Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:47 (3872394): wrapper (7.7.26015): starting
16:12:47 (3872394): wrapper: running run_atlas (--nthreads 12)
[2026-04-12 16:12:47] Arguments: --nthreads 12
[2026-04-12 16:12:47] Threads: 12
[2026-04-12 16:12:47] Checking for CVMFS
[2026-04-12 16:12:47] No cvmfs_config command found, will try listing directly
[2026-04-12 16:12:47] CVMFS is ok
[2026-04-12 16:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 16:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 16:12:47] Further information can be found at the LHC@home message board.
[2026-04-12 16:12:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 16:12:47] Checking for apptainer binary...
[2026-04-12 16:12:47] which: no apptainer in ((null))
[2026-04-12 16:12:47] apptainer is not installed, using version from CVMFS
[2026-04-12 16:12:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 16:12:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-04-12 16:12:47] apptainer works
[2026-04-12 16:12:47] Set ATHENA_PROC_NUMBER=12
[2026-04-12 16:12:47] Set ATHENA_CORE_NUMBER=12
[2026-04-12 16:12:47] Starting ATLAS job with PandaID=7087054834
[2026-04-12 16:12:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 16:43:16]  *** The last 200 lines of the pilot log: ***
[2026-04-12 16:43:16]  filetype=log
[2026-04-12 16:43:16]  guid=8862e892-0241-4924-8d99-ea2b3682fa56
[2026-04-12 16:43:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-12 16:43:16]  is_altstaged=None
[2026-04-12 16:43:16]  is_tar=False
[2026-04-12 16:43:16]  lfn=log.49263208._036680.job.log.tgz.1
[2026-04-12 16:43:16]  mtime=0
[2026-04-12 16:43:16]  protocol_id=None
[2026-04-12 16:43:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-12 16:43:16]  replicas=None
[2026-04-12 16:43:16]  scope=mc23_13p6TeV
[2026-04-12 16:43:16]  status=None
[2026-04-12 16:43:16]  status_code=0
[2026-04-12 16:43:16]  storage_token=
[2026-04-12 16:43:16]  surl=/var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7087054834/log.49263208._036680.job.log.tgz.1
[2026-04-12 16:43:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/78/log.49263208._036680.job.log.tgz.1
[2026-04-12 16:43:16]  workdir=None
[2026-04-12 16:43:16] ]
[2026-04-12 16:43:16] 2026-04-12 14:42:28,275 | INFO     | transferring file log.49263208._036680.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7087054834/log.49263208._036680.job.log.tgz.1 to /var/lib/b
[2026-04-12 16:43:16] 2026-04-12 14:42:28,275 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7087054834/log.49263208._036680.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/1/lo
[2026-04-12 16:43:16] 2026-04-12 14:42:28,291 | INFO     | adding to output.list: log.49263208._036680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/78/log.49263208._036680.job.log.tg
[2026-04-12 16:43:16] 2026-04-12 14:42:28,291 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-12 16:43:16] 2026-04-12 14:42:28,291 | INFO     | summary of transferred files:
[2026-04-12 16:43:16] 2026-04-12 14:42:28,291 | INFO     |  -- lfn=log.49263208._036680.job.log.tgz.1, status_code=0, status=transferred
[2026-04-12 16:43:16] 2026-04-12 14:42:28,292 | INFO     | stage-out finished correctly
[2026-04-12 16:43:16] 2026-04-12 14:42:30,718 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 16:43:16] 2026-04-12 14:42:31,688 | INFO     | job 7087054834 has state=finished
[2026-04-12 16:43:16] 2026-04-12 14:42:31,688 | INFO     | preparing for final server update for job 7087054834 in state='finished'
[2026-04-12 16:43:16] 2026-04-12 14:42:31,688 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7087054834/jobReport.json
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/1/workernode_map.json
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | this job has now completed (state=finished)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | log transfer has been attempted: DONE
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | job 7087054834 has finished - writing final server update
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1039162/.job.ad'
[2026-04-12 16:43:16] 2026-04-12 14:42:31,690 | INFO     | total number of processed events: 400 (read)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,708 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7087054834/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,708 | INFO     | extracted standard info from prmon json
[2026-04-12 16:43:16] 2026-04-12 14:42:31,708 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 16:43:16] 2026-04-12 14:42:31,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 16:43:16] 2026-04-12 14:42:31,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | fitting pss+swap vs Time
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | sum of square deviations: 3294945.5
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | sum of deviations: 39101731.99999999
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | mean x (centered): 0.0
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | mean y: 2696544.090909091
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | intersect: 2696544.090909091
[2026-04-12 16:43:16] 2026-04-12 14:42:31,709 | INFO     | chi2: 5.3732884951152e-05
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | current memory leak: 11.87 B/s (using 22 data points, chi2=0.00)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | could have reported an average CPU frequency of 3585 MHz (4 samples)
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | ..............................
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . Timing measurements:
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . get job = 0 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . initial setup = 4 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . payload setup = 6 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . stage-in = 0 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . payload execution = 1747 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . stage-out = 0 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | . log creation = 0 s
[2026-04-12 16:43:16] 2026-04-12 14:42:31,710 | INFO     | ..............................
[2026-04-12 16:43:16] 2026-04-12 14:42:32,034 | INFO     | 
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | job summary report
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | --------------------------------------------------
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | PanDA job id: 7087054834
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | task id: 49263208
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | errors: (none)
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | pilot state: finished 
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | transexitcode: 0
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | exeerrorcode: 0
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | exeerrordiag: 
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | exitcode: 0
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | exitmsg: OK
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | cpuconsumptiontime: 18010 s
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | nevents: 400
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | neventsw: 0
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | pid: 3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | pgrp: 3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | corecount: 12
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | event service: False
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | sizes: {0: 2281479, 11: 2281479, 1757: 2306346, 1758: 2315366, 1760: 2315422, 1761: 2315616}
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | --------------------------------------------------
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | 
[2026-04-12 16:43:16] 2026-04-12 14:42:32,035 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | job 7087054834 has completed (purged errors)
[2026-04-12 16:43:16] 2026-04-12 14:42:32,052 | INFO     | overall cleanup function is called
[2026-04-12 16:43:16] 2026-04-12 14:42:33,059 | INFO     | --- collectZombieJob: --- 10, [3894411]
[2026-04-12 16:43:16] 2026-04-12 14:42:33,060 | INFO     | zombie collector waiting for pid 3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:33,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 16:43:16] 2026-04-12 14:42:33,060 | INFO     | collected zombie processes
[2026-04-12 16:43:16] 2026-04-12 14:42:33,060 | INFO     | will attempt to kill all subprocesses of pid=3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:33,460 | INFO     | process IDs to be killed: [3894411] (in reverse order)
[2026-04-12 16:43:16] 2026-04-12 14:42:33,607 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 16:43:16] 2026-04-12 14:42:33,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 16:43:16] 2026-04-12 14:42:33,664 | INFO     | did not find any defunct processes belonging to 3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:33,709 | INFO     | did not find any defunct processes belonging to 3894411
[2026-04-12 16:43:16] 2026-04-12 14:42:33,710 | INFO     | Ready for new job
[2026-04-12 16:43:16] 2026-04-12 14:42:33,711 | INFO     | **************************************
[2026-04-12 16:43:16] 2026-04-12 14:42:33,711 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 16:43:16] 2026-04-12 14:42:33,711 | INFO     | **************************************
[2026-04-12 16:43:16] 2026-04-12 14:42:33,711 | INFO     | 
[2026-04-12 16:43:16] 2026-04-12 14:42:33,718 | INFO     | architecture information:
[2026-04-12 16:43:16] 2026-04-12 14:42:33,720 | INFO     | executing command: cat /etc/os-release
[2026-04-12 16:43:16] 2026-04-12 14:42:33,732 | INFO     | cat /etc/os-release:
[2026-04-12 16:43:16] NAME="CentOS Linux"
[2026-04-12 16:43:16] VERSION="7 (Core)"
[2026-04-12 16:43:16] ID="centos"
[2026-04-12 16:43:16] ID_LIKE="rhel fedora"
[2026-04-12 16:43:16] VERSION_ID="7"
[2026-04-12 16:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 16:43:16] ANSI_COLOR="0;31"
[2026-04-12 16:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 16:43:16] HOME_URL="https://www.centos.org/"
[2026-04-12 16:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 16:43:16] 
[2026-04-12 16:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 16:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 16:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 16:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 16:43:16] 
[2026-04-12 16:43:16] 2026-04-12 14:42:33,732 | INFO     | **************************************
[2026-04-12 16:43:16] 2026-04-12 14:42:33,877 | WARNING  | process 3894411 can no longer be monitored (due to stat problems) - aborting
[2026-04-12 16:43:16] 2026-04-12 14:42:34,145 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 16:43:16] 2026-04-12 14:42:34,235 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-04-12 16:43:16] 2026-04-12 14:42:34,248 | INFO     | sufficient remaining disk space (189285793792 B)
[2026-04-12 16:43:16] 2026-04-12 14:42:34,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 16:43:16] 2026-04-12 14:42:34,248 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 16:43:16] 2026-04-12 14:42:34,248 | INFO     | update_server=False
[2026-04-12 16:43:16] 2026-04-12 14:42:34,248 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 16:43:16] 2026-04-12 14:42:34,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 16:43:16] 2026-04-12 14:42:34,452 | INFO     | all job control threads have been joined
[2026-04-12 16:43:16] 2026-04-12 14:42:34,485 | INFO     | all payload control threads have been joined
[2026-04-12 16:43:16] 2026-04-12 14:42:34,515 | INFO     | number of running child processes to parent process 3894411: 1
[2026-04-12 16:43:16] 2026-04-12 14:42:34,515 | INFO     | maximum number of monitored processes: 6
[2026-04-12 16:43:16] 2026-04-12 14:42:34,515 | INFO     | aborting job monitoring since job object (job id=7087054834) has expired
[2026-04-12 16:43:16] 2026-04-12 14:42:34,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 16:43:16] 2026-04-12 14:42:34,515 | INFO     | will abort loop
[2026-04-12 16:43:16] 2026-04-12 14:42:34,767 | INFO     | all data control threads have been joined
[2026-04-12 16:43:16] 2026-04-12 14:42:35,253 | INFO     | [job] retrieve thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:35,458 | INFO     | [job] control thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:35,490 | INFO     | [payload] control thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:35,520 | INFO     | [job] job monitor thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:35,738 | INFO     | [payload] failed_post thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:35,773 | INFO     | [data] control thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,081 | INFO     | [job] validate thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,232 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,254 | INFO     | [data] copytool_out thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,284 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,370 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,448 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,565 | INFO     | [data] copytool_in thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,732 | INFO     | [payload] validate_post thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:36,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 16:43:16] 2026-04-12 14:42:36,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 16:43:16] 2026-04-12 14:42:37,772 | INFO     | [job] queue monitor thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:40,780 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 16:43:16] 2026-04-12 14:42:53,884 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-04-12 16:43:16] 2026-04-12 14:43:01,192 | INFO     | [monitor] cgroup control has ended
[2026-04-12 16:43:16] 2026-04-12 14:43:01,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22401500587840)>', '<ExcThread(monitor, started 22401263089408)>']
[2026-04-12 16:43:16] 2026-04-12 14:43:05,140 | INFO     | PID=3880951 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | INFO     | .. there are 15 such processes running
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 16:43:16] 2026-04-12 14:43:05,141 | INFO     | [monitor] control thread has ended
[2026-04-12 16:43:16] 2026-04-12 14:43:06,286 | INFO     | all workflow threads have been joined
[2026-04-12 16:43:16] 2026-04-12 14:43:06,286 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 16:43:16] 2026-04-12 14:43:06,286 | INFO     | traces error code: 0
[2026-04-12 16:43:16] 2026-04-12 14:43:06,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 16:43:16] 2026-04-12 14:43:06,423 [wrapper] ==== pilot stdout END ====
[2026-04-12 16:43:16] 2026-04-12 14:43:06,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 16:43:16] 2026-04-12 14:43:06,428 [wrapper] pilotpid: 3880951
[2026-04-12 16:43:16] 2026-04-12 14:43:06,430 [wrapper] Pilot exit status: 0
[2026-04-12 16:43:16] 2026-04-12 14:43:06,441 [wrapper] pandaids: 7087054834
[2026-04-12 16:43:16] 2026-04-12 14:43:06,547 [wrapper] cleanup supervisor_pilot 4135430 3880952
[2026-04-12 16:43:16] 2026-04-12 14:43:06,549 [wrapper] Test setup, not cleaning
[2026-04-12 16:43:16] 2026-04-12 14:43:06,552 [wrapper] apfmon messages muted
[2026-04-12 16:43:16] 2026-04-12 14:43:06,554 [wrapper] ==== wrapper stdout END ====
[2026-04-12 16:43:16] 2026-04-12 14:43:06,556 [wrapper] ==== wrapper stderr END ====
[2026-04-12 16:43:16]  *** Error codes and diagnostics ***
[2026-04-12 16:43:16]     "exeErrorCode": 0,
[2026-04-12 16:43:16]     "pilotErrorCode": 0,
[2026-04-12 16:43:16]  *** Listing of results directory ***
[2026-04-12 16:43:16] total 415116
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc    644190 Apr 11 15:38 pilot3.tar.gz
[2026-04-12 16:43:16] -rwx------. 1 boinc boinc     36322 Apr 11 16:00 runpilot2-wrapper.sh
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc      5094 Apr 11 16:01 queuedata.json
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc       100 Apr 12 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 16:43:16] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 16:12 run_atlas
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc       105 Apr 12 16:12 job.xml
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc 222610301 Apr 12 16:12 EVNT.49263206._000931.pool.root.1
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc     15665 Apr 12 16:12 start_atlas.sh
[2026-04-12 16:43:16] drwxrwx--x. 2 boinc boinc      4096 Apr 12 16:12 shared
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc    656936 Apr 12 16:12 input.tar.gz
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc      6626 Apr 12 16:12 init_data.xml
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc         0 Apr 12 16:12 boinc_lockfile
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc      2575 Apr 12 16:12 pandaJob.out
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc    997759 Apr 12 16:12 agis_schedconf.cvmfs.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc   1511579 Apr 12 16:12 agis_ddmendpoints.agis.ALL.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc       443 Apr 12 16:12 workernode_map.json
[2026-04-12 16:43:16] drwx------. 5 boinc boinc      4096 Apr 12 16:12 pilot3
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc 197311907 Apr 12 16:42 HITS.49263208._036680.pool.root.1
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc       486 Apr 12 16:42 boinc_task_state.xml
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc      1029 Apr 12 16:42 memory_monitor_summary.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc    337452 Apr 12 16:42 log.49263208._036680.job.log.tgz.1
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc      6379 Apr 12 16:42 heartbeat_new.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc      6270 Apr 12 16:42 heartbeat.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc        95 Apr 12 16:42 pilot_heartbeat.json
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc      5361 Apr 12 16:43 pilotlog.txt
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc    211946 Apr 12 16:43 log.49263208._036680.job.log.1
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc       357 Apr 12 16:43 output.list
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc       410 Apr 12 16:43 runtime_log
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc    563200 Apr 12 16:43 result.tar.gz
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc      8828 Apr 12 16:43 runtime_log.err
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc       660 Apr 12 16:43 53f142d45f7c.diag
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc        26 Apr 12 16:43 wrapper_checkpoint.txt
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc      8192 Apr 12 16:43 boinc_mmap_file
[2026-04-12 16:43:16] -rw-r--r--. 1 boinc boinc     21106 Apr 12 16:43 stderr.txt
[2026-04-12 16:43:16] HITS file was successfully produced:
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc 197311907 Apr 12 16:42 shared/HITS.pool.root.1
[2026-04-12 16:43:16]  *** Contents of shared directory: ***
[2026-04-12 16:43:16] total 411304
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc 222610301 Apr 12 16:12 ATLAS.root_0
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc     15665 Apr 12 16:12 start_atlas.sh
[2026-04-12 16:43:16] -rw-r--r--. 2 boinc boinc    656936 Apr 12 16:12 input.tar.gz
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc 197311907 Apr 12 16:42 HITS.pool.root.1
[2026-04-12 16:43:16] -rw-------. 1 boinc boinc    563200 Apr 12 16:43 result.tar.gz
16:43:17 (3872394): run_atlas exited; CPU time 18063.929065
16:43:17 (3872394): called boinc_finish(0)

</stderr_txt>
]]>

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