Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:00:01 (1368951): wrapper (7.7.26015): starting
12:00:01 (1368951): wrapper: running run_atlas (--nthreads 12)
[2026-04-13 12:00:01] Arguments: --nthreads 12
[2026-04-13 12:00:01] Threads: 12
[2026-04-13 12:00:01] Checking for CVMFS
[2026-04-13 12:00:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-13 12:00:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-13 12:00:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-13 12:00:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-13 12:00:03] 2.13.3.0 333970 4488 61132 158415 1 188 3748493 4096000 16462 130560 0 40678320 99.988 448275 1326 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-13 12:00:03] CVMFS is ok
[2026-04-13 12:00:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 12:00:03] Checking for apptainer binary...
[2026-04-13 12:00:03] apptainer is not installed, using version from CVMFS
[2026-04-13 12:00:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 12:00:05] epyc7v12
[2026-04-13 12:00:05] apptainer works
[2026-04-13 12:00:05] Set ATHENA_PROC_NUMBER=12
[2026-04-13 12:00:05] Set ATHENA_CORE_NUMBER=12
[2026-04-13 12:00:05] Starting ATLAS job with PandaID=7087027005
[2026-04-13 12:00:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 14:08:10]  *** The last 200 lines of the pilot log: ***
[2026-04-13 14:08:10] 2026-04-13 14:07:24,100 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31418/slots/0/workernode_map.json
[2026-04-13 14:08:10] 2026-04-13 14:07:24,100 | INFO     | this job has now completed (state=finished)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,100 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,101 | INFO     | log transfer has been attempted: DONE
[2026-04-13 14:08:10] 2026-04-13 14:07:24,101 | INFO     | job 7087027005 has finished - writing final server update
[2026-04-13 14:08:10] 2026-04-13 14:07:24,106 | INFO     | total number of processed events: 400 (read)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,158 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-7087027005/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,159 | INFO     | extracted standard info from prmon json
[2026-04-13 14:08:10] 2026-04-13 14:07:24,159 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 14:08:10] 2026-04-13 14:07:24,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 14:08:10] 2026-04-13 14:07:24,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 14:08:10] 2026-04-13 14:07:24,162 | INFO     | fitting pss+swap vs Time
[2026-04-13 14:08:10] 2026-04-13 14:07:24,162 | INFO     | sum of square deviations: 591173875.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,163 | INFO     | sum of deviations: 28400981948.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,163 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,163 | INFO     | mean y: 2559552.580645161
[2026-04-13 14:08:10] 2026-04-13 14:07:24,164 | INFO     | intersect: 2559552.580645161
[2026-04-13 14:08:10] 2026-04-13 14:07:24,164 | INFO     | chi2: 3.038324170268222
[2026-04-13 14:08:10] 2026-04-13 14:07:24,164 | INFO     | sum of square deviations: 522502820.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | sum of deviations: 36059894288.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | mean y: 2575896.907563025
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | intersect: 2575896.907563025
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | chi2: 2.1834302532674728
[2026-04-13 14:08:10] 2026-04-13 14:07:24,165 | INFO     | current chi2=2.1834302532674728 (change=28.137021235797878 %)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,166 | INFO     | sum of square deviations: 459366752.5
[2026-04-13 14:08:10] 2026-04-13 14:07:24,166 | INFO     | sum of deviations: 34396967096.5
[2026-04-13 14:08:10] 2026-04-13 14:07:24,166 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | mean y: 2571877.7280701753
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | intersect: 2571877.7280701753
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | chi2: 2.1810794877046806
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | current chi2=2.1810794877046806 (change=0.10766387244448206 %)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | right removable region: 113
[2026-04-13 14:08:10] 2026-04-13 14:07:24,167 | INFO     | sum of square deviations: 522502820.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,168 | INFO     | sum of deviations: 840208937.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,168 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,168 | INFO     | mean y: 2620134.2352941176
[2026-04-13 14:08:10] 2026-04-13 14:07:24,168 | INFO     | intersect: 2620134.2352941176
[2026-04-13 14:08:10] 2026-04-13 14:07:24,169 | INFO     | chi2: 1.0267572017500277
[2026-04-13 14:08:10] 2026-04-13 14:07:24,169 | INFO     | current chi2=1.0267572017500277 (change=66.2064630299345 %)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,169 | INFO     | sum of square deviations: 459366752.5
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | sum of deviations: -6784735004.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | mean y: 2638457.8421052634
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | intersect: 2638457.8421052634
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | chi2: 0.8938162663748205
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | current chi2=0.8938162663748205 (change=12.947650637231447 %)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,170 | INFO     | left removable region: 10
[2026-04-13 14:08:10] 2026-04-13 14:07:24,171 | INFO     | sum of square deviations: 338804492.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,171 | INFO     | sum of deviations: 1500655815.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,171 | INFO     | mean x (centered): 0.0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,171 | INFO     | mean y: 2659476.834951456
[2026-04-13 14:08:10] 2026-04-13 14:07:24,172 | INFO     | intersect: 2659476.834951456
[2026-04-13 14:08:10] 2026-04-13 14:07:24,172 | INFO     | chi2: 0.0012479825948271263
[2026-04-13 14:08:10] 2026-04-13 14:07:24,172 | INFO     | current memory leak: 4.43 B/s (using 103 data points, chi2=0.00)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,172 | INFO     | could have reported an average CPU frequency of 2389 MHz (8 samples)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | ..............................
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . Timing measurements:
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . get job = 0 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . initial setup = 16 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . payload setup = 26 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . stage-in = 0 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . payload execution = 7553 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . stage-out = 1 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | . log creation = 0 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,173 | INFO     | ..............................
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | 
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | job summary report
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | --------------------------------------------------
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | PanDA job id: 7087027005
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | task id: 49263191
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | errors: (none)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,277 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | pilot state: finished 
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | transexitcode: 0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | exeerrorcode: 0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | exeerrordiag: 
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | exitcode: 0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | exitmsg: OK
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | cpuconsumptiontime: 46300 s
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | nevents: 400
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | neventsw: 0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | pid: 1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | pgrp: 1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:24,278 | INFO     | corecount: 12
[2026-04-13 14:08:10] 2026-04-13 14:07:24,279 | INFO     | event service: False
[2026-04-13 14:08:10] 2026-04-13 14:07:24,279 | INFO     | sizes: {0: 2279638, 1: 2279722, 2: 2281551, 7584: 2309242, 7587: 2318286, 7590: 2318664}
[2026-04-13 14:08:10] 2026-04-13 14:07:24,279 | INFO     | --------------------------------------------------
[2026-04-13 14:08:10] 2026-04-13 14:07:24,279 | INFO     | 
[2026-04-13 14:08:10] 2026-04-13 14:07:24,282 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-04-13 14:08:10] 2026-04-13 14:07:24,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,343 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,346 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 14:08:10] 2026-04-13 14:07:24,347 | INFO     | job 7087027005 has completed (purged errors)
[2026-04-13 14:08:10] 2026-04-13 14:07:24,347 | INFO     | overall cleanup function is called
[2026-04-13 14:08:10] 2026-04-13 14:07:25,357 | INFO     | --- collectZombieJob: --- 10, [1383741]
[2026-04-13 14:08:10] 2026-04-13 14:07:25,357 | INFO     | zombie collector waiting for pid 1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:25,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 14:08:10] 2026-04-13 14:07:25,358 | INFO     | collected zombie processes
[2026-04-13 14:08:10] 2026-04-13 14:07:25,358 | INFO     | will attempt to kill all subprocesses of pid=1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:26,583 | INFO     | process IDs to be killed: [1383741] (in reverse order)
[2026-04-13 14:08:10] 2026-04-13 14:07:27,037 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 14:08:10] 2026-04-13 14:07:27,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 14:08:10] 2026-04-13 14:07:27,073 | INFO     | did not find any defunct processes belonging to 1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:27,108 | INFO     | did not find any defunct processes belonging to 1383741
[2026-04-13 14:08:10] 2026-04-13 14:07:27,108 | INFO     | Ready for new job
[2026-04-13 14:08:10] 2026-04-13 14:07:27,110 | INFO     | **************************************
[2026-04-13 14:08:10] 2026-04-13 14:07:27,113 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 14:08:10] 2026-04-13 14:07:27,113 | INFO     | **************************************
[2026-04-13 14:08:10] 2026-04-13 14:07:27,113 | INFO     | 
[2026-04-13 14:08:10] 2026-04-13 14:07:27,133 | INFO     | architecture information:
[2026-04-13 14:08:10] 2026-04-13 14:07:27,137 | INFO     | executing command: cat /etc/os-release
[2026-04-13 14:08:10] 2026-04-13 14:07:27,181 | INFO     | cat /etc/os-release:
[2026-04-13 14:08:10] NAME="CentOS Linux"
[2026-04-13 14:08:10] VERSION="7 (Core)"
[2026-04-13 14:08:10] ID="centos"
[2026-04-13 14:08:10] ID_LIKE="rhel fedora"
[2026-04-13 14:08:10] VERSION_ID="7"
[2026-04-13 14:08:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 14:08:10] ANSI_COLOR="0;31"
[2026-04-13 14:08:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 14:08:10] HOME_URL="https://www.centos.org/"
[2026-04-13 14:08:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 14:08:10] 
[2026-04-13 14:08:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 14:08:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 14:08:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 14:08:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 14:08:10] 
[2026-04-13 14:08:10] 2026-04-13 14:07:27,182 | INFO     | **************************************
[2026-04-13 14:08:10] 2026-04-13 14:07:27,685 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-04-13 14:08:10] 2026-04-13 14:07:27,729 | INFO     | sufficient remaining disk space (326874693632 B)
[2026-04-13 14:08:10] 2026-04-13 14:07:27,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 14:08:10] 2026-04-13 14:07:27,729 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 14:08:10] 2026-04-13 14:07:27,729 | INFO     | update_server=False
[2026-04-13 14:08:10] 2026-04-13 14:07:27,730 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 14:08:10] 2026-04-13 14:07:27,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 14:08:10] 2026-04-13 14:07:27,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 14:08:10] 2026-04-13 14:07:27,732 | INFO     | aborting loop
[2026-04-13 14:08:10] 2026-04-13 14:07:27,821 | INFO     | all data control threads have been joined
[2026-04-13 14:08:10] 2026-04-13 14:07:27,855 | INFO     | all job control threads have been joined
[2026-04-13 14:08:10] 2026-04-13 14:07:28,661 | INFO     | all payload control threads have been joined
[2026-04-13 14:08:10] 2026-04-13 14:07:28,737 | INFO     | [job] job monitor thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:28,738 | INFO     | [job] retrieve thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:28,826 | INFO     | [data] control thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:28,827 | INFO     | [payload] validate_post thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:28,860 | INFO     | [job] control thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,286 | INFO     | [data] copytool_in thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,287 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 14:08:10] 2026-04-13 14:07:29,571 | INFO     | [job] validate thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,572 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,666 | INFO     | [payload] control thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,687 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,737 | INFO     | [data] copytool_out thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,787 | INFO     | [payload] failed_post thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:29,965 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:30,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 14:08:10] 2026-04-13 14:07:30,293 | INFO     | [job] queue monitor thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:34,110 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 14:08:10] 2026-04-13 14:07:56,844 | INFO     | PID=1373150 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 14:08:10] 2026-04-13 14:07:56,844 | INFO     | .. there are 20 such processes running
[2026-04-13 14:08:10] 2026-04-13 14:07:56,845 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 14:08:10] 2026-04-13 14:07:56,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 14:08:10] 2026-04-13 14:07:56,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 14:08:10] 2026-04-13 14:08:04,073 | INFO     | [monitor] cgroup control has ended
[2026-04-13 14:08:10] 2026-04-13 14:08:04,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125414846306112)>', '<ExcThread(monitor, started 125414278145792)>']
[2026-04-13 14:08:10] 2026-04-13 14:08:04,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 14:08:10] 2026-04-13 14:08:04,889 | INFO     | [monitor] control thread has ended
[2026-04-13 14:08:10] 2026-04-13 14:08:09,514 | INFO     | all workflow threads have been joined
[2026-04-13 14:08:10] 2026-04-13 14:08:09,514 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 14:08:10] 2026-04-13 14:08:09,515 | INFO     | traces error code: 0
[2026-04-13 14:08:10] 2026-04-13 14:08:09,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 14:08:10] 2026-04-13 14:08:09,773 [wrapper] ==== pilot stdout END ====
[2026-04-13 14:08:10] 2026-04-13 14:08:09,781 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 14:08:10] 2026-04-13 14:08:09,791 [wrapper] pilotpid: 1373150
[2026-04-13 14:08:10] 2026-04-13 14:08:09,798 [wrapper] Pilot exit status: 0
[2026-04-13 14:08:10] 2026-04-13 14:08:09,830 [wrapper] pandaids: 7087027005
[2026-04-13 14:08:10] 2026-04-13 14:08:10,002 [wrapper] cleanup supervisor_pilot 1630555 1373151
[2026-04-13 14:08:10] 2026-04-13 14:08:10,011 [wrapper] Test setup, not cleaning
[2026-04-13 14:08:10] 2026-04-13 14:08:10,021 [wrapper] apfmon messages muted
[2026-04-13 14:08:10] 2026-04-13 14:08:10,030 [wrapper] ==== wrapper stdout END ====
[2026-04-13 14:08:10] 2026-04-13 14:08:10,041 [wrapper] ==== wrapper stderr END ====
[2026-04-13 14:08:10]  *** Error codes and diagnostics ***
[2026-04-13 14:08:10]     "exeErrorCode": 0,
[2026-04-13 14:08:10]     "pilotErrorCode": 0,
[2026-04-13 14:08:10]  *** Listing of results directory ***
[2026-04-13 14:08:10] total 408720
[2026-04-13 14:08:10] -rw-r--r-- 1 boinc boinc    644190 Apr 11 11:59 pilot3.tar.gz
[2026-04-13 14:08:10] -rwx------ 1 boinc boinc     36322 Apr 11 12:43 runpilot2-wrapper.sh
[2026-04-13 14:08:10] -rw-r--r-- 1 boinc boinc      5094 Apr 11 12:46 queuedata.json
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc       100 Apr 13 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 14:08:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 12:00 run_atlas
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc       105 Apr 13 12:00 job.xml
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc 220369308 Apr 13 12:00 EVNT.49263189._001088.pool.root.1
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc     15665 Apr 13 12:00 start_atlas.sh
[2026-04-13 14:08:10] drwxrwx--x 2 boinc boinc      4096 Apr 13 12:00 shared
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc    656926 Apr 13 12:00 input.tar.gz
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc      6931 Apr 13 12:00 init_data.xml
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc         0 Apr 13 12:00 boinc_setup_complete
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc         0 Apr 13 12:00 boinc_lockfile
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc      2578 Apr 13 12:00 pandaJob.out
[2026-04-13 14:08:10] -rw------- 1 boinc boinc    997740 Apr 13 12:00 agis_schedconf.cvmfs.json
[2026-04-13 14:08:10] -rw------- 1 boinc boinc   1511579 Apr 13 12:00 agis_ddmendpoints.agis.ALL.json
[2026-04-13 14:08:10] -rw------- 1 boinc boinc       420 Apr 13 12:00 workernode_map.json
[2026-04-13 14:08:10] drwx------ 5 boinc boinc      4096 Apr 13 12:00 pilot3
[2026-04-13 14:08:10] -rw------- 1 boinc boinc 191863089 Apr 13 14:06 HITS.49263191._047691.pool.root.1
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc       487 Apr 13 14:06 boinc_task_state.xml
[2026-04-13 14:08:10] -rw------- 1 boinc boinc      1036 Apr 13 14:07 memory_monitor_summary.json
[2026-04-13 14:08:10] -rw------- 1 boinc boinc    406904 Apr 13 14:07 log.49263191._047691.job.log.tgz.1
[2026-04-13 14:08:10] -rw------- 1 boinc boinc      6296 Apr 13 14:07 heartbeat_new.json
[2026-04-13 14:08:10] -rw------- 1 boinc boinc      6187 Apr 13 14:07 heartbeat.json
[2026-04-13 14:08:10] -rw------- 1 boinc boinc        95 Apr 13 14:07 pilot_heartbeat.json
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc      8192 Apr 13 14:08 boinc_mmap_file
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc        27 Apr 13 14:08 wrapper_checkpoint.txt
[2026-04-13 14:08:10] -rw------- 1 boinc boinc      4843 Apr 13 14:08 pilotlog.txt
[2026-04-13 14:08:10] -rw------- 1 boinc boinc    708347 Apr 13 14:08 log.49263191._047691.job.log.1
[2026-04-13 14:08:10] -rw------- 1 boinc boinc       357 Apr 13 14:08 output.list
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc       410 Apr 13 14:08 runtime_log
[2026-04-13 14:08:10] -rw------- 1 boinc boinc   1136640 Apr 13 14:08 result.tar.gz
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc      8788 Apr 13 14:08 runtime_log.err
[2026-04-13 14:08:10] -rw------- 1 boinc boinc       652 Apr 13 14:08 41df389d3ed0.diag
[2026-04-13 14:08:10] -rw-rw-r-- 1 boinc boinc     20778 Apr 13 14:08 stderr.txt
[2026-04-13 14:08:10] HITS file was successfully produced:
[2026-04-13 14:08:10] -rw------- 1 boinc boinc 191863089 Apr 13 14:06 shared/HITS.pool.root.1
[2026-04-13 14:08:10]  *** Contents of shared directory: ***
[2026-04-13 14:08:10] total 404356
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc 220369308 Apr 13 12:00 ATLAS.root_0
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc     15665 Apr 13 12:00 start_atlas.sh
[2026-04-13 14:08:10] -rw-r--r-- 2 boinc boinc    656926 Apr 13 12:00 input.tar.gz
[2026-04-13 14:08:10] -rw------- 1 boinc boinc 191863089 Apr 13 14:06 HITS.pool.root.1
[2026-04-13 14:08:10] -rw------- 1 boinc boinc   1136640 Apr 13 14:08 result.tar.gz
14:08:11 (1368951): run_atlas exited; CPU time 46737.280719
14:08:11 (1368951): called boinc_finish(0)

</stderr_txt>
]]>

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