Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-12 16:57:07 (17824): vboxwrapper version 26210
2026-04-12 16:57:07 (17824): BOINC client version: 8.2.9
2026-04-12 16:57:08 (17824): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-12 16:57:08 (17824): Successfully copied 'init_data.xml' to the shared directory.
2026-04-12 16:57:09 (17824): Create VM. (boinc_a91a8a9d8bd2616f, slot#0)
2026-04-12 16:57:09 (17824): Setting Memory Size for VM. (4600MB)
2026-04-12 16:57:09 (17824): Setting CPU Count for VM. (6)
2026-04-12 16:57:10 (17824): Setting Chipset Options for VM.
2026-04-12 16:57:10 (17824): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-12 16:57:10 (17824): Setting Boot Options for VM.
2026-04-12 16:57:11 (17824): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-12 16:57:11 (17824): Enabling VM Network Access.
2026-04-12 16:57:11 (17824): Disabling USB Support for VM.
2026-04-12 16:57:12 (17824): Disabling COM Port Support for VM.
2026-04-12 16:57:12 (17824): Disabling LPT Port Support for VM.
2026-04-12 16:57:12 (17824): Disabling Audio Support for VM.
2026-04-12 16:57:12 (17824): Disabling Clipboard Support for VM.
2026-04-12 16:57:13 (17824): Disabling Drag and Drop Support for VM.
2026-04-12 16:57:13 (17824): Adding storage controller(s) to VM.
2026-04-12 16:57:13 (17824): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-12 16:57:15 (17824): Adding VirtualBox Guest Additions to VM.
2026-04-12 16:57:16 (17824): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-12 16:57:16 (17824): forwarding host port 61912 to guest port 80
2026-04-12 16:57:16 (17824): Enabling remote desktop for VM.
2026-04-12 16:57:16 (17824): Required extension pack not installed, remote desktop not enabled.
2026-04-12 16:57:16 (17824): Enabling shared directory for VM.
2026-04-12 16:57:17 (17824): Starting VM using VBoxManage interface. (boinc_a91a8a9d8bd2616f, slot#0)
2026-04-12 16:57:23 (17824): Successfully started VM. (PID = '15088')
2026-04-12 16:57:23 (17824): Reporting VM Process ID to BOINC.
2026-04-12 16:57:23 (17824): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-12 16:57:23 (17824): Guest Log: CPUID EDX: 0x178bfbff
2026-04-12 16:57:23 (17824): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-12 16:57:23 (17824): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-12 16:57:23 (17824): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-12 16:57:23 (17824): Detected: Web Application Enabled (http://localhost:61912)
2026-04-12 16:57:23 (17824): Preference change detected
2026-04-12 16:57:23 (17824): Setting CPU throttle for VM. (50%)
2026-04-12 16:57:23 (17824): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-12 16:57:25 (17824): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-12 16:57:25 (17824): Guest Log: BIOS: Booting from Hard Disk...
2026-04-12 16:57:30 (17824): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-12 16:57:30 (17824): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-12 16:57:30 (17824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-12 16:57:39 (17824): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-12 16:57:39 (17824): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-12 16:57:55 (17824): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.000096 main     Log opened 2026-04-12T16:57:52.946053000Z
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003803 main     OS Product: Linux
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003875 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003895 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003911 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003911 main     Process ID: 1339
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.003912 main     Package type: LINUX_64BITS_GENERIC
2026-04-12 16:57:55 (17824): Guest Log: 00:00:00.004396 main     5.2.32 r132073 started. Verbose level = 0
2026-04-12 16:57:55 (17824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-12 16:57:55 (17824): Guest Log: [INFO] Mounting shared directory
2026-04-12 16:57:55 (17824): Guest Log: [INFO] Checking for init_data.xml
2026-04-12 16:57:59 (17824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-12 16:57:59 (17824): Guest Log: [INFO] Detected branch: prod
2026-04-12 16:57:59 (17824): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-12 16:57:59 (17824): Guest Log: Copying input files
2026-04-12 16:58:01 (17824): Guest Log: Copied input files into RunAtlas.
2026-04-12 16:58:01 (17824): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-12 16:58:01 (17824): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-12 16:58:01 (17824): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-12 16:58:01 (17824): Guest Log: Further information can be found at the LHC@home message board.
2026-04-12 16:58:05 (17824): Guest Log: 00:00:10.014579 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 590 555 980 000ns (GuestNow=1 776 009 482 402 762 000 ns GuestLast=1 776 013 072 958 742 000 ns fSetTimeLastLoop=true )
2026-04-12 16:58:11 (17824): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-12 16:58:11 (17824): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-12 16:58:11 (17824): Guest Log: 2.6.3.0 1615 0 32164 158384 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-12 16:58:14 (17824): Guest Log: copied the webapp to /var/www
2026-04-12 16:58:15 (17824): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-12 16:58:15 (17824): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-12 16:58:15 (17824): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-12 16:58:15 (17824): Guest Log:  *** Starting ATLAS job. (PandaID=7087254526 taskID=49263191) ***
2026-04-12 18:37:25 (17824): Status Report: Elapsed Time: '6000.000000'
2026-04-12 18:37:25 (17824): Status Report: CPU Time: '20251.421875'
2026-04-12 19:37:44 (17824): Guest Log:  *** Job finished ***
2026-04-12 19:37:44 (17824): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:12,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:12,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:35,555 | INFO     | [monitor] cgroup control has ended
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:36,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355235612480)>', '<ExcThread(monitor, started 140354363848448)>']
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:36,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:36,962 | INFO     | [monitor] control thread has ended
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,112 | INFO     | all workflow threads have been joined
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,112 | INFO     | end of generic workflow (traces error code: 0)
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,113 | INFO     | traces error code: 0
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,746 [wrapper] ==== pilot stdout END ====
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,748 [wrapper] ==== wrapper stdout RESUME ====
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,751 [wrapper] pilotpid: 6029
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,754 [wrapper] Pilot exit status: 0
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,827 [wrapper] pandaids: 7087254526
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,846 [wrapper] cleanup supervisor_pilot 26675 6030
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,849 [wrapper] Test setup, not cleaning
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,854 [wrapper] apfmon messages muted
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,856 [wrapper] ==== wrapper stdout END ====
2026-04-12 19:37:44 (17824): Guest Log: 2026-04-12 18:37:42,859 [wrapper] ==== wrapper stderr END ====
2026-04-12 19:37:44 (17824): Guest Log:  *** Error codes and diagnostics ***
2026-04-12 19:37:44 (17824): Guest Log:     "exeErrorCode": 0,
2026-04-12 19:37:44 (17824): Guest Log:     "pilotErrorCode": 0,
2026-04-12 19:37:44 (17824): Guest Log:  *** Listing of results directory ***
2026-04-12 19:37:44 (17824): Guest Log: total 194932
2026-04-12 19:37:44 (17824): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 11 19:47 pilot3.tar.gz
2026-04-12 19:37:44 (17824): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 11 20:26 runpilot2-wrapper.sh
2026-04-12 19:37:44 (17824): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 11 20:30 queuedata.json
2026-04-12 19:37:44 (17824): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 12 15:57 start_atlas.sh
2026-04-12 19:37:44 (17824): Guest Log: -rwxr-xr-x. 1 atlas atlas    656927 Apr 12 15:57 input.tar.gz
2026-04-12 19:37:44 (17824): Guest Log: -rwxr-xr-x. 1 atlas atlas      8496 Apr 12 15:57 init_data.xml
2026-04-12 19:37:44 (17824): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 15:57 EVNT.49263189._001236.pool.root.1 -> /data/./ATLAS.root_0
2026-04-12 19:37:44 (17824): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 12 15:58 pandaJob.out
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas    997759 Apr 12 15:59 agis_schedconf.cvmfs.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 12 15:59 agis_ddmendpoints.agis.ALL.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas       434 Apr 12 15:59 workernode_map.json
2026-04-12 19:37:44 (17824): Guest Log: drwx------. 5 atlas atlas      4096 Apr 12 15:59 pilot3
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas 193295476 Apr 12 18:36 HITS.49263191._051504.pool.root.1
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 12 18:36 memory_monitor_summary.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas    319385 Apr 12 18:36 log.49263191._051504.job.log.tgz.1
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas      6401 Apr 12 18:36 heartbeat_new.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas      6292 Apr 12 18:36 heartbeat.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas        95 Apr 12 18:37 pilot_heartbeat.json
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas      4872 Apr 12 18:37 pilotlog.txt
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas    845619 Apr 12 18:37 log.49263191._051504.job.log.1
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas       357 Apr 12 18:37 output.list
2026-04-12 19:37:44 (17824): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 12 18:37 runtime_log
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas   1177600 Apr 12 18:37 result.tar.gz
2026-04-12 19:37:44 (17824): Guest Log: -rw-r--r--. 1 atlas atlas      8382 Apr 12 18:37 runtime_log.err
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas       659 Apr 12 18:37 ae91adc1c47f.diag
2026-04-12 19:37:44 (17824): Guest Log: Looking for outputfile HITS.49263191._051504.pool.root.1
2026-04-12 19:37:44 (17824): Guest Log: HITS file was successfully produced
2026-04-12 19:37:44 (17824): Guest Log: -rw-------. 1 atlas atlas 193295476 Apr 12 18:36 /home/atlas/RunAtlas/HITS.49263191._051504.pool.root.1
2026-04-12 19:37:45 (17824): Guest Log: Successfully finished the ATLAS job!
2026-04-12 19:37:45 (17824): Guest Log: Copying the results back to the shared directory!
2026-04-12 19:37:45 (17824): Guest Log:  *** Contents of shared directory: ***
2026-04-12 19:37:45 (17824): Guest Log: total 409900
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root 224570905 Apr 12 15:57 ATLAS.root_0
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root 193295476 Apr 12 18:37 HITS.pool.root.1
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root      8496 Apr 12 15:57 init_data.xml
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root    656927 Apr 11 22:26 input.tar.gz
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root   1177600 Apr 12  2026 result.tar.gz
2026-04-12 19:37:45 (17824): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 11 22:26 start_atlas.sh
2026-04-12 19:37:45 (17824): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-12 19:37:45 (17824): VM Completion File Detected.
2026-04-12 19:37:45 (17824): Powering off VM.
2026-04-12 19:37:45 (17824): Successfully stopped VM.
2026-04-12 19:37:45 (17824): Deregistering VM. (boinc_a91a8a9d8bd2616f, slot#0)
2026-04-12 19:37:45 (17824): Removing network bandwidth throttle group from VM.
2026-04-12 19:37:46 (17824): Removing VM from VirtualBox.
2026-04-12 19:37:51 (17824): called boinc_finish(0)

</stderr_txt>
]]>

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