Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:36:49 (19184): wrapper (7.7.26015): starting
02:36:49 (19184): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 02:36:49] Arguments: --nthreads 8
[2026-04-12 02:36:49] Threads: 8
[2026-04-12 02:36:49] Checking for CVMFS
[2026-04-12 02:36:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 02:36:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 02:36:49] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 02:36:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 02:36:49] 2.11.0.0 4577 262069 83888 158361 1 188 3885965 4096000 1834 130560 6 21916453 99.631 18451700 450 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-12 02:36:49] CVMFS is ok
[2026-04-12 02:36:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 02:36:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 02:36:49] Further information can be found at the LHC@home message board.
[2026-04-12 02:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 02:36:49] Checking for apptainer binary...
[2026-04-12 02:36:49] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-12 02:36:49] apptainer is not installed, using version from CVMFS
[2026-04-12 02:36:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 02:36:50] WARNING: Environment variable TMPDIR already has value [/tmp/job_11492084/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node326
[2026-04-12 02:36:50] apptainer works
[2026-04-12 02:36:50] Set ATHENA_PROC_NUMBER=8
[2026-04-12 02:36:50] Set ATHENA_CORE_NUMBER=8
[2026-04-12 02:36:50] Starting ATLAS job with PandaID=7087159281
[2026-04-12 02:36:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11492084/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 03:23:06]  *** The last 200 lines of the pilot log: ***
[2026-04-12 03:23:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-12 03:23:06]  is_altstaged=None
[2026-04-12 03:23:06]  is_tar=False
[2026-04-12 03:23:06]  lfn=log.49263208._037431.job.log.tgz.1
[2026-04-12 03:23:06]  mtime=0
[2026-04-12 03:23:06]  protocol_id=None
[2026-04-12 03:23:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-12 03:23:06]  replicas=None
[2026-04-12 03:23:06]  scope=mc23_13p6TeV
[2026-04-12 03:23:06]  status=None
[2026-04-12 03:23:06]  status_code=0
[2026-04-12 03:23:06]  storage_token=
[2026-04-12 03:23:06]  surl=/tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/log.49263208._037431.job.log.tgz.1
[2026-04-12 03:23:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/33/log.49263208._037431.job.log.tgz.1
[2026-04-12 03:23:06]  workdir=None
[2026-04-12 03:23:06] ]
[2026-04-12 03:23:06] 2026-04-12 01:22:27,382 | INFO     | transferring file log.49263208._037431.job.log.tgz.1 from /tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/log.49263208._037431.job.log.tgz.1 to /tmp/j
[2026-04-12 03:23:06] 2026-04-12 01:22:27,382 | INFO     | executing command: /usr/bin/env mv /tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/log.49263208._037431.job.log.tgz.1 /tmp/job_11492084/atlas/pilot/sl
[2026-04-12 03:23:06] 2026-04-12 01:22:27,390 | INFO     | adding to output.list: log.49263208._037431.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/33/log.49263208._037431.job.log.tg
[2026-04-12 03:23:06] 2026-04-12 01:22:27,391 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-12 03:23:06] 2026-04-12 01:22:27,391 | INFO     | summary of transferred files:
[2026-04-12 03:23:06] 2026-04-12 01:22:27,391 | INFO     |  -- lfn=log.49263208._037431.job.log.tgz.1, status_code=0, status=transferred
[2026-04-12 03:23:06] 2026-04-12 01:22:27,391 | INFO     | stage-out finished correctly
[2026-04-12 03:23:06] 2026-04-12 01:22:28,332 | WARNING  | process 29448 can no longer be monitored (due to stat problems) - aborting
[2026-04-12 03:23:06] 2026-04-12 01:22:28,332 | INFO     | using path: /tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 03:23:06] 2026-04-12 01:22:28,414 | INFO     | number of running child processes to parent process 29448: 1
[2026-04-12 03:23:06] 2026-04-12 01:22:28,414 | INFO     | maximum number of monitored processes: 6
[2026-04-12 03:23:06] 2026-04-12 01:22:30,916 | INFO     | monitor loop #208: job 0:7087159281 is in state 'finished'
[2026-04-12 03:23:06] 2026-04-12 01:22:30,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-12 03:23:06] 2026-04-12 01:22:30,931 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 03:23:06] 2026-04-12 01:22:33,419 | INFO     | monitor loop #209: job 0:7087159281 is in state 'finished'
[2026-04-12 03:23:06] 2026-04-12 01:22:33,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,951 | INFO     | job 7087159281 has state=finished
[2026-04-12 03:23:06] 2026-04-12 01:22:33,951 | INFO     | preparing for final server update for job 7087159281 in state='finished'
[2026-04-12 03:23:06] 2026-04-12 01:22:33,951 | INFO     | reading metadata from: /tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/jobReport.json
[2026-04-12 03:23:06] 2026-04-12 01:22:33,952 | INFO     | added worker_node to metadata from /tmp/job_11492084/atlas/pilot/slots/0/workernode_map.json
[2026-04-12 03:23:06] 2026-04-12 01:22:33,953 | INFO     | this job has now completed (state=finished)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,953 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,953 | INFO     | log transfer has been attempted: DONE
[2026-04-12 03:23:06] 2026-04-12 01:22:33,953 | INFO     | job 7087159281 has finished - writing final server update
[2026-04-12 03:23:06] 2026-04-12 01:22:33,953 | INFO     | total number of processed events: 400 (read)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,970 | INFO     | using path: /tmp/job_11492084/atlas/pilot/slots/0/PanDA_Pilot-7087159281/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,970 | INFO     | extracted standard info from prmon json
[2026-04-12 03:23:06] 2026-04-12 01:22:33,970 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 03:23:06] 2026-04-12 01:22:33,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 03:23:06] 2026-04-12 01:22:33,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | fitting pss+swap vs Time
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | sum of square deviations: 17003109.5
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | sum of deviations: -567422579.5
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | mean x (centered): 0.0
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | mean y: 2636514.289473684
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | intersect: 2636514.289473684
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | chi2: 0.009393083226038245
[2026-04-12 03:23:06] 2026-04-12 01:22:33,971 | INFO     | current memory leak: -33.37 B/s (using 38 data points, chi2=0.01)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | could have reported an average CPU frequency of 2623 MHz (5 samples)
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | ..............................
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . Timing measurements:
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . get job = 0 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . initial setup = 2 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . payload setup = 3 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . stage-in = 0 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . payload execution = 2712 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . stage-out = 0 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | . log creation = 0 s
[2026-04-12 03:23:06] 2026-04-12 01:22:33,972 | INFO     | ..............................
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | 
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | job summary report
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | --------------------------------------------------
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | PanDA job id: 7087159281
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | task id: 49263208
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | errors: (none)
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | pilot state: finished 
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | transexitcode: 0
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | exeerrorcode: 0
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | exeerrordiag: 
[2026-04-12 03:23:06] 2026-04-12 01:22:34,019 | INFO     | exitcode: 0
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | exitmsg: OK
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | cpuconsumptiontime: 19927 s
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | nevents: 400
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | neventsw: 0
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | pid: 29448
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | pgrp: 29448
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | corecount: 8
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | event service: False
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | sizes: {0: 2281644, 11: 2281644, 2719: 2316085, 2723: 2316085, 2726: 2316311}
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | --------------------------------------------------
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | 
[2026-04-12 03:23:06] 2026-04-12 01:22:34,020 | INFO     | executing command: ls -lF /tmp/job_11492084/atlas/pilot/slots/0
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 03:23:06] 2026-04-12 01:22:34,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 03:23:06] 2026-04-12 01:22:34,031 | INFO     | job 7087159281 has completed (purged errors)
[2026-04-12 03:23:06] 2026-04-12 01:22:34,031 | INFO     | overall cleanup function is called
[2026-04-12 03:23:06] 2026-04-12 01:22:35,037 | INFO     | --- collectZombieJob: --- 10, [29448]
[2026-04-12 03:23:06] 2026-04-12 01:22:35,037 | INFO     | zombie collector waiting for pid 29448
[2026-04-12 03:23:06] 2026-04-12 01:22:35,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 03:23:06] 2026-04-12 01:22:35,037 | INFO     | collected zombie processes
[2026-04-12 03:23:06] 2026-04-12 01:22:35,037 | INFO     | will attempt to kill all subprocesses of pid=29448
[2026-04-12 03:23:06] 2026-04-12 01:22:35,122 | INFO     | process IDs to be killed: [29448] (in reverse order)
[2026-04-12 03:23:06] 2026-04-12 01:22:35,152 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 03:23:06] 2026-04-12 01:22:35,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 03:23:06] 2026-04-12 01:22:35,156 | INFO     | did not find any defunct processes belonging to 29448
[2026-04-12 03:23:06] 2026-04-12 01:22:35,158 | INFO     | did not find any defunct processes belonging to 29448
[2026-04-12 03:23:06] 2026-04-12 01:22:35,159 | INFO     | Ready for new job
[2026-04-12 03:23:06] 2026-04-12 01:22:35,159 | INFO     | **************************************
[2026-04-12 03:23:06] 2026-04-12 01:22:35,159 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 03:23:06] 2026-04-12 01:22:35,159 | INFO     | **************************************
[2026-04-12 03:23:06] 2026-04-12 01:22:35,159 | INFO     | 
[2026-04-12 03:23:06] 2026-04-12 01:22:35,172 | INFO     | architecture information:
[2026-04-12 03:23:06] 2026-04-12 01:22:35,173 | INFO     | executing command: cat /etc/os-release
[2026-04-12 03:23:06] 2026-04-12 01:22:35,178 | INFO     | cat /etc/os-release:
[2026-04-12 03:23:06] NAME="CentOS Linux"
[2026-04-12 03:23:06] VERSION="7 (Core)"
[2026-04-12 03:23:06] ID="centos"
[2026-04-12 03:23:06] ID_LIKE="rhel fedora"
[2026-04-12 03:23:06] VERSION_ID="7"
[2026-04-12 03:23:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 03:23:06] ANSI_COLOR="0;31"
[2026-04-12 03:23:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 03:23:06] HOME_URL="https://www.centos.org/"
[2026-04-12 03:23:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 03:23:06] 
[2026-04-12 03:23:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 03:23:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 03:23:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 03:23:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 03:23:06] 
[2026-04-12 03:23:06] 2026-04-12 01:22:35,179 | INFO     | **************************************
[2026-04-12 03:23:06] 2026-04-12 01:22:35,681 | INFO     | executing command: df -mP /tmp/job_11492084/atlas/pilot/slots/0
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | INFO     | sufficient remaining disk space (226957983744 B)
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | INFO     | update_server=False
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 03:23:06] 2026-04-12 01:22:35,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 03:23:06] 2026-04-12 01:22:35,922 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-12 03:23:06] 2026-04-12 01:22:35,922 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-12 03:23:06] 2026-04-12 01:22:35,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 03:23:06] 2026-04-12 01:22:35,922 | INFO     | will abort loop
[2026-04-12 03:23:06] 2026-04-12 01:22:35,998 | INFO     | all data control threads have been joined
[2026-04-12 03:23:06] 2026-04-12 01:22:36,463 | INFO     | all job control threads have been joined
[2026-04-12 03:23:06] 2026-04-12 01:22:36,534 | INFO     | all payload control threads have been joined
[2026-04-12 03:23:06] 2026-04-12 01:22:36,693 | INFO     | [job] retrieve thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:36,693 | INFO     | [job] queue monitor thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:36,927 | INFO     | [job] job monitor thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:36,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 03:23:06] 2026-04-12 01:22:36,984 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,003 | INFO     | [data] control thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,429 | INFO     | [job] validate thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,468 | INFO     | [job] control thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,539 | INFO     | [payload] control thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,636 | INFO     | [payload] validate_post thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,694 | INFO     | [data] copytool_out thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,706 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:37,815 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:38,032 | INFO     | [data] copytool_in thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:38,261 | INFO     | [payload] failed_post thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:22:40,989 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 03:23:06] 2026-04-12 01:23:01,145 | INFO     | [monitor] cgroup control has ended
[2026-04-12 03:23:06] 2026-04-12 01:23:01,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | INFO     | PID=23812 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 03:23:06] 2026-04-12 01:23:05,371 | INFO     | [monitor] control thread has ended
[2026-04-12 03:23:06] 2026-04-12 01:23:06,702 | INFO     | all workflow threads have been joined
[2026-04-12 03:23:06] 2026-04-12 01:23:06,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 03:23:06] 2026-04-12 01:23:06,703 | INFO     | traces error code: 0
[2026-04-12 03:23:06] 2026-04-12 01:23:06,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 03:23:06] 2026-04-12 01:23:06,757 [wrapper] ==== pilot stdout END ====
[2026-04-12 03:23:06] 2026-04-12 01:23:06,758 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 03:23:06] 2026-04-12 01:23:06,759 [wrapper] pilotpid: 23812
[2026-04-12 03:23:06] 2026-04-12 01:23:06,760 [wrapper] Pilot exit status: 0
[2026-04-12 03:23:06] 2026-04-12 01:23:06,764 [wrapper] pandaids: 7087159281
[2026-04-12 03:23:06] 2026-04-12 01:23:06,791 [wrapper] cleanup supervisor_pilot 12640 23813
[2026-04-12 03:23:06] 2026-04-12 01:23:06,792 [wrapper] Test setup, not cleaning
[2026-04-12 03:23:06] 2026-04-12 01:23:06,793 [wrapper] apfmon messages muted
[2026-04-12 03:23:06] 2026-04-12 01:23:06,794 [wrapper] ==== wrapper stdout END ====
[2026-04-12 03:23:06] 2026-04-12 01:23:06,795 [wrapper] ==== wrapper stderr END ====
[2026-04-12 03:23:06]  *** Error codes and diagnostics ***
[2026-04-12 03:23:06]     "exeErrorCode": 0,
[2026-04-12 03:23:06]     "pilotErrorCode": 0,
[2026-04-12 03:23:06]  *** Listing of results directory ***
[2026-04-12 03:23:06] total 415840
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    644190 Apr 11 20:42 pilot3.tar.gz
[2026-04-12 03:23:06] -rwx------ 1 mf493845 unix-user     36322 Apr 11 20:45 runpilot2-wrapper.sh
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      5094 Apr 11 20:50 queuedata.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       100 Apr 12 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 03:23:06] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 12 01:39 run_atlas
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       105 Apr 12 01:39 job.xml
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user 225298166 Apr 12 02:36 EVNT.49263206._000959.pool.root.1
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 12 02:36 start_atlas.sh
[2026-04-12 03:23:06] drwxrwx--x 2 mf493845 unix-user       100 Apr 12 02:36 shared
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user    656927 Apr 12 02:36 input.tar.gz
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      6306 Apr 12 02:36 init_data.xml
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user         0 Apr 12 02:36 boinc_setup_complete
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      8192 Apr 12 02:36 boinc_mmap_file
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user         0 Apr 12 02:36 boinc_lockfile
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      2575 Apr 12 02:36 pandaJob.out
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    997751 Apr 12 02:36 agis_schedconf.cvmfs.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user   1511579 Apr 12 02:36 agis_ddmendpoints.agis.ALL.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       416 Apr 12 02:36 workernode_map.json
[2026-04-12 03:23:06] drwx------ 5 mf493845 unix-user       480 Apr 12 02:36 pilot3
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user 195312900 Apr 12 03:22 HITS.49263208._037431.pool.root.1
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      1014 Apr 12 03:22 memory_monitor_summary.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    284464 Apr 12 03:22 log.49263208._037431.job.log.tgz.1
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user        95 Apr 12 03:22 pilot_heartbeat.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      6325 Apr 12 03:22 heartbeat_new.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      6215 Apr 12 03:22 heartbeat.json
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      4941 Apr 12 03:23 pilotlog.txt
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    305408 Apr 12 03:23 log.49263208._037431.job.log.1
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       357 Apr 12 03:23 output.list
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       410 Apr 12 03:23 runtime_log
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    604160 Apr 12 03:23 result.tar.gz
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user      8841 Apr 12 03:23 runtime_log.err
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user       641 Apr 12 03:23 96d94c9b7ddc.diag
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user     21928 Apr 12 03:23 stderr.txt
[2026-04-12 03:23:06] HITS file was successfully produced:
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user 195312900 Apr 12 03:22 shared/HITS.pool.root.1
[2026-04-12 03:23:06]  *** Contents of shared directory: ***
[2026-04-12 03:23:06] total 412008
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user 225298166 Apr 12 02:36 ATLAS.root_0
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 12 02:36 start_atlas.sh
[2026-04-12 03:23:06] -rw-r--r-- 2 mf493845 unix-user    656927 Apr 12 02:36 input.tar.gz
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user 195312900 Apr 12 03:22 HITS.pool.root.1
[2026-04-12 03:23:06] -rw------- 1 mf493845 unix-user    604160 Apr 12 03:23 result.tar.gz
03:23:08 (19184): run_atlas exited; CPU time 19957.166279
03:23:08 (19184): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN