Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:33:45 (1921719): wrapper (7.7.26015): starting
06:33:45 (1921719): wrapper: running run_atlas (--nthreads 3)
[2026-04-12 06:33:45] Arguments: --nthreads 3
[2026-04-12 06:33:45] Threads: 3
[2026-04-12 06:33:45] Checking for CVMFS
[2026-04-12 06:33:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 06:33:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 06:33:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 06:33:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 06:33:46] 2.9.2.0 1392236 3318 86816 158367 2 50 26447488 36864001 0 130560 0 2053948 99.988 137324 5889 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-12 06:33:46] CVMFS is ok
[2026-04-12 06:33:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 06:33:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 06:33:46] Further information can be found at the LHC@home message board.
[2026-04-12 06:33:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 06:33:46] Checking for apptainer binary...
[2026-04-12 06:33:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-12 06:33:46] Running /usr/bin/apptainer --version
[2026-04-12 06:33:46] apptainer version 1.4.1-1.1
[2026-04-12 06:33:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 06:33:46] belleA263b
[2026-04-12 06:33:46] apptainer works
[2026-04-12 06:33:46] Set ATHENA_PROC_NUMBER=3
[2026-04-12 06:33:46] Set ATHENA_CORE_NUMBER=3
[2026-04-12 06:33:46] Starting ATLAS job with PandaID=7087113078
[2026-04-12 06:33:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 07:57:09]  *** The last 200 lines of the pilot log: ***
[2026-04-12 07:57:09] 2026-04-12 05:56:15,805 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 07:57:09] 2026-04-12 05:56:15,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 07:57:09] 2026-04-12 05:56:15,806 | INFO     | did not find any defunct processes belonging to 1930236
[2026-04-12 07:57:09] 2026-04-12 05:56:15,807 | INFO     | did not find any defunct processes belonging to 1930236
[2026-04-12 07:57:09] 2026-04-12 05:56:15,807 | INFO     | Ready for new job
[2026-04-12 07:57:09] 2026-04-12 05:56:15,808 | INFO     | **************************************
[2026-04-12 07:57:09] 2026-04-12 05:56:15,808 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 07:57:09] 2026-04-12 05:56:15,808 | INFO     | **************************************
[2026-04-12 07:57:09] 2026-04-12 05:56:15,808 | INFO     | 
[2026-04-12 07:57:09] 2026-04-12 05:56:15,809 | INFO     | architecture information:
[2026-04-12 07:57:09] 2026-04-12 05:56:15,809 | INFO     | executing command: cat /etc/os-release
[2026-04-12 07:57:09] 2026-04-12 05:56:15,818 | INFO     | cat /etc/os-release:
[2026-04-12 07:57:09] NAME="CentOS Linux"
[2026-04-12 07:57:09] VERSION="7 (Core)"
[2026-04-12 07:57:09] ID="centos"
[2026-04-12 07:57:09] ID_LIKE="rhel fedora"
[2026-04-12 07:57:09] VERSION_ID="7"
[2026-04-12 07:57:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 07:57:09] ANSI_COLOR="0;31"
[2026-04-12 07:57:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 07:57:09] HOME_URL="https://www.centos.org/"
[2026-04-12 07:57:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 07:57:09] 
[2026-04-12 07:57:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 07:57:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 07:57:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 07:57:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 07:57:09] 
[2026-04-12 07:57:09] 2026-04-12 05:56:15,818 | INFO     | **************************************
[2026-04-12 07:57:09] 2026-04-12 05:56:16,320 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | INFO     | sufficient remaining disk space (378138525696 B)
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | INFO     | update_server=False
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 07:57:09] 2026-04-12 05:56:16,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 07:57:09] 2026-04-12 05:56:16,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-12 07:57:09] 2026-04-12 05:56:16,333 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 07:57:09] 2026-04-12 05:56:16,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 07:57:09] 2026-04-12 05:56:16,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 07:57:09] 2026-04-12 05:56:16,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 07:57:09] 2026-04-12 05:56:16,455 | INFO     | all job control threads have been joined
[2026-04-12 07:57:09] 2026-04-12 05:56:16,938 | INFO     | all data control threads have been joined
[2026-04-12 07:57:09] 2026-04-12 05:56:17,094 | INFO     | all payload control threads have been joined
[2026-04-12 07:57:09] 2026-04-12 05:56:17,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 07:57:09] 2026-04-12 05:56:17,190 | INFO     | aborting loop
[2026-04-12 07:57:09] 2026-04-12 05:56:17,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 07:57:09] 2026-04-12 05:56:17,338 | INFO     | [job] queue monitor thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,338 | INFO     | [job] retrieve thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,339 | INFO     | [payload] validate_post thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,389 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,404 | INFO     | [data] copytool_in thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,460 | INFO     | [job] control thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:17,943 | INFO     | [data] control thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,098 | INFO     | [payload] control thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,196 | INFO     | [job] job monitor thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,324 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,425 | INFO     | [payload] failed_post thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,698 | INFO     | [job] validate thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:18,793 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:19,338 | INFO     | [data] copytool_out thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:20,339 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:56:26,679 | INFO     | job.realtimelogging is not enabled
[2026-04-12 07:57:09] 2026-04-12 05:56:27,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 07:57:09] 2026-04-12 05:57:03,650 | INFO     | [monitor] cgroup control has ended
[2026-04-12 07:57:09] 2026-04-12 05:57:04,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844935939904)>', '<ExcThread(monitor, started 139843925436160)>']
[2026-04-12 07:57:09] 2026-04-12 05:57:05,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 07:57:09] 2026-04-12 05:57:05,586 | INFO     | [monitor] control thread has ended
[2026-04-12 07:57:09] 2026-04-12 05:57:09,681 | INFO     | all workflow threads have been joined
[2026-04-12 07:57:09] 2026-04-12 05:57:09,681 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 07:57:09] 2026-04-12 05:57:09,682 | INFO     | traces error code: 0
[2026-04-12 07:57:09] 2026-04-12 05:57:09,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 07:57:09] 2026-04-12 05:57:09,733 [wrapper] ==== pilot stdout END ====
[2026-04-12 07:57:09] 2026-04-12 05:57:09,736 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 07:57:09] 2026-04-12 05:57:09,738 [wrapper] pilotpid: 1925803
[2026-04-12 07:57:09] 2026-04-12 05:57:09,741 [wrapper] Pilot exit status: 0
[2026-04-12 07:57:09] 2026-04-12 05:57:09,749 [wrapper] pandaids: 7087113078
[2026-04-12 07:57:09] 2026-04-12 05:57:09,767 [wrapper] cleanup supervisor_pilot 1935400 1925804
[2026-04-12 07:57:09] 2026-04-12 05:57:09,770 [wrapper] Test setup, not cleaning
[2026-04-12 07:57:09] 2026-04-12 05:57:09,773 [wrapper] apfmon messages muted
[2026-04-12 07:57:09] 2026-04-12 05:57:09,775 [wrapper] ==== wrapper stdout END ====
[2026-04-12 07:57:09] 2026-04-12 05:57:09,778 [wrapper] ==== wrapper stderr END ====
[2026-04-12 07:57:09]  *** Error codes and diagnostics ***
[2026-04-12 07:57:09]     "exeErrorCode": 0,
[2026-04-12 07:57:09]     "pilotErrorCode": 0,
[2026-04-12 07:57:09]  *** Listing of results directory ***
[2026-04-12 07:57:09] total 413336
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc    644190 Apr 11 17:25 pilot3.tar.gz
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      5094 Apr 11 18:09 queuedata.json
[2026-04-12 07:57:09] -rwx------ 1 boinc boinc     36322 Apr 11 18:09 runpilot2-wrapper.sh
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc       100 Apr 12 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 07:57:09] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 06:33 run_atlas
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc       105 Apr 12 06:33 job.xml
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc 223543067 Apr 12 06:33 EVNT.49263189._001142.pool.root.1
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc    656931 Apr 12 06:33 input.tar.gz
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc     15665 Apr 12 06:33 start_atlas.sh
[2026-04-12 07:57:09] drwxrwx--x 2 boinc boinc      4096 Apr 12 06:33 shared
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc         0 Apr 12 06:33 boinc_setup_complete
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      6364 Apr 12 06:33 init_data.xml
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc         0 Apr 12 06:33 boinc_lockfile
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      2577 Apr 12 06:33 pandaJob.out
[2026-04-12 07:57:09] -rw------- 1 boinc boinc    997767 Apr 12 06:33 agis_schedconf.cvmfs.json
[2026-04-12 07:57:09] -rw------- 1 boinc boinc   1511579 Apr 12 06:33 agis_ddmendpoints.agis.ALL.json
[2026-04-12 07:57:09] -rw------- 1 boinc boinc       427 Apr 12 06:33 workernode_map.json
[2026-04-12 07:57:09] drwx------ 5 boinc boinc      4096 Apr 12 06:33 pilot3
[2026-04-12 07:57:09] -rw------- 1 boinc boinc        95 Apr 12 07:55 pilot_heartbeat.json
[2026-04-12 07:57:09] -rw------- 1 boinc boinc 194273121 Apr 12 07:55 HITS.49263191._049066.pool.root.1
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc       487 Apr 12 07:56 boinc_task_state.xml
[2026-04-12 07:57:09] -rw------- 1 boinc boinc      1015 Apr 12 07:56 memory_monitor_summary.json
[2026-04-12 07:57:09] -rw------- 1 boinc boinc    213890 Apr 12 07:56 log.49263191._049066.job.log.tgz.1
[2026-04-12 07:57:09] -rw------- 1 boinc boinc      6328 Apr 12 07:56 heartbeat_new.json
[2026-04-12 07:57:09] -rw------- 1 boinc boinc      6219 Apr 12 07:56 heartbeat.json
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      8192 Apr 12 07:57 boinc_mmap_file
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc        27 Apr 12 07:57 wrapper_checkpoint.txt
[2026-04-12 07:57:09] -rw------- 1 boinc boinc      4623 Apr 12 07:57 pilotlog.txt
[2026-04-12 07:57:09] -rw------- 1 boinc boinc    483542 Apr 12 07:57 log.49263191._049066.job.log.1
[2026-04-12 07:57:09] -rw------- 1 boinc boinc       357 Apr 12 07:57 output.list
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc       410 Apr 12 07:57 runtime_log
[2026-04-12 07:57:09] -rw------- 1 boinc boinc    716800 Apr 12 07:57 result.tar.gz
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      8538 Apr 12 07:57 runtime_log.err
[2026-04-12 07:57:09] -rw------- 1 boinc boinc       661 Apr 12 07:57 72559e981086.diag
[2026-04-12 07:57:09] -rw-r--r-- 1 boinc boinc      9769 Apr 12 07:57 stderr.txt
[2026-04-12 07:57:09] HITS file was successfully produced:
[2026-04-12 07:57:09] -rw------- 1 boinc boinc 194273121 Apr 12 07:55 shared/HITS.pool.root.1
[2026-04-12 07:57:09]  *** Contents of shared directory: ***
[2026-04-12 07:57:09] total 409388
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc 223543067 Apr 12 06:33 ATLAS.root_0
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc    656931 Apr 12 06:33 input.tar.gz
[2026-04-12 07:57:09] -rw-r--r-- 2 boinc boinc     15665 Apr 12 06:33 start_atlas.sh
[2026-04-12 07:57:09] -rw------- 1 boinc boinc 194273121 Apr 12 07:55 HITS.pool.root.1
[2026-04-12 07:57:09] -rw------- 1 boinc boinc    716800 Apr 12 07:57 result.tar.gz
07:57:11 (1921719): run_atlas exited; CPU time 13840.518084
07:57:11 (1921719): called boinc_finish(0)

</stderr_txt>
]]>

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