Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:37:21 (29344): wrapper (7.7.26015): starting
12:37:21 (29344): wrapper: running run_atlas (--nthreads 8)
[2026-04-12 12:37:21] Arguments: --nthreads 8
[2026-04-12 12:37:21] Threads: 8
[2026-04-12 12:37:21] Checking for CVMFS
[2026-04-12 12:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 12:37:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 12:37:25] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 12:37:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 12:37:26] 2.11.2.0 8257 15658 86532 158376 0 53 19359987 25165825 96 130560 0 5086950 99.840 3164656 8406 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-12 12:37:26] CVMFS is ok
[2026-04-12 12:37:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 12:37:26] Checking for apptainer binary...
[2026-04-12 12:37:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 12:37:26] Running /usr/bin/apptainer --version
[2026-04-12 12:37:26] apptainer version 1.3.2-1.el7
[2026-04-12 12:37:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 12:37:56] cg-vwn409.simple-grid.lan
[2026-04-12 12:37:56] apptainer works
[2026-04-12 12:37:56] Set ATHENA_PROC_NUMBER=8
[2026-04-12 12:37:56] Set ATHENA_CORE_NUMBER=8
[2026-04-12 12:37:56] Starting ATLAS job with PandaID=7087113472
[2026-04-12 12:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 16:58:59]  *** The last 200 lines of the pilot log: ***
[2026-04-12 16:58:59] 2026-04-12 14:58:20,375 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 16:58:59] 2026-04-12 14:58:20,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 16:58:59] 2026-04-12 14:58:20,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 16:58:59] 2026-04-12 14:58:20,388 | INFO     | fitting pss+swap vs Time
[2026-04-12 16:58:59] 2026-04-12 14:58:20,388 | INFO     | sum of square deviations: 4560048290.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,391 | INFO     | sum of deviations: 165361393781.00003
[2026-04-12 16:58:59] 2026-04-12 14:58:20,391 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,391 | INFO     | mean y: 2389880.4653061223
[2026-04-12 16:58:59] 2026-04-12 14:58:20,391 | INFO     | intersect: 2389880.4653061223
[2026-04-12 16:58:59] 2026-04-12 14:58:20,392 | INFO     | chi2: 9.284841176397613
[2026-04-12 16:58:59] 2026-04-12 14:58:20,392 | INFO     | sum of square deviations: 4286517580.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,394 | INFO     | sum of deviations: 177666632841.5
[2026-04-12 16:58:59] 2026-04-12 14:58:20,394 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,395 | INFO     | mean y: 2396591.370833333
[2026-04-12 16:58:59] 2026-04-12 14:58:20,395 | INFO     | intersect: 2396591.370833333
[2026-04-12 16:58:59] 2026-04-12 14:58:20,395 | INFO     | chi2: 8.584894717972404
[2026-04-12 16:58:59] 2026-04-12 14:58:20,395 | INFO     | current chi2=8.584894717972404 (change=7.538593769428147 %)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,396 | INFO     | right removable region: 239
[2026-04-12 16:58:59] 2026-04-12 14:58:20,396 | INFO     | sum of square deviations: 4286517580.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,398 | INFO     | sum of deviations: 79289617220.49998
[2026-04-12 16:58:59] 2026-04-12 14:58:20,398 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,399 | INFO     | mean y: 2437848.6958333333
[2026-04-12 16:58:59] 2026-04-12 14:58:20,399 | INFO     | intersect: 2437848.6958333333
[2026-04-12 16:58:59] 2026-04-12 14:58:20,399 | INFO     | chi2: 3.9617850066378377
[2026-04-12 16:58:59] 2026-04-12 14:58:20,399 | INFO     | current chi2=3.9617850066378377 (change=57.33061092408525 %)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,400 | INFO     | sum of square deviations: 4024149870.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,402 | INFO     | sum of deviations: 12955691911.99999
[2026-04-12 16:58:59] 2026-04-12 14:58:20,402 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,402 | INFO     | mean y: 2476359.025531915
[2026-04-12 16:58:59] 2026-04-12 14:58:20,402 | INFO     | intersect: 2476359.025531915
[2026-04-12 16:58:59] 2026-04-12 14:58:20,411 | INFO     | chi2: 1.0740279449003625
[2026-04-12 16:58:59] 2026-04-12 14:58:20,411 | INFO     | current chi2=1.0740279449003625 (change=72.89030214661157 %)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,412 | INFO     | sum of square deviations: 3772712597.5
[2026-04-12 16:58:59] 2026-04-12 14:58:20,414 | INFO     | sum of deviations: -2639234357.000002
[2026-04-12 16:58:59] 2026-04-12 14:58:20,414 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,414 | INFO     | mean y: 2485721.269565217
[2026-04-12 16:58:59] 2026-04-12 14:58:20,414 | INFO     | intersect: 2485721.269565217
[2026-04-12 16:58:59] 2026-04-12 14:58:20,415 | INFO     | chi2: 0.7969374724813025
[2026-04-12 16:58:59] 2026-04-12 14:58:20,415 | INFO     | current chi2=0.7969374724813025 (change=25.799186486229235 %)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,415 | INFO     | sum of square deviations: 3531973200.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,417 | INFO     | sum of deviations: -5335816278.000002
[2026-04-12 16:58:59] 2026-04-12 14:58:20,418 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,418 | INFO     | mean y: 2487427.8355555558
[2026-04-12 16:58:59] 2026-04-12 14:58:20,418 | INFO     | intersect: 2487427.8355555558
[2026-04-12 16:58:59] 2026-04-12 14:58:20,418 | INFO     | chi2: 0.7931569853588892
[2026-04-12 16:58:59] 2026-04-12 14:58:20,418 | INFO     | current chi2=0.7931569853588892 (change=0.4743768806155613 %)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,419 | INFO     | left removable region: 20
[2026-04-12 16:58:59] 2026-04-12 14:58:20,419 | INFO     | sum of square deviations: 3256879670.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,421 | INFO     | sum of deviations: 9249365584.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,421 | INFO     | mean x (centered): 0.0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,421 | INFO     | mean y: 2496908.187214612
[2026-04-12 16:58:59] 2026-04-12 14:58:20,421 | INFO     | intersect: 2496908.187214612
[2026-04-12 16:58:59] 2026-04-12 14:58:20,422 | INFO     | chi2: 0.002083365443434021
[2026-04-12 16:58:59] 2026-04-12 14:58:20,422 | INFO     | current memory leak: 2.84 B/s (using 219 data points, chi2=0.00)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | ..............................
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | . Timing measurements:
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | . get job = 0 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | . initial setup = 116 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | . payload setup = 195 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,423 | INFO     | . stage-in = 0 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,424 | INFO     | . payload execution = 15037 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,424 | INFO     | . stage-out = 4 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,424 | INFO     | . log creation = 1 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,424 | INFO     | ..............................
[2026-04-12 16:58:59] 2026-04-12 14:58:20,795 | INFO     | 
[2026-04-12 16:58:59] 2026-04-12 14:58:20,795 | INFO     | job summary report
[2026-04-12 16:58:59] 2026-04-12 14:58:20,795 | INFO     | --------------------------------------------------
[2026-04-12 16:58:59] 2026-04-12 14:58:20,795 | INFO     | PanDA job id: 7087113472
[2026-04-12 16:58:59] 2026-04-12 14:58:20,795 | INFO     | task id: 49263208
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | errors: (none)
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | pilot state: finished 
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | transexitcode: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | exeerrorcode: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | exeerrordiag: 
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | exitcode: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | exitmsg: OK
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | cpuconsumptiontime: 56012 s
[2026-04-12 16:58:59] 2026-04-12 14:58:20,796 | INFO     | nevents: 400
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | neventsw: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | pid: 5358
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | pgrp: 5358
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | corecount: 8
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | event service: False
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | sizes: {0: 2279667, 1: 2279922, 2: 2281496, 12: 2281524, 15236: 2312627, 15243: 2321947}
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | --------------------------------------------------
[2026-04-12 16:58:59] 2026-04-12 14:58:20,797 | INFO     | 
[2026-04-12 16:58:59] 2026-04-12 14:58:20,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-12 16:58:59] 2026-04-12 14:58:21,391 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,394 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 16:58:59] 2026-04-12 14:58:21,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,394 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 16:58:59] 2026-04-12 14:58:21,394 | INFO     | job 7087113472 has completed (purged errors)
[2026-04-12 16:58:59] 2026-04-12 14:58:21,394 | INFO     | overall cleanup function is called
[2026-04-12 16:58:59] 2026-04-12 14:58:22,406 | INFO     | --- collectZombieJob: --- 10, [5358]
[2026-04-12 16:58:59] 2026-04-12 14:58:22,406 | INFO     | zombie collector waiting for pid 5358
[2026-04-12 16:58:59] 2026-04-12 14:58:22,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 16:58:59] 2026-04-12 14:58:22,406 | INFO     | collected zombie processes
[2026-04-12 16:58:59] 2026-04-12 14:58:22,407 | INFO     | will attempt to kill all subprocesses of pid=5358
[2026-04-12 16:58:59] 2026-04-12 14:58:22,482 | INFO     | process IDs to be killed: [5358] (in reverse order)
[2026-04-12 16:58:59] 2026-04-12 14:58:23,432 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 16:58:59] 2026-04-12 14:58:23,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 16:58:59] 2026-04-12 14:58:23,434 | INFO     | did not find any defunct processes belonging to 5358
[2026-04-12 16:58:59] 2026-04-12 14:58:23,435 | INFO     | did not find any defunct processes belonging to 5358
[2026-04-12 16:58:59] 2026-04-12 14:58:23,436 | INFO     | Ready for new job
[2026-04-12 16:58:59] 2026-04-12 14:58:23,437 | INFO     | **************************************
[2026-04-12 16:58:59] 2026-04-12 14:58:23,438 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 16:58:59] 2026-04-12 14:58:23,438 | INFO     | **************************************
[2026-04-12 16:58:59] 2026-04-12 14:58:23,438 | INFO     | 
[2026-04-12 16:58:59] 2026-04-12 14:58:23,438 | INFO     | pilot is running in a VM
[2026-04-12 16:58:59] 2026-04-12 14:58:23,438 | INFO     | architecture information:
[2026-04-12 16:58:59] 2026-04-12 14:58:23,445 | INFO     | executing command: cat /etc/os-release
[2026-04-12 16:58:59] 2026-04-12 14:58:23,785 | INFO     | cat /etc/os-release:
[2026-04-12 16:58:59] NAME="CentOS Linux"
[2026-04-12 16:58:59] VERSION="7 (Core)"
[2026-04-12 16:58:59] ID="centos"
[2026-04-12 16:58:59] ID_LIKE="rhel fedora"
[2026-04-12 16:58:59] VERSION_ID="7"
[2026-04-12 16:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 16:58:59] ANSI_COLOR="0;31"
[2026-04-12 16:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 16:58:59] HOME_URL="https://www.centos.org/"
[2026-04-12 16:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 16:58:59] 
[2026-04-12 16:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 16:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 16:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 16:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 16:58:59] 
[2026-04-12 16:58:59] 2026-04-12 14:58:23,786 | INFO     | **************************************
[2026-04-12 16:58:59] 2026-04-12 14:58:24,289 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-12 16:58:59] 2026-04-12 14:58:24,547 | INFO     | sufficient remaining disk space (495872638976 B)
[2026-04-12 16:58:59] 2026-04-12 14:58:24,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 16:58:59] 2026-04-12 14:58:24,548 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 16:58:59] 2026-04-12 14:58:24,548 | INFO     | update_server=False
[2026-04-12 16:58:59] 2026-04-12 14:58:24,548 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 16:58:59] 2026-04-12 14:58:24,706 | INFO     | all data control threads have been joined
[2026-04-12 16:58:59] 2026-04-12 14:58:24,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 16:58:59] 2026-04-12 14:58:24,900 | INFO     | aborting loop
[2026-04-12 16:58:59] 2026-04-12 14:58:25,017 | INFO     | all payload control threads have been joined
[2026-04-12 16:58:59] 2026-04-12 14:58:25,556 | INFO     | [job] retrieve thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 16:58:59] 2026-04-12 14:58:25,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,613 | INFO     | [job] validate thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,630 | INFO     | all job control threads have been joined
[2026-04-12 16:58:59] 2026-04-12 14:58:25,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 16:58:59] 2026-04-12 14:58:25,712 | INFO     | [data] control thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,786 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,819 | INFO     | [payload] failed_post thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,871 | INFO     | [payload] validate_post thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,906 | INFO     | [job] job monitor thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:25,996 | INFO     | [data] copytool_in thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:26,022 | INFO     | [payload] control thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:26,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 16:58:59] 2026-04-12 14:58:26,559 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:26,594 | INFO     | [job] queue monitor thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:26,636 | INFO     | [job] control thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:26,964 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:27,663 | INFO     | [data] copytool_out thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:29,742 | INFO     | [monitor] cgroup control has ended
[2026-04-12 16:58:59] 2026-04-12 14:58:30,359 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 16:58:59] 2026-04-12 14:58:30,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765519591232)>', '<ExcThread(monitor, started 139764795692800)>']
[2026-04-12 16:58:59] 2026-04-12 14:58:35,775 | INFO     | all workflow threads have been joined
[2026-04-12 16:58:59] 2026-04-12 14:58:35,775 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 16:58:59] 2026-04-12 14:58:35,775 | INFO     | traces error code: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:35,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 16:58:59] 2026-04-12 14:58:54,121 | INFO     | PID=899 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-04-12 16:58:59] 2026-04-12 14:58:54,121 | INFO     | .. there are 2 such processes running
[2026-04-12 16:58:59] 2026-04-12 14:58:54,121 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 16:58:59] 2026-04-12 14:58:54,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 16:58:59] 2026-04-12 14:58:54,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 16:58:59] 2026-04-12 14:58:54,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 16:58:59] 2026-04-12 14:58:54,122 | INFO     | [monitor] control thread has ended
[2026-04-12 16:58:59] 2026-04-12 14:58:54,612 [wrapper] ==== pilot stdout END ====
[2026-04-12 16:58:59] 2026-04-12 14:58:54,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 16:58:59] 2026-04-12 14:58:54,732 [wrapper] pilotpid: 899
[2026-04-12 16:58:59] 2026-04-12 14:58:54,797 [wrapper] Pilot exit status: 0
[2026-04-12 16:58:59] 2026-04-12 14:58:55,197 [wrapper] pandaids: 7087113472
[2026-04-12 16:58:59] 2026-04-12 14:58:56,259 [wrapper] cleanup supervisor_pilot 11755 900
[2026-04-12 16:58:59] 2026-04-12 14:58:56,320 [wrapper] Test setup, not cleaning
[2026-04-12 16:58:59] 2026-04-12 14:58:56,420 [wrapper] apfmon messages muted
[2026-04-12 16:58:59] 2026-04-12 14:58:56,520 [wrapper] ==== wrapper stdout END ====
[2026-04-12 16:58:59] 2026-04-12 14:58:56,637 [wrapper] ==== wrapper stderr END ====
[2026-04-12 16:58:59]  *** Error codes and diagnostics ***
[2026-04-12 16:58:59]     "exeErrorCode": 0,
[2026-04-12 16:58:59]     "pilotErrorCode": 0,
[2026-04-12 16:58:59]  *** Listing of results directory ***
[2026-04-12 16:58:59] total 415288
[2026-04-12 16:58:59] -rwx------. 1 boinc boinc     36322 Apr 11 19:02 runpilot2-wrapper.sh
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc    644190 Apr 11 19:03 pilot3.tar.gz
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc      5094 Apr 11 19:06 queuedata.json
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc       100 Apr 12 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 16:58:59] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 12:37 run_atlas
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc       105 Apr 12 12:37 job.xml
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc 224768880 Apr 12 12:37 EVNT.49263206._000941.pool.root.1
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc     15665 Apr 12 12:37 start_atlas.sh
[2026-04-12 16:58:59] drwxrwx--x. 2 boinc boinc        68 Apr 12 12:37 shared
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc    656933 Apr 12 12:37 input.tar.gz
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc      6308 Apr 12 12:37 init_data.xml
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc         0 Apr 12 12:37 boinc_lockfile
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc      2575 Apr 12 12:37 pandaJob.out
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc       415 Apr 12 12:43 workernode_map.json
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc    997759 Apr 12 12:44 agis_schedconf.cvmfs.json
[2026-04-12 16:58:59] drwx------. 5 boinc boinc      4096 Apr 12 12:44 pilot3
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc 192823079 Apr 12 16:56 HITS.49263208._036935.pool.root.1
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc       489 Apr 12 16:57 boinc_task_state.xml
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc      1015 Apr 12 16:58 memory_monitor_summary.json
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc        95 Apr 12 16:58 pilot_heartbeat.json
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc   1511579 Apr 12 16:58 agis_ddmendpoints.agis.ALL.json
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc    394132 Apr 12 16:58 log.49263208._036935.job.log.tgz.1
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc      6335 Apr 12 16:58 heartbeat_new.json
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc      6226 Apr 12 16:58 heartbeat.json
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc      8192 Apr 12 16:58 boinc_mmap_file
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc        28 Apr 12 16:58 wrapper_checkpoint.txt
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc       818 Apr 12 16:58 pilotlog.txt
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc   1416768 Apr 12 16:58 log.49263208._036935.job.log.1
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc       357 Apr 12 16:58 output.list
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc       410 Apr 12 16:58 runtime_log
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc   1832960 Apr 12 16:58 result.tar.gz
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc      8438 Apr 12 16:58 runtime_log.err
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc       655 Apr 12 16:58 7ebc43763b9f.diag
[2026-04-12 16:58:59] -rw-r--r--. 1 boinc boinc     20273 Apr 12 16:58 stderr.txt
[2026-04-12 16:58:59] HITS file was successfully produced:
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc 192823079 Apr 12 16:56 shared/HITS.pool.root.1
[2026-04-12 16:58:59]  *** Contents of shared directory: ***
[2026-04-12 16:58:59] total 410260
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc 224768880 Apr 12 12:37 ATLAS.root_0
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc     15665 Apr 12 12:37 start_atlas.sh
[2026-04-12 16:58:59] -rw-r--r--. 2 boinc boinc    656933 Apr 12 12:37 input.tar.gz
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc 192823079 Apr 12 16:56 HITS.pool.root.1
[2026-04-12 16:58:59] -rw-------. 1 boinc boinc   1832960 Apr 12 16:58 result.tar.gz
16:59:00 (29344): run_atlas exited; CPU time 56168.967495
16:59:00 (29344): called boinc_finish(0)

</stderr_txt>
]]>

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