1069 Apr 14 14:53 memory_monitor_summary.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas   1511579 Apr 14 14:53 agis_ddmendpoints.agis.ALL.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas   2002784 Apr 14 14:53 log.49176300._002224.job.log.tgz.1
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas      6456 Apr 14 14:53 heartbeat_new.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas      6347 Apr 14 14:53 heartbeat.json
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas      5004 Apr 14 14:53 pilotlog.txt
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas  15846123 Apr 14 14:53 log.49176300._002224.job.log.1
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas       357 Apr 14 14:53 output.list
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas        29 Apr 14 14:53 wrapper_checkpoint.txt
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas      8192 Apr 14 14:53 boinc_mmap_file
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas       410 Apr 14 14:53 runtime_log
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas  17868800 Apr 14 14:53 result.tar.gz
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas      8955 Apr 14 14:53 runtime_log.err
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas       666 Apr 14 14:53 fea2fde2977b.diag
[2026-04-14 14:53:58] -rw-r--r--. 1 boincer umatlas     21138 Apr 14 14:53 stderr.txt
[2026-04-14 14:53:58] HITS file was successfully produced:
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas 256131240 Apr 14 14:51 shared/HITS.pool.root.1
[2026-04-14 14:53:58]  *** Contents of shared directory: ***
[2026-04-14 14:53:58] total 510232
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas 247786137 Apr 12 00:03 ATLAS.root_0
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas     15665 Apr 12 00:03 start_atlas.sh
[2026-04-14 14:53:58] -rw-r--r--. 2 boincer umatlas    656920 Apr 12 00:03 input.tar.gz
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas 256131240 Apr 14 14:51 HITS.pool.root.1
[2026-04-14 14:53:58] -rw-------. 1 boincer umatlas  17868800 Apr 14 14:53 result.tar.gz
14:54:20 (959671): run_atlas exited; CPU time 167494.655507
14:54:20 (959671): called boinc_finish(0)

</stderr_txt>
]]>

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