Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:44:38 (6597): wrapper (7.7.26015): starting
19:44:38 (6597): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 19:44:38] Arguments: --nthreads 8
[2026-04-11 19:44:38] Threads: 8
[2026-04-11 19:44:38] Checking for CVMFS
[2026-04-11 19:44:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 19:44:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 19:44:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 19:44:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 19:44:38] 2.11.0.0 8644 261819 120500 158351 3 188 2126656 4096001 2689 130560 7 29108172 99.696 18609190 408 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-11 19:44:38] CVMFS is ok
[2026-04-11 19:44:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 19:44:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 19:44:38] Further information can be found at the LHC@home message board.
[2026-04-11 19:44:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 19:44:38] Checking for apptainer binary...
[2026-04-11 19:44:38] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-11 19:44:38] apptainer is not installed, using version from CVMFS
[2026-04-11 19:44:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 19:44:39] WARNING: Environment variable TMPDIR already has value [/tmp/job_11490088/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node184
[2026-04-11 19:44:39] apptainer works
[2026-04-11 19:44:39] Set ATHENA_PROC_NUMBER=8
[2026-04-11 19:44:39] Set ATHENA_CORE_NUMBER=8
[2026-04-11 19:44:39] Starting ATLAS job with PandaID=7087027453
[2026-04-11 19:44:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11490088/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 20:31:56]  *** The last 200 lines of the pilot log: ***
[2026-04-11 20:31:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-11 20:31:56]  is_altstaged=None
[2026-04-11 20:31:56]  is_tar=False
[2026-04-11 20:31:56]  lfn=log.49263191._047842.job.log.tgz.1
[2026-04-11 20:31:56]  mtime=0
[2026-04-11 20:31:56]  protocol_id=None
[2026-04-11 20:31:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-11 20:31:56]  replicas=None
[2026-04-11 20:31:56]  scope=mc23_13p6TeV
[2026-04-11 20:31:56]  status=None
[2026-04-11 20:31:56]  status_code=0
[2026-04-11 20:31:56]  storage_token=
[2026-04-11 20:31:56]  surl=/tmp/job_11490088/atlas/pilot/slots/0/PanDA_Pilot-7087027453/log.49263191._047842.job.log.tgz.1
[2026-04-11 20:31:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/0e/log.49263191._047842.job.log.tgz.1
[2026-04-11 20:31:56]  workdir=None
[2026-04-11 20:31:56] ]
[2026-04-11 20:31:56] 2026-04-11 18:31:01,468 | INFO     | transferring file log.49263191._047842.job.log.tgz.1 from /tmp/job_11490088/atlas/pilot/slots/0/PanDA_Pilot-7087027453/log.49263191._047842.job.log.tgz.1 to /tmp/j
[2026-04-11 20:31:56] 2026-04-11 18:31:01,469 | INFO     | executing command: /usr/bin/env mv /tmp/job_11490088/atlas/pilot/slots/0/PanDA_Pilot-7087027453/log.49263191._047842.job.log.tgz.1 /tmp/job_11490088/atlas/pilot/sl
[2026-04-11 20:31:56] 2026-04-11 18:31:01,477 | INFO     | adding to output.list: log.49263191._047842.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/0e/log.49263191._047842.job.log.tg
[2026-04-11 20:31:56] 2026-04-11 18:31:01,477 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-11 20:31:56] 2026-04-11 18:31:01,477 | INFO     | summary of transferred files:
[2026-04-11 20:31:56] 2026-04-11 18:31:01,477 | INFO     |  -- lfn=log.49263191._047842.job.log.tgz.1, status_code=0, status=transferred
[2026-04-11 20:31:56] 2026-04-11 18:31:01,477 | INFO     | stage-out finished correctly
[2026-04-11 20:31:56] 2026-04-11 18:31:01,593 | INFO     | number of running child processes to parent process 15218: 1
[2026-04-11 20:31:56] 2026-04-11 18:31:01,593 | INFO     | maximum number of monitored processes: 6
[2026-04-11 20:31:56] 2026-04-11 18:31:04,096 | INFO     | monitor loop #211: job 0:7087027453 is in state 'finished'
[2026-04-11 20:31:56] 2026-04-11 18:31:04,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 20:31:56] 2026-04-11 18:31:04,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 20:31:56] 2026-04-11 18:31:06,599 | INFO     | monitor loop #212: job 0:7087027453 is in state 'finished'
[2026-04-11 20:31:56] 2026-04-11 18:31:06,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,622 | INFO     | job 7087027453 has state=finished
[2026-04-11 20:31:56] 2026-04-11 18:31:06,622 | INFO     | preparing for final server update for job 7087027453 in state='finished'
[2026-04-11 20:31:56] 2026-04-11 18:31:06,622 | INFO     | reading metadata from: /tmp/job_11490088/atlas/pilot/slots/0/PanDA_Pilot-7087027453/jobReport.json
[2026-04-11 20:31:56] 2026-04-11 18:31:06,623 | INFO     | added worker_node to metadata from /tmp/job_11490088/atlas/pilot/slots/0/workernode_map.json
[2026-04-11 20:31:56] 2026-04-11 18:31:06,623 | INFO     | this job has now completed (state=finished)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,623 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,623 | INFO     | log transfer has been attempted: DONE
[2026-04-11 20:31:56] 2026-04-11 18:31:06,623 | INFO     | job 7087027453 has finished - writing final server update
[2026-04-11 20:31:56] 2026-04-11 18:31:06,624 | INFO     | total number of processed events: 400 (read)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,642 | INFO     | using path: /tmp/job_11490088/atlas/pilot/slots/0/PanDA_Pilot-7087027453/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,642 | INFO     | extracted standard info from prmon json
[2026-04-11 20:31:56] 2026-04-11 18:31:06,642 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 20:31:56] 2026-04-11 18:31:06,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 20:31:56] 2026-04-11 18:31:06,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | fitting pss+swap vs Time
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | sum of square deviations: 18381740.0
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | sum of deviations: -775164209.9999999
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | mean x (centered): 0.0
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | mean y: 2546941.3333333335
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | intersect: 2546941.3333333335
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | chi2: 0.0035158861467492887
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | current memory leak: -42.17 B/s (using 39 data points, chi2=0.00)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,643 | INFO     | could have reported an average CPU frequency of 2517 MHz (5 samples)
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | ..............................
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . Timing measurements:
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . get job = 0 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . initial setup = 2 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . payload setup = 3 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . stage-in = 0 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . payload execution = 2757 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . stage-out = 0 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | . log creation = 0 s
[2026-04-11 20:31:56] 2026-04-11 18:31:06,644 | INFO     | ..............................
[2026-04-11 20:31:56] 2026-04-11 18:31:07,187 | INFO     | 
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | job summary report
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | --------------------------------------------------
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | PanDA job id: 7087027453
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | task id: 49263191
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | errors: (none)
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | pilot state: finished 
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | transexitcode: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | exeerrorcode: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | exeerrordiag: 
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | exitcode: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | exitmsg: OK
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | cpuconsumptiontime: 19524 s
[2026-04-11 20:31:56] 2026-04-11 18:31:07,188 | INFO     | nevents: 400
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | neventsw: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | pid: 15218
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | pgrp: 15218
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | corecount: 8
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | event service: False
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | sizes: {0: 2281598, 10: 2281598, 2765: 2316068, 2768: 2316068, 2770: 2316294}
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | --------------------------------------------------
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | 
[2026-04-11 20:31:56] 2026-04-11 18:31:07,189 | INFO     | executing command: ls -lF /tmp/job_11490088/atlas/pilot/slots/0
[2026-04-11 20:31:56] 2026-04-11 18:31:07,198 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,198 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,198 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,198 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | job 7087027453 has completed (purged errors)
[2026-04-11 20:31:56] 2026-04-11 18:31:07,199 | INFO     | overall cleanup function is called
[2026-04-11 20:31:56] 2026-04-11 18:31:08,205 | INFO     | --- collectZombieJob: --- 10, [15218]
[2026-04-11 20:31:56] 2026-04-11 18:31:08,205 | INFO     | zombie collector waiting for pid 15218
[2026-04-11 20:31:56] 2026-04-11 18:31:08,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 20:31:56] 2026-04-11 18:31:08,205 | INFO     | collected zombie processes
[2026-04-11 20:31:56] 2026-04-11 18:31:08,206 | INFO     | will attempt to kill all subprocesses of pid=15218
[2026-04-11 20:31:56] 2026-04-11 18:31:08,305 | INFO     | process IDs to be killed: [15218] (in reverse order)
[2026-04-11 20:31:56] 2026-04-11 18:31:08,340 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 20:31:56] 2026-04-11 18:31:08,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 20:31:56] 2026-04-11 18:31:08,344 | INFO     | did not find any defunct processes belonging to 15218
[2026-04-11 20:31:56] 2026-04-11 18:31:08,347 | INFO     | did not find any defunct processes belonging to 15218
[2026-04-11 20:31:56] 2026-04-11 18:31:08,347 | INFO     | Ready for new job
[2026-04-11 20:31:56] 2026-04-11 18:31:08,348 | INFO     | **************************************
[2026-04-11 20:31:56] 2026-04-11 18:31:08,348 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 20:31:56] 2026-04-11 18:31:08,348 | INFO     | **************************************
[2026-04-11 20:31:56] 2026-04-11 18:31:08,348 | INFO     | 
[2026-04-11 20:31:56] 2026-04-11 18:31:08,362 | INFO     | architecture information:
[2026-04-11 20:31:56] 2026-04-11 18:31:08,362 | INFO     | executing command: cat /etc/os-release
[2026-04-11 20:31:56] 2026-04-11 18:31:08,368 | INFO     | cat /etc/os-release:
[2026-04-11 20:31:56] NAME="CentOS Linux"
[2026-04-11 20:31:56] VERSION="7 (Core)"
[2026-04-11 20:31:56] ID="centos"
[2026-04-11 20:31:56] ID_LIKE="rhel fedora"
[2026-04-11 20:31:56] VERSION_ID="7"
[2026-04-11 20:31:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 20:31:56] ANSI_COLOR="0;31"
[2026-04-11 20:31:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 20:31:56] HOME_URL="https://www.centos.org/"
[2026-04-11 20:31:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 20:31:56] 
[2026-04-11 20:31:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 20:31:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 20:31:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 20:31:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 20:31:56] 
[2026-04-11 20:31:56] 2026-04-11 18:31:08,368 | INFO     | **************************************
[2026-04-11 20:31:56] 2026-04-11 18:31:08,871 | INFO     | executing command: df -mP /tmp/job_11490088/atlas/pilot/slots/0
[2026-04-11 20:31:56] 2026-04-11 18:31:08,877 | INFO     | sufficient remaining disk space (226449424384 B)
[2026-04-11 20:31:56] 2026-04-11 18:31:08,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 20:31:56] 2026-04-11 18:31:08,877 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 20:31:56] 2026-04-11 18:31:08,877 | INFO     | update_server=False
[2026-04-11 20:31:56] 2026-04-11 18:31:08,877 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 20:31:56] 2026-04-11 18:31:09,047 | INFO     | all job control threads have been joined
[2026-04-11 20:31:56] 2026-04-11 18:31:09,101 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 20:31:56] 2026-04-11 18:31:09,102 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 20:31:56] 2026-04-11 18:31:09,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 20:31:56] 2026-04-11 18:31:09,102 | INFO     | will abort loop
[2026-04-11 20:31:56] 2026-04-11 18:31:09,327 | INFO     | all payload control threads have been joined
[2026-04-11 20:31:56] 2026-04-11 18:31:09,468 | INFO     | all data control threads have been joined
[2026-04-11 20:31:56] 2026-04-11 18:31:09,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 20:31:56] 2026-04-11 18:31:09,882 | INFO     | [job] retrieve thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,021 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,041 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,052 | INFO     | [job] control thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,076 | INFO     | [payload] validate_post thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,107 | INFO     | [job] job monitor thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,133 | INFO     | [data] copytool_in thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,176 | INFO     | [payload] failed_post thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,332 | INFO     | [payload] control thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,473 | INFO     | [data] control thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:10,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 20:31:56] 2026-04-11 18:31:11,038 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:11,383 | INFO     | [job] validate thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:11,543 | INFO     | [data] copytool_out thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:11,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 20:31:56] 2026-04-11 18:31:12,707 | INFO     | [job] queue monitor thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:14,536 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:19,814 | INFO     | job.realtimelogging is not enabled
[2026-04-11 20:31:56] 2026-04-11 18:31:20,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 20:31:56] 2026-04-11 18:31:39,620 | INFO     | PID=10649 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-11 20:31:56] 2026-04-11 18:31:39,620 | INFO     | .. there are 3 such processes running
[2026-04-11 20:31:56] 2026-04-11 18:31:39,620 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 20:31:56] 2026-04-11 18:31:39,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 20:31:56] 2026-04-11 18:31:39,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 20:31:56] 2026-04-11 18:31:49,843 | INFO     | [monitor] cgroup control has ended
[2026-04-11 20:31:56] 2026-04-11 18:31:50,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061236992)>']
[2026-04-11 20:31:56] 2026-04-11 18:31:51,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 20:31:56] 2026-04-11 18:31:51,680 | INFO     | [monitor] control thread has ended
[2026-04-11 20:31:56] 2026-04-11 18:31:55,877 | INFO     | all workflow threads have been joined
[2026-04-11 20:31:56] 2026-04-11 18:31:55,877 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 20:31:56] 2026-04-11 18:31:55,877 | INFO     | traces error code: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:55,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 20:31:56] 2026-04-11 18:31:55,928 [wrapper] ==== pilot stdout END ====
[2026-04-11 20:31:56] 2026-04-11 18:31:55,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 20:31:56] 2026-04-11 18:31:55,931 [wrapper] pilotpid: 10649
[2026-04-11 20:31:56] 2026-04-11 18:31:55,932 [wrapper] Pilot exit status: 0
[2026-04-11 20:31:56] 2026-04-11 18:31:55,935 [wrapper] pandaids: 7087027453
[2026-04-11 20:31:56] 2026-04-11 18:31:55,957 [wrapper] cleanup supervisor_pilot 23025 10650
[2026-04-11 20:31:56] 2026-04-11 18:31:55,958 [wrapper] Test setup, not cleaning
[2026-04-11 20:31:56] 2026-04-11 18:31:55,959 [wrapper] apfmon messages muted
[2026-04-11 20:31:56] 2026-04-11 18:31:55,960 [wrapper] ==== wrapper stdout END ====
[2026-04-11 20:31:56] 2026-04-11 18:31:55,961 [wrapper] ==== wrapper stderr END ====
[2026-04-11 20:31:56]  *** Error codes and diagnostics ***
[2026-04-11 20:31:56]     "exeErrorCode": 0,
[2026-04-11 20:31:56]     "pilotErrorCode": 0,
[2026-04-11 20:31:56]  *** Listing of results directory ***
[2026-04-11 20:31:56] total 413816
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    644190 Apr 11 14:50 pilot3.tar.gz
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      5094 Apr 11 15:17 queuedata.json
[2026-04-11 20:31:56] -rwx------ 1 mf493845 unix-user     36322 Apr 11 15:17 runpilot2-wrapper.sh
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       100 Apr 11 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 20:31:56] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 11 18:47 run_atlas
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       105 Apr 11 18:47 job.xml
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 11 19:44 start_atlas.sh
[2026-04-11 20:31:56] drwxrwx--x 2 mf493845 unix-user       100 Apr 11 19:44 shared
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user    656931 Apr 11 19:44 input.tar.gz
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user 225214809 Apr 11 19:44 EVNT.49263189._001094.pool.root.1
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user         0 Apr 11 19:44 boinc_setup_complete
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      6306 Apr 11 19:44 init_data.xml
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      8192 Apr 11 19:44 boinc_mmap_file
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user         0 Apr 11 19:44 boinc_lockfile
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      2578 Apr 11 19:44 pandaJob.out
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    997828 Apr 11 19:44 agis_schedconf.cvmfs.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user   1511579 Apr 11 19:44 agis_ddmendpoints.agis.ALL.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       416 Apr 11 19:44 workernode_map.json
[2026-04-11 20:31:56] drwx------ 5 mf493845 unix-user       480 Apr 11 19:44 pilot3
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user 193283993 Apr 11 20:30 HITS.49263191._047842.pool.root.1
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      1015 Apr 11 20:30 memory_monitor_summary.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    298943 Apr 11 20:31 log.49263191._047842.job.log.tgz.1
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      6331 Apr 11 20:31 heartbeat_new.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      6221 Apr 11 20:31 heartbeat.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user        95 Apr 11 20:31 pilot_heartbeat.json
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      5088 Apr 11 20:31 pilotlog.txt
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    310771 Apr 11 20:31 log.49263191._047842.job.log.1
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       357 Apr 11 20:31 output.list
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       410 Apr 11 20:31 runtime_log
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    624640 Apr 11 20:31 result.tar.gz
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user      8841 Apr 11 20:31 runtime_log.err
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user       641 Apr 11 20:31 49eecdcd9337.diag
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user     21816 Apr 11 20:31 stderr.txt
[2026-04-11 20:31:56] HITS file was successfully produced:
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user 193283993 Apr 11 20:30 shared/HITS.pool.root.1
[2026-04-11 20:31:56]  *** Contents of shared directory: ***
[2026-04-11 20:31:56] total 409968
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 11 19:44 start_atlas.sh
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user    656931 Apr 11 19:44 input.tar.gz
[2026-04-11 20:31:56] -rw-r--r-- 2 mf493845 unix-user 225214809 Apr 11 19:44 ATLAS.root_0
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user 193283993 Apr 11 20:30 HITS.pool.root.1
[2026-04-11 20:31:56] -rw------- 1 mf493845 unix-user    624640 Apr 11 20:31 result.tar.gz
20:31:57 (6597): run_atlas exited; CPU time 19560.962992
20:31:57 (6597): called boinc_finish(0)

</stderr_txt>
]]>

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