Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:35:42 (542748): wrapper (7.7.26015): starting
21:35:42 (542748): wrapper: running run_atlas (--nthreads 12)
[2026-04-11 21:35:42] Arguments: --nthreads 12
[2026-04-11 21:35:42] Threads: 12
[2026-04-11 21:35:42] Checking for CVMFS
[2026-04-11 21:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 21:35:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 21:35:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 21:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 21:35:45] 2.13.3.0 9262 226543 190516 158362 2 210 21225426 32935936 26094 16776704 0 993107006 99.694 768670019 31866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-11 21:35:45] CVMFS is ok
[2026-04-11 21:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 21:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 21:35:45] Further information can be found at the LHC@home message board.
[2026-04-11 21:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 21:35:45] Checking for apptainer binary...
[2026-04-11 21:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 21:35:45] Running /usr/bin/apptainer --version
[2026-04-11 21:35:45] apptainer version 1.4.5-2.el9
[2026-04-11 21:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 21:35:46] c-8-32.aglt2.org
[2026-04-11 21:35:46] apptainer works
[2026-04-11 21:35:46] Set ATHENA_PROC_NUMBER=12
[2026-04-11 21:35:46] Set ATHENA_CORE_NUMBER=12
[2026-04-11 21:35:46] Starting ATLAS job with PandaID=7087054849
[2026-04-11 21:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 03:34:28]  *** The last 200 lines of the pilot log: ***
[2026-04-13 03:34:28] 2026-04-13 07:32:48,907 | INFO     | monitor loop #3145: job 0:7087054849 is in state 'finished'
[2026-04-13 03:34:28] 2026-04-13 07:32:48,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 03:34:28] 2026-04-13 07:32:49,568 | INFO     | sum of deviations: -349108228930.78406
[2026-04-13 03:34:28] 2026-04-13 07:32:49,568 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:32:49,568 | INFO     | mean y: 2671122.444570779
[2026-04-13 03:34:28] 2026-04-13 07:32:49,568 | INFO     | intersect: 2671122.444570779
[2026-04-13 03:34:28] 2026-04-13 07:32:49,623 | INFO     | chi2: 7.933622031714736
[2026-04-13 03:34:28] 2026-04-13 07:32:49,623 | INFO     | current chi2=7.933622031714736 (change=35.60454091309798 %)
[2026-04-13 03:34:28] 2026-04-13 07:32:49,668 | INFO     | sum of square deviations: 1673281770004.8364
[2026-04-13 03:34:28] 2026-04-13 07:32:51,621 | INFO     | sum of deviations: 278251080358.8541
[2026-04-13 03:34:28] 2026-04-13 07:32:51,622 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:32:51,622 | INFO     | mean y: 2677789.011972634
[2026-04-13 03:34:28] 2026-04-13 07:32:51,622 | INFO     | intersect: 2677789.011972634
[2026-04-13 03:34:28] 2026-04-13 07:32:51,718 | INFO     | chi2: 4.049464929536792
[2026-04-13 03:34:28] 2026-04-13 07:32:51,718 | INFO     | current chi2=4.049464929536792 (change=48.95818185755492 %)
[2026-04-13 03:34:28] 2026-04-13 07:32:51,776 | INFO     | sum of square deviations: 1659013323776.077
[2026-04-13 03:34:28] 2026-04-13 07:32:52,544 | INFO     | monitor loop #3146: job 0:7087054849 is in state 'finished'
[2026-04-13 03:34:28] 2026-04-13 07:32:52,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 03:34:28] 2026-04-13 07:32:54,394 | INFO     | sum of deviations: 517699325708.64197
[2026-04-13 03:34:28] 2026-04-13 07:32:54,394 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:32:54,394 | INFO     | mean y: 2680343.6958261863
[2026-04-13 03:34:28] 2026-04-13 07:32:54,394 | INFO     | intersect: 2680343.6958261863
[2026-04-13 03:34:28] 2026-04-13 07:32:54,401 | INFO     | chi2: 2.571956852854526
[2026-04-13 03:34:28] 2026-04-13 07:32:54,401 | INFO     | current chi2=2.571956852854526 (change=36.4865013623238 %)
[2026-04-13 03:34:28] 2026-04-13 07:32:54,403 | INFO     | sum of square deviations: 1644826014653.9358
[2026-04-13 03:34:28] 2026-04-13 07:32:55,223 | INFO     | monitor loop #3147: job 0:7087054849 is in state 'finished'
[2026-04-13 03:34:28] 2026-04-13 07:32:55,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 03:34:28] 2026-04-13 07:32:56,496 | INFO     | sum of deviations: 514808262944.3098
[2026-04-13 03:34:28] 2026-04-13 07:32:56,496 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:32:56,496 | INFO     | mean y: 2680312.6198394494
[2026-04-13 03:34:28] 2026-04-13 07:32:56,496 | INFO     | intersect: 2680312.6198394494
[2026-04-13 03:34:28] 2026-04-13 07:32:56,591 | INFO     | chi2: 2.571996908309525
[2026-04-13 03:34:28] 2026-04-13 07:32:56,591 | INFO     | current chi2=2.571996908309525 (change=-0.0015573921838782441 %)
[2026-04-13 03:34:28] 2026-04-13 07:32:56,591 | INFO     | right removable region: 1743
[2026-04-13 03:34:28] 2026-04-13 07:32:56,653 | INFO     | sum of square deviations: 1687630589407.6343
[2026-04-13 03:34:28] 2026-04-13 07:32:58,176 | INFO     | monitor loop #3148: job 0:7087054849 is in state 'finished'
[2026-04-13 03:34:28] 2026-04-13 07:32:58,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 03:34:28] 2026-04-13 07:32:59,894 | INFO     | sum of deviations: -1435674464126.8604
[2026-04-13 03:34:28] 2026-04-13 07:32:59,894 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:32:59,895 | INFO     | mean y: 2668617.588971006
[2026-04-13 03:34:28] 2026-04-13 07:32:59,895 | INFO     | intersect: 2668617.588971006
[2026-04-13 03:34:28] 2026-04-13 07:32:59,949 | INFO     | chi2: 10.19268582018917
[2026-04-13 03:34:28] 2026-04-13 07:32:59,949 | INFO     | current chi2=10.19268582018917 (change=17.268218715761662 %)
[2026-04-13 03:34:28] 2026-04-13 07:32:59,949 | INFO     | left removable region: 5
[2026-04-13 03:34:28] 2026-04-13 07:33:00,007 | INFO     | sum of square deviations: 1627907580985.9937
[2026-04-13 03:34:28] 2026-04-13 07:33:01,373 | INFO     | monitor loop #3149: job 0:7087054849 is in state 'finished'
[2026-04-13 03:34:28] 2026-04-13 07:33:01,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 03:34:28] 2026-04-13 07:33:01,873 | INFO     | sum of deviations: 90057459004.12038
[2026-04-13 03:34:28] 2026-04-13 07:33:01,873 | INFO     | mean x (centered): 0.0
[2026-04-13 03:34:28] 2026-04-13 07:33:01,873 | INFO     | mean y: 2684893.687571922
[2026-04-13 03:34:28] 2026-04-13 07:33:01,873 | INFO     | intersect: 2684893.687571922
[2026-04-13 03:34:28] 2026-04-13 07:33:01,920 | INFO     | chi2: 0.398734280106692
[2026-04-13 03:34:28] 2026-04-13 07:33:01,920 | INFO     | current memory leak: 0.06 B/s (using 1738 data points, chi2=0.40)
[2026-04-13 03:34:28] 2026-04-13 07:33:01,922 | INFO     | could have reported an average CPU frequency of 2586 MHz (63 samples)
[2026-04-13 03:34:28] 2026-04-13 07:33:01,922 | INFO     | ..............................
[2026-04-13 03:34:28] 2026-04-13 07:33:01,922 | INFO     | . Timing measurements:
[2026-04-13 03:34:28] 2026-04-13 07:33:01,922 | INFO     | . get job = 0 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,922 | INFO     | . initial setup = 29 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | . payload setup = 48 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | . stage-in = 0 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | . payload execution = 107610 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | . stage-out = 33 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | . log creation = 8 s
[2026-04-13 03:34:28] 2026-04-13 07:33:01,923 | INFO     | ..............................
[2026-04-13 03:34:28] 2026-04-13 07:33:03,158 | INFO     | 
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | job summary report
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | --------------------------------------------------
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | PanDA job id: 7087054849
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | task id: 49263208
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | errors: (none)
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 03:34:28] 2026-04-13 07:33:03,159 | INFO     | pilot state: finished 
[2026-04-13 03:34:28] 2026-04-13 07:33:03,163 | INFO     | transexitcode: 0
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | exeerrorcode: 0
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | exeerrordiag: 
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | exitcode: 0
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | exitmsg: OK
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | cpuconsumptiontime: 54716 s
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | nevents: 400
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | neventsw: 0
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | pid: 557005
[2026-04-13 03:34:28] 2026-04-13 07:33:03,164 | INFO     | pgrp: 557005
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | corecount: 12
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | event service: False
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | sizes: {0: 2279611, 1: 2279695, 2: 2281524, 13: 2281524, 107667: 2345680, 107672: 2345679, 107708: 2354861, 107709: 2354917, 107727: 2355111}
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | --------------------------------------------------
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | 
[2026-04-13 03:34:28] 2026-04-13 07:33:03,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-13 03:34:28] 2026-04-13 07:33:03,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 03:34:28] 2026-04-13 07:33:03,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,445 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 03:34:28] 2026-04-13 07:33:03,445 | INFO     | job 7087054849 has completed (purged errors)
[2026-04-13 03:34:28] 2026-04-13 07:33:03,445 | INFO     | overall cleanup function is called
[2026-04-13 03:34:28] 2026-04-13 07:33:03,805 | INFO     | PID=548182 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-13 03:34:28] 2026-04-13 07:33:03,806 | INFO     | .. there are 45 such processes running
[2026-04-13 03:34:28] 2026-04-13 07:33:04,495 | INFO     | --- collectZombieJob: --- 10, [557005]
[2026-04-13 03:34:28] 2026-04-13 07:33:04,496 | INFO     | zombie collector waiting for pid 557005
[2026-04-13 03:34:28] 2026-04-13 07:33:04,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 03:34:28] 2026-04-13 07:33:04,496 | INFO     | collected zombie processes
[2026-04-13 03:34:28] 2026-04-13 07:33:04,496 | INFO     | will attempt to kill all subprocesses of pid=557005
[2026-04-13 03:34:28] 2026-04-13 07:33:15,339 | INFO     | process IDs to be killed: [557005] (in reverse order)
[2026-04-13 03:34:28] 2026-04-13 07:33:15,939 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 03:34:28] 2026-04-13 07:33:15,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 03:34:28] 2026-04-13 07:33:16,164 | INFO     | did not find any defunct processes belonging to 557005
[2026-04-13 03:34:28] 2026-04-13 07:33:16,313 | INFO     | did not find any defunct processes belonging to 557005
[2026-04-13 03:34:28] 2026-04-13 07:33:16,313 | INFO     | Ready for new job
[2026-04-13 03:34:28] 2026-04-13 07:33:16,349 | INFO     | **************************************
[2026-04-13 03:34:28] 2026-04-13 07:33:16,349 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 03:34:28] 2026-04-13 07:33:16,350 | INFO     | **************************************
[2026-04-13 03:34:28] 2026-04-13 07:33:16,350 | INFO     | 
[2026-04-13 03:34:28] 2026-04-13 07:33:16,376 | INFO     | architecture information:
[2026-04-13 03:34:28] 2026-04-13 07:33:16,443 | INFO     | executing command: cat /etc/os-release
[2026-04-13 03:34:28] 2026-04-13 07:33:17,093 | INFO     | cat /etc/os-release:
[2026-04-13 03:34:28] NAME="CentOS Linux"
[2026-04-13 03:34:28] VERSION="7 (Core)"
[2026-04-13 03:34:28] ID="centos"
[2026-04-13 03:34:28] ID_LIKE="rhel fedora"
[2026-04-13 03:34:28] VERSION_ID="7"
[2026-04-13 03:34:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 03:34:28] ANSI_COLOR="0;31"
[2026-04-13 03:34:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 03:34:28] HOME_URL="https://www.centos.org/"
[2026-04-13 03:34:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 03:34:28] 
[2026-04-13 03:34:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 03:34:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 03:34:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 03:34:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 03:34:28] 
[2026-04-13 03:34:28] 2026-04-13 07:33:17,093 | INFO     | **************************************
[2026-04-13 03:34:28] 2026-04-13 07:33:17,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-13 03:34:28] 2026-04-13 07:33:18,407 | INFO     | sufficient remaining disk space (74226597888 B)
[2026-04-13 03:34:28] 2026-04-13 07:33:18,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 03:34:28] 2026-04-13 07:33:18,408 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 03:34:28] 2026-04-13 07:33:18,408 | INFO     | update_server=False
[2026-04-13 03:34:28] 2026-04-13 07:33:18,408 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 03:34:28] 2026-04-13 07:33:18,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 03:34:28] 2026-04-13 07:33:18,410 | INFO     | aborting loop
[2026-04-13 03:34:28] 2026-04-13 07:33:18,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 03:34:28] 2026-04-13 07:33:18,981 | INFO     | all payload control threads have been joined
[2026-04-13 03:34:28] 2026-04-13 07:33:19,354 | INFO     | all data control threads have been joined
[2026-04-13 03:34:28] 2026-04-13 07:33:19,414 | INFO     | [job] retrieve thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:19,415 | INFO     | [job] job monitor thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:19,508 | INFO     | all job control threads have been joined
[2026-04-13 03:34:28] 2026-04-13 07:33:19,509 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:19,611 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,057 | INFO     | [payload] control thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,227 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,288 | INFO     | [payload] failed_post thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,361 | INFO     | [data] control thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,516 | INFO     | [job] control thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,692 | INFO     | [data] copytool_in thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,753 | INFO     | [data] copytool_out thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,753 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,874 | INFO     | [job] validate thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:20,980 | INFO     | [payload] validate_post thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:21,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 03:34:28] 2026-04-13 07:33:21,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 03:34:28] 2026-04-13 07:33:22,228 | INFO     | [job] queue monitor thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:25,793 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 03:34:28] 2026-04-13 07:33:33,369 | INFO     | [monitor] cgroup control has ended
[2026-04-13 03:34:28] 2026-04-13 07:33:34,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705852745536)>', '<ExcThread(monitor, started 139705571358464)>']
[2026-04-13 03:34:28] 2026-04-13 07:33:40,027 | INFO     | all workflow threads have been joined
[2026-04-13 03:34:28] 2026-04-13 07:33:40,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 03:34:28] 2026-04-13 07:33:40,083 | INFO     | traces error code: 0
[2026-04-13 03:34:28] 2026-04-13 07:33:40,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 03:34:28] 2026-04-13 07:34:13,189 | INFO     | PID=548182 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-13 03:34:28] 2026-04-13 07:34:13,513 | INFO     | .. there are 45 such processes running
[2026-04-13 03:34:28] 2026-04-13 07:34:13,514 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 03:34:28] 2026-04-13 07:34:13,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 03:34:28] 2026-04-13 07:34:13,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 03:34:28] 2026-04-13 07:34:13,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 03:34:28] 2026-04-13 07:34:13,514 | INFO     | [monitor] control thread has ended
[2026-04-13 03:34:28] 2026-04-13 07:34:25,415 [wrapper] ==== pilot stdout END ====
[2026-04-13 03:34:28] 2026-04-13 07:34:25,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 03:34:28] 2026-04-13 07:34:25,576 [wrapper] pilotpid: 548182
[2026-04-13 03:34:28] 2026-04-13 07:34:25,680 [wrapper] Pilot exit status: 0
[2026-04-13 03:34:28] 2026-04-13 07:34:26,178 [wrapper] pandaids: 7087054849
[2026-04-13 03:34:28] 2026-04-13 07:34:26,436 [wrapper] cleanup supervisor_pilot 2435570 548183
[2026-04-13 03:34:28] 2026-04-13 07:34:26,474 [wrapper] Test setup, not cleaning
[2026-04-13 03:34:28] 2026-04-13 07:34:26,598 [wrapper] apfmon messages muted
[2026-04-13 03:34:28] 2026-04-13 07:34:26,634 [wrapper] ==== wrapper stdout END ====
[2026-04-13 03:34:28] 2026-04-13 07:34:26,830 [wrapper] ==== wrapper stderr END ====
[2026-04-13 03:34:28]  *** Error codes and diagnostics ***
[2026-04-13 03:34:28]     "exeErrorCode": 0,
[2026-04-13 03:34:28]     "pilotErrorCode": 0,
[2026-04-13 03:34:28]  *** Listing of results directory ***
[2026-04-13 03:34:28] total 426260
[2026-04-13 03:34:28] -rwx------. 1 boincer umatlas     36322 Apr 11 10:02 runpilot2-wrapper.sh
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas    644190 Apr 11 10:08 pilot3.tar.gz
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas      5094 Apr 11 10:08 queuedata.json
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas       100 Apr 11 21:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 03:34:28] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 11 21:35 run_atlas
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas       105 Apr 11 21:35 job.xml
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas 222329681 Apr 11 21:35 EVNT.49263206._000932.pool.root.1
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas     15665 Apr 11 21:35 start_atlas.sh
[2026-04-13 03:34:28] drwxrwx--x. 2 boincer umatlas      4096 Apr 11 21:35 shared
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas    656933 Apr 11 21:35 input.tar.gz
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas         0 Apr 11 21:35 boinc_lockfile
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas      2575 Apr 11 21:35 pandaJob.out
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas        57 Apr 11 21:35 setup.sh.local
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas    997775 Apr 11 21:36 agis_schedconf.cvmfs.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas       433 Apr 11 21:37 workernode_map.json
[2026-04-13 03:34:28] drwx------. 5 boincer umatlas      4096 Apr 11 21:37 pilot3
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas 197752431 Apr 13 03:18 HITS.49263208._036695.pool.root.1
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas       488 Apr 13 03:19 boinc_task_state.xml
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas      6625 Apr 13 03:31 init_data.xml
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas      1064 Apr 13 03:31 memory_monitor_summary.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas   1511579 Apr 13 03:32 agis_ddmendpoints.agis.ALL.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas    966174 Apr 13 03:32 log.49263208._036695.job.log.tgz.1
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas      6448 Apr 13 03:33 heartbeat_new.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas      6339 Apr 13 03:33 heartbeat.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas        96 Apr 13 03:34 pilot_heartbeat.json
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas       822 Apr 13 03:34 pilotlog.txt
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas      8192 Apr 13 03:34 boinc_mmap_file
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas        28 Apr 13 03:34 wrapper_checkpoint.txt
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas   5206619 Apr 13 03:34 log.49263208._036695.job.log.1
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas       357 Apr 13 03:34 output.list
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas       410 Apr 13 03:34 runtime_log
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas   6195200 Apr 13 03:34 result.tar.gz
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas      8957 Apr 13 03:34 runtime_log.err
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas       664 Apr 13 03:34 548a60502cdf.diag
[2026-04-13 03:34:28] -rw-r--r--. 1 boincer umatlas     21289 Apr 13 03:34 stderr.txt
[2026-04-13 03:34:28] HITS file was successfully produced:
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas 197752431 Apr 13 03:18 shared/HITS.pool.root.1
[2026-04-13 03:34:28]  *** Contents of shared directory: ***
[2026-04-13 03:34:28] total 416956
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas 222329681 Apr 11 21:35 ATLAS.root_0
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas     15665 Apr 11 21:35 start_atlas.sh
[2026-04-13 03:34:28] -rw-r--r--. 2 boincer umatlas    656933 Apr 11 21:35 input.tar.gz
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas 197752431 Apr 13 03:18 HITS.pool.root.1
[2026-04-13 03:34:28] -rw-------. 1 boincer umatlas   6195200 Apr 13 03:34 result.tar.gz
03:34:30 (542748): run_atlas exited; CPU time 58085.240245
03:34:30 (542748): called boinc_finish(0)

</stderr_txt>
]]>

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