Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-11 09:48:14 (491696): vboxwrapper version 26210
2026-04-11 09:48:14 (491696): BOINC client version: 8.2.8
2026-04-11 09:48:14 (491696): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-11 09:48:15 (491696): Successfully copied 'init_data.xml' to the shared directory.
2026-04-11 09:48:15 (491696): Create VM. (boinc_1f16cd1a8a5bb919, slot#1)
2026-04-11 09:48:16 (491696): Setting Memory Size for VM. (4400MB)
2026-04-11 09:48:16 (491696): Setting CPU Count for VM. (4)
2026-04-11 09:48:16 (491696): Setting Chipset Options for VM.
2026-04-11 09:48:17 (491696): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-11 09:48:17 (491696): Setting Boot Options for VM.
2026-04-11 09:48:17 (491696): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-11 09:48:18 (491696): Enabling VM Network Access.
2026-04-11 09:48:18 (491696): Disabling USB Support for VM.
2026-04-11 09:48:18 (491696): Disabling COM Port Support for VM.
2026-04-11 09:48:18 (491696): Disabling LPT Port Support for VM.
2026-04-11 09:48:19 (491696): Disabling Audio Support for VM.
2026-04-11 09:48:19 (491696): Disabling Clipboard Support for VM.
2026-04-11 09:48:19 (491696): Disabling Drag and Drop Support for VM.
2026-04-11 09:48:19 (491696): Adding storage controller(s) to VM.
2026-04-11 09:48:20 (491696): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-11 09:48:20 (491696): Adding VirtualBox Guest Additions to VM.
2026-04-11 09:48:20 (491696): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-11 09:48:21 (491696): forwarding host port 63979 to guest port 80
2026-04-11 09:48:21 (491696): Enabling remote desktop for VM.
2026-04-11 09:48:21 (491696): Required extension pack not installed, remote desktop not enabled.
2026-04-11 09:48:21 (491696): Enabling shared directory for VM.
2026-04-11 09:48:22 (491696): Starting VM using VBoxManage interface. (boinc_1f16cd1a8a5bb919, slot#1)
2026-04-11 09:48:33 (491696): Successfully started VM. (PID = '259776')
2026-04-11 09:48:33 (491696): Reporting VM Process ID to BOINC.
2026-04-11 09:48:33 (491696): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-11 09:48:33 (491696): Guest Log: CPUID EDX: 0x178bfbff
2026-04-11 09:48:33 (491696): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-11 09:48:33 (491696): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-11 09:48:33 (491696): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-11 09:48:33 (491696): Detected: Web Application Enabled (http://localhost:63979)
2026-04-11 09:48:33 (491696): Preference change detected
2026-04-11 09:48:33 (491696): Setting CPU throttle for VM. (100%)
2026-04-11 09:48:33 (491696): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-11 09:48:35 (491696): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-11 09:48:35 (491696): Guest Log: BIOS: Booting from Hard Disk...
2026-04-11 09:48:38 (491696): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-11 09:48:38 (491696): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-11 09:48:38 (491696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-11 09:48:47 (491696): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-11 09:48:47 (491696): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-11 09:48:52 (491696): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000121 main     Log opened 2026-04-11T09:48:50.867998000Z
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000220 main     OS Product: Linux
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000250 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000274 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000299 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000299 main     Process ID: 1305
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.000300 main     Package type: LINUX_64BITS_GENERIC
2026-04-11 09:48:52 (491696): Guest Log: 00:00:00.001075 main     5.2.32 r132073 started. Verbose level = 0
2026-04-11 09:48:52 (491696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-11 09:48:52 (491696): Guest Log: [INFO] Mounting shared directory
2026-04-11 09:48:52 (491696): Guest Log: [INFO] Checking for init_data.xml
2026-04-11 09:49:02 (491696): Guest Log: 00:00:10.008203 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 647 842 000ns (GuestNow=1 775 915 341 517 944 000 ns GuestLast=1 775 900 930 870 102 000 ns fSetTimeLastLoop=true )
2026-04-11 09:50:27 (491696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-11 09:50:27 (491696): Guest Log: [INFO] Detected branch: prod
2026-04-11 09:50:27 (491696): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-11 09:50:27 (491696): Guest Log: Copying input files
2026-04-11 09:50:28 (491696): Guest Log: Copied input files into RunAtlas.
2026-04-11 09:50:28 (491696): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-11 09:50:28 (491696): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-11 09:50:28 (491696): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-11 09:50:28 (491696): Guest Log: Further information can be found at the LHC@home message board.
2026-04-11 09:53:26 (491696): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-11 09:53:27 (491696): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-11 09:53:27 (491696): Guest Log: 2.6.3.0 1624 3 32172 158345 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-11 09:53:27 (491696): Guest Log: copied the webapp to /var/www
2026-04-11 09:53:27 (491696): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-11 09:53:27 (491696): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-11 09:53:32 (491696): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-11 09:53:32 (491696): Guest Log:  *** Starting ATLAS job. (PandaID=7086996054 taskID=49645815) ***
2026-04-11 11:28:38 (491696): Status Report: Elapsed Time: '6000.397072'
2026-04-11 11:28:38 (491696): Status Report: CPU Time: '14703.328125'
2026-04-11 12:21:01 (491696): Guest Log:  *** Job finished ***
2026-04-11 12:21:01 (491696): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:27,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:27,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:53,242 | INFO     | [monitor] cgroup control has ended
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:55,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002165053248)>', '<ExcThread(monitor, started 140001857738496)>']
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:56,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:20:56,115 | INFO     | [monitor] control thread has ended
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,239 | INFO     | all workflow threads have been joined
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,239 | INFO     | end of generic workflow (traces error code: 0)
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,239 | INFO     | traces error code: 0
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,312 [wrapper] ==== pilot stdout END ====
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,316 [wrapper] ==== wrapper stdout RESUME ====
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,319 [wrapper] pilotpid: 6087
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,322 [wrapper] Pilot exit status: 0
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,378 [wrapper] pandaids: 7086996054
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,400 [wrapper] cleanup supervisor_pilot 26668 6088
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,406 [wrapper] Test setup, not cleaning
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,409 [wrapper] apfmon messages muted
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,413 [wrapper] ==== wrapper stdout END ====
2026-04-11 12:21:01 (491696): Guest Log: 2026-04-11 16:21:00,416 [wrapper] ==== wrapper stderr END ====
2026-04-11 12:21:01 (491696): Guest Log:  *** Error codes and diagnostics ***
2026-04-11 12:21:01 (491696): Guest Log:     "exeErrorCode": 0,
2026-04-11 12:21:01 (491696): Guest Log:     "pilotErrorCode": 0,
2026-04-11 12:21:01 (491696): Guest Log:  *** Listing of results directory ***
2026-04-11 12:21:01 (491696): Guest Log: total 204520
2026-04-11 12:21:01 (491696): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 11 11:59 pilot3.tar.gz
2026-04-11 12:21:01 (491696): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 11 12:02 runpilot2-wrapper.sh
2026-04-11 12:21:01 (491696): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 11 12:02 queuedata.json
2026-04-11 12:21:01 (491696): Guest Log: -rwxr-xr-x. 1 atlas atlas      8756 Apr 11 13:50 init_data.xml
2026-04-11 12:21:01 (491696): Guest Log: -rwxr-xr-x. 1 atlas atlas    656945 Apr 11 13:50 input.tar.gz
2026-04-11 12:21:01 (491696): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 11 13:50 start_atlas.sh
2026-04-11 12:21:01 (491696): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 11 13:50 EVNT.48629115._000068.pool.root.1 -> /data/./ATLAS.root_0
2026-04-11 12:21:01 (491696): Guest Log: -rw-r--r--. 1 atlas atlas      2626 Apr 11 13:53 pandaJob.out
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas    997820 Apr 11 13:55 agis_schedconf.cvmfs.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 11 13:55 agis_ddmendpoints.agis.ALL.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas       429 Apr 11 13:55 workernode_map.json
2026-04-11 12:21:01 (491696): Guest Log: drwx------. 5 atlas atlas      4096 Apr 11 13:55 pilot3
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas 203264881 Apr 11 16:18 HITS.49645815._001693.pool.root.1
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 11 16:19 memory_monitor_summary.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas    280065 Apr 11 16:19 log.49645815._001693.job.log.tgz.1
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas        95 Apr 11 16:19 pilot_heartbeat.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas      6401 Apr 11 16:19 heartbeat_new.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas      6292 Apr 11 16:19 heartbeat.json
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas      4872 Apr 11 16:21 pilotlog.txt
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas    803633 Apr 11 16:21 log.49645815._001693.job.log.1
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas       357 Apr 11 16:21 output.list
2026-04-11 12:21:01 (491696): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 11 16:21 runtime_log
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas   1105920 Apr 11 16:21 result.tar.gz
2026-04-11 12:21:01 (491696): Guest Log: -rw-r--r--. 1 atlas atlas      8433 Apr 11 16:21 runtime_log.err
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas       675 Apr 11 16:21 3849965cf54c.diag
2026-04-11 12:21:01 (491696): Guest Log: Looking for outputfile HITS.49645815._001693.pool.root.1
2026-04-11 12:21:01 (491696): Guest Log: HITS file was successfully produced
2026-04-11 12:21:01 (491696): Guest Log: -rw-------. 1 atlas atlas 203264881 Apr 11 16:18 /home/atlas/RunAtlas/HITS.49645815._001693.pool.root.1
2026-04-11 12:21:02 (491696): Guest Log: Successfully finished the ATLAS job!
2026-04-11 12:21:02 (491696): Guest Log: Copying the results back to the shared directory!
2026-04-11 12:21:02 (491696): Guest Log:  *** Contents of shared directory: ***
2026-04-11 12:21:02 (491696): Guest Log: total 418860
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root 223850496 Apr 11 13:48 ATLAS.root_0
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root 203264881 Apr 11 16:21 HITS.pool.root.1
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root      8756 Apr 11 13:48 init_data.xml
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root    656945 Apr 11 13:47 input.tar.gz
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root   1105920 Apr 11 16:21 result.tar.gz
2026-04-11 12:21:02 (491696): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 11 13:47 start_atlas.sh
2026-04-11 12:21:02 (491696): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-11 12:21:02 (491696): VM Completion File Detected.
2026-04-11 12:21:02 (491696): Powering off VM.
2026-04-11 12:21:02 (491696): Successfully stopped VM.
2026-04-11 12:21:02 (491696): Deregistering VM. (boinc_1f16cd1a8a5bb919, slot#1)
2026-04-11 12:21:03 (491696): Removing network bandwidth throttle group from VM.
2026-04-11 12:21:03 (491696): Removing VM from VirtualBox.
2026-04-11 12:21:08 (491696): called boinc_finish(0)

</stderr_txt>
]]>

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