Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:41:09 (24266): wrapper (7.7.26015): starting
20:41:09 (24266): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 20:41:09] Arguments: --nthreads 8
[2026-04-11 20:41:09] Threads: 8
[2026-04-11 20:41:09] Checking for CVMFS
[2026-04-11 20:41:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 20:41:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 20:41:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 20:41:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 20:41:09] 2.11.0.0 4259 262300 82604 158353 0 1 2851848 4096001 0 130560 4 19985574 99.657 16053649 385 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-11 20:41:09] CVMFS is ok
[2026-04-11 20:41:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 20:41:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 20:41:09] Further information can be found at the LHC@home message board.
[2026-04-11 20:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 20:41:09] Checking for apptainer binary...
[2026-04-11 20:41:09] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-11 20:41:09] apptainer is not installed, using version from CVMFS
[2026-04-11 20:41:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 20:41:10] WARNING: Environment variable TMPDIR already has value [/tmp/job_11490299/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node282
[2026-04-11 20:41:10] apptainer works
[2026-04-11 20:41:10] Set ATHENA_PROC_NUMBER=8
[2026-04-11 20:41:10] Set ATHENA_CORE_NUMBER=8
[2026-04-11 20:41:10] Starting ATLAS job with PandaID=7087053920
[2026-04-11 20:41:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11490299/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 21:33:29]  *** The last 200 lines of the pilot log: ***
[2026-04-11 21:33:29]  filetype=log
[2026-04-11 21:33:29]  guid=7975e9d6-f785-4863-be3e-1c11b338c6c1
[2026-04-11 21:33:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-11 21:33:29]  is_altstaged=None
[2026-04-11 21:33:29]  is_tar=False
[2026-04-11 21:33:29]  lfn=log.49263200._044298.job.log.tgz.1
[2026-04-11 21:33:29]  mtime=0
[2026-04-11 21:33:29]  protocol_id=None
[2026-04-11 21:33:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-11 21:33:29]  replicas=None
[2026-04-11 21:33:29]  scope=mc23_13p6TeV
[2026-04-11 21:33:29]  status=None
[2026-04-11 21:33:29]  status_code=0
[2026-04-11 21:33:29]  storage_token=
[2026-04-11 21:33:29]  surl=/tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/log.49263200._044298.job.log.tgz.1
[2026-04-11 21:33:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/4e/log.49263200._044298.job.log.tgz.1
[2026-04-11 21:33:29]  workdir=None
[2026-04-11 21:33:29] ]
[2026-04-11 21:33:29] 2026-04-11 19:32:50,747 | INFO     | transferring file log.49263200._044298.job.log.tgz.1 from /tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/log.49263200._044298.job.log.tgz.1 to /tmp/j
[2026-04-11 21:33:29] 2026-04-11 19:32:50,747 | INFO     | executing command: /usr/bin/env mv /tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/log.49263200._044298.job.log.tgz.1 /tmp/job_11490299/atlas/pilot/sl
[2026-04-11 21:33:29] 2026-04-11 19:32:50,755 | INFO     | adding to output.list: log.49263200._044298.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/4e/log.49263200._044298.job.log.tg
[2026-04-11 21:33:29] 2026-04-11 19:32:50,756 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-11 21:33:29] 2026-04-11 19:32:50,756 | INFO     | summary of transferred files:
[2026-04-11 21:33:29] 2026-04-11 19:32:50,756 | INFO     |  -- lfn=log.49263200._044298.job.log.tgz.1, status_code=0, status=transferred
[2026-04-11 21:33:29] 2026-04-11 19:32:50,756 | INFO     | stage-out finished correctly
[2026-04-11 21:33:29] 2026-04-11 19:32:52,769 | WARNING  | process 32605 can no longer be monitored (due to stat problems) - aborting
[2026-04-11 21:33:29] 2026-04-11 19:32:52,769 | INFO     | using path: /tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 21:33:29] 2026-04-11 19:32:52,856 | INFO     | number of running child processes to parent process 32605: 1
[2026-04-11 21:33:29] 2026-04-11 19:32:52,856 | INFO     | maximum number of monitored processes: 6
[2026-04-11 21:33:29] 2026-04-11 19:32:53,966 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 21:33:29] 2026-04-11 19:32:55,358 | INFO     | monitor loop #237: job 0:7087053920 is in state 'finished'
[2026-04-11 21:33:29] 2026-04-11 19:32:55,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,885 | INFO     | job 7087053920 has state=finished
[2026-04-11 21:33:29] 2026-04-11 19:32:56,885 | INFO     | preparing for final server update for job 7087053920 in state='finished'
[2026-04-11 21:33:29] 2026-04-11 19:32:56,886 | INFO     | reading metadata from: /tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/jobReport.json
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | added worker_node to metadata from /tmp/job_11490299/atlas/pilot/slots/0/workernode_map.json
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | this job has now completed (state=finished)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | log transfer has been attempted: DONE
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | job 7087053920 has finished - writing final server update
[2026-04-11 21:33:29] 2026-04-11 19:32:56,887 | INFO     | total number of processed events: 400 (read)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,904 | INFO     | using path: /tmp/job_11490299/atlas/pilot/slots/0/PanDA_Pilot-7087053920/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,904 | INFO     | extracted standard info from prmon json
[2026-04-11 21:33:29] 2026-04-11 19:32:56,904 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 21:33:29] 2026-04-11 19:32:56,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 21:33:29] 2026-04-11 19:32:56,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | fitting pss+swap vs Time
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | sum of square deviations: 26400495.0
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | sum of deviations: -3036765989.0000005
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | mean x (centered): 0.0
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | mean y: 2667353.9545454546
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | intersect: 2667353.9545454546
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | chi2: 0.023727236287648244
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | current memory leak: -115.03 B/s (using 44 data points, chi2=0.02)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | ..............................
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | . Timing measurements:
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | . get job = 0 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | . initial setup = 2 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,905 | INFO     | . payload setup = 3 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,906 | INFO     | . stage-in = 0 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,906 | INFO     | . payload execution = 3075 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,906 | INFO     | . stage-out = 0 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,906 | INFO     | . log creation = 0 s
[2026-04-11 21:33:29] 2026-04-11 19:32:56,906 | INFO     | ..............................
[2026-04-11 21:33:29] 2026-04-11 19:32:57,087 | INFO     | 
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | job summary report
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | --------------------------------------------------
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | PanDA job id: 7087053920
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | task id: 49263200
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | errors: (none)
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | pilot state: finished 
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | transexitcode: 0
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | exeerrorcode: 0
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | exeerrordiag: 
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | exitcode: 0
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | exitmsg: OK
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | cpuconsumptiontime: 20929 s
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | nevents: 400
[2026-04-11 21:33:29] 2026-04-11 19:32:57,088 | INFO     | neventsw: 0
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | pid: 32605
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | pgrp: 32605
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | corecount: 8
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | event service: False
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | sizes: {0: 2281596, 11: 2281596, 3082: 2307150, 3083: 2316178, 3086: 2316234, 3089: 2316460}
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | --------------------------------------------------
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | 
[2026-04-11 21:33:29] 2026-04-11 19:32:57,089 | INFO     | executing command: ls -lF /tmp/job_11490299/atlas/pilot/slots/0
[2026-04-11 21:33:29] 2026-04-11 19:32:57,099 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | job 7087053920 has completed (purged errors)
[2026-04-11 21:33:29] 2026-04-11 19:32:57,100 | INFO     | overall cleanup function is called
[2026-04-11 21:33:29] 2026-04-11 19:32:58,106 | INFO     | --- collectZombieJob: --- 10, [32605]
[2026-04-11 21:33:29] 2026-04-11 19:32:58,106 | INFO     | zombie collector waiting for pid 32605
[2026-04-11 21:33:29] 2026-04-11 19:32:58,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 21:33:29] 2026-04-11 19:32:58,107 | INFO     | collected zombie processes
[2026-04-11 21:33:29] 2026-04-11 19:32:58,107 | INFO     | will attempt to kill all subprocesses of pid=32605
[2026-04-11 21:33:29] 2026-04-11 19:32:58,197 | INFO     | process IDs to be killed: [32605] (in reverse order)
[2026-04-11 21:33:29] 2026-04-11 19:32:58,228 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 21:33:29] 2026-04-11 19:32:58,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 21:33:29] 2026-04-11 19:32:58,232 | INFO     | did not find any defunct processes belonging to 32605
[2026-04-11 21:33:29] 2026-04-11 19:32:58,234 | INFO     | did not find any defunct processes belonging to 32605
[2026-04-11 21:33:29] 2026-04-11 19:32:58,235 | INFO     | Ready for new job
[2026-04-11 21:33:29] 2026-04-11 19:32:58,235 | INFO     | **************************************
[2026-04-11 21:33:29] 2026-04-11 19:32:58,235 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 21:33:29] 2026-04-11 19:32:58,235 | INFO     | **************************************
[2026-04-11 21:33:29] 2026-04-11 19:32:58,235 | INFO     | 
[2026-04-11 21:33:29] 2026-04-11 19:32:58,248 | INFO     | architecture information:
[2026-04-11 21:33:29] 2026-04-11 19:32:58,248 | INFO     | executing command: cat /etc/os-release
[2026-04-11 21:33:29] 2026-04-11 19:32:58,255 | INFO     | cat /etc/os-release:
[2026-04-11 21:33:29] NAME="CentOS Linux"
[2026-04-11 21:33:29] VERSION="7 (Core)"
[2026-04-11 21:33:29] ID="centos"
[2026-04-11 21:33:29] ID_LIKE="rhel fedora"
[2026-04-11 21:33:29] VERSION_ID="7"
[2026-04-11 21:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 21:33:29] ANSI_COLOR="0;31"
[2026-04-11 21:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 21:33:29] HOME_URL="https://www.centos.org/"
[2026-04-11 21:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 21:33:29] 
[2026-04-11 21:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 21:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 21:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 21:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 21:33:29] 
[2026-04-11 21:33:29] 2026-04-11 19:32:58,255 | INFO     | **************************************
[2026-04-11 21:33:29] 2026-04-11 19:32:58,757 | INFO     | executing command: df -mP /tmp/job_11490299/atlas/pilot/slots/0
[2026-04-11 21:33:29] 2026-04-11 19:32:58,763 | INFO     | sufficient remaining disk space (225252999168 B)
[2026-04-11 21:33:29] 2026-04-11 19:32:58,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 21:33:29] 2026-04-11 19:32:58,763 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 21:33:29] 2026-04-11 19:32:58,763 | INFO     | update_server=False
[2026-04-11 21:33:29] 2026-04-11 19:32:58,763 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 21:33:29] 2026-04-11 19:32:58,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 21:33:29] 2026-04-11 19:32:58,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 21:33:29] 2026-04-11 19:32:58,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 21:33:29] 2026-04-11 19:32:58,866 | INFO     | aborting loop
[2026-04-11 21:33:29] 2026-04-11 19:32:58,935 | INFO     | all data control threads have been joined
[2026-04-11 21:33:29] 2026-04-11 19:32:59,130 | INFO     | all payload control threads have been joined
[2026-04-11 21:33:29] 2026-04-11 19:32:59,256 | INFO     | all job control threads have been joined
[2026-04-11 21:33:29] 2026-04-11 19:32:59,769 | INFO     | [job] retrieve thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,769 | INFO     | [job] queue monitor thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,770 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,872 | INFO     | [job] job monitor thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,896 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,940 | INFO     | [data] control thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:32:59,988 | INFO     | [payload] failed_post thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:00,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 21:33:29] 2026-04-11 19:33:00,135 | INFO     | [payload] control thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:00,206 | INFO     | [data] copytool_in thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:00,261 | INFO     | [job] control thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:00,607 | INFO     | [payload] validate_post thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:00,821 | INFO     | [data] copytool_out thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:01,069 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:01,110 | INFO     | [job] validate thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:04,027 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:09,421 | INFO     | job.realtimelogging is not enabled
[2026-04-11 21:33:29] 2026-04-11 19:33:10,426 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 21:33:29] 2026-04-11 19:33:21,402 | INFO     | [monitor] cgroup control has ended
[2026-04-11 21:33:29] 2026-04-11 19:33:23,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-04-11 21:33:29] 2026-04-11 19:33:28,521 | INFO     | all workflow threads have been joined
[2026-04-11 21:33:29] 2026-04-11 19:33:28,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 21:33:29] 2026-04-11 19:33:28,521 | INFO     | traces error code: 0
[2026-04-11 21:33:29] 2026-04-11 19:33:28,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | INFO     | PID=28159 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | INFO     | .. there are 2 such processes running
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 21:33:29] 2026-04-11 19:33:29,786 | INFO     | [monitor] control thread has ended
[2026-04-11 21:33:29] 2026-04-11 19:33:29,848 [wrapper] ==== pilot stdout END ====
[2026-04-11 21:33:29] 2026-04-11 19:33:29,849 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 21:33:29] 2026-04-11 19:33:29,850 [wrapper] pilotpid: 28159
[2026-04-11 21:33:29] 2026-04-11 19:33:29,851 [wrapper] Pilot exit status: 0
[2026-04-11 21:33:29] 2026-04-11 19:33:29,854 [wrapper] pandaids: 7087053920
[2026-04-11 21:33:29] 2026-04-11 19:33:29,874 [wrapper] cleanup supervisor_pilot 27227 28160
[2026-04-11 21:33:29] 2026-04-11 19:33:29,875 [wrapper] Test setup, not cleaning
[2026-04-11 21:33:29] 2026-04-11 19:33:29,876 [wrapper] apfmon messages muted
[2026-04-11 21:33:29] 2026-04-11 19:33:29,877 [wrapper] ==== wrapper stdout END ====
[2026-04-11 21:33:29] 2026-04-11 19:33:29,878 [wrapper] ==== wrapper stderr END ====
[2026-04-11 21:33:29]  *** Error codes and diagnostics ***
[2026-04-11 21:33:29]     "exeErrorCode": 0,
[2026-04-11 21:33:29]     "pilotErrorCode": 0,
[2026-04-11 21:33:29]  *** Listing of results directory ***
[2026-04-11 21:33:30] total 418588
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    644190 Apr 11 15:38 pilot3.tar.gz
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      5094 Apr 11 15:59 queuedata.json
[2026-04-11 21:33:30] -rwx------ 1 mf493845 unix-user     36322 Apr 11 16:00 runpilot2-wrapper.sh
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       100 Apr 11 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 21:33:30] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 11 19:44 run_atlas
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       105 Apr 11 19:44 job.xml
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user    656934 Apr 11 20:41 input.tar.gz
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user 223470663 Apr 11 20:41 EVNT.49263198._001068.pool.root.1
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 11 20:41 start_atlas.sh
[2026-04-11 21:33:30] drwxrwx--x 2 mf493845 unix-user       100 Apr 11 20:41 shared
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      6304 Apr 11 20:41 init_data.xml
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user         0 Apr 11 20:41 boinc_setup_complete
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      8192 Apr 11 20:41 boinc_mmap_file
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user         0 Apr 11 20:41 boinc_lockfile
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      2576 Apr 11 20:41 pandaJob.out
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    997828 Apr 11 20:41 agis_schedconf.cvmfs.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user   1511579 Apr 11 20:41 agis_ddmendpoints.agis.ALL.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       420 Apr 11 20:41 workernode_map.json
[2026-04-11 21:33:30] drwx------ 5 mf493845 unix-user       480 Apr 11 20:41 pilot3
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user 199860252 Apr 11 21:32 HITS.49263200._044298.pool.root.1
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user        95 Apr 11 21:32 pilot_heartbeat.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      1014 Apr 11 21:32 memory_monitor_summary.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    296510 Apr 11 21:32 log.49263200._044298.job.log.tgz.1
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      6343 Apr 11 21:32 heartbeat_new.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      6233 Apr 11 21:32 heartbeat.json
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       820 Apr 11 21:33 pilotlog.txt
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    339589 Apr 11 21:33 log.49263200._044298.job.log.1
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       357 Apr 11 21:33 output.list
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       410 Apr 11 21:33 runtime_log
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    655360 Apr 11 21:33 result.tar.gz
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user      8841 Apr 11 21:33 runtime_log.err
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user       644 Apr 11 21:33 53e0725eeecc.diag
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user     21753 Apr 11 21:33 stderr.txt
[2026-04-11 21:33:30] HITS file was successfully produced:
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user 199860252 Apr 11 21:32 shared/HITS.pool.root.1
[2026-04-11 21:33:30]  *** Contents of shared directory: ***
[2026-04-11 21:33:30] total 414716
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user    656934 Apr 11 20:41 input.tar.gz
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user 223470663 Apr 11 20:41 ATLAS.root_0
[2026-04-11 21:33:30] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 11 20:41 start_atlas.sh
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user 199860252 Apr 11 21:32 HITS.pool.root.1
[2026-04-11 21:33:30] -rw------- 1 mf493845 unix-user    655360 Apr 11 21:33 result.tar.gz
21:33:31 (24266): run_atlas exited; CPU time 20963.043607
21:33:31 (24266): called boinc_finish(0)

</stderr_txt>
]]>

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