Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:07:16 (2325232): wrapper (7.7.26015): starting
11:07:16 (2325232): wrapper: running run_atlas (--nthreads 12)
[2026-04-11 11:07:16] Arguments: --nthreads 12
[2026-04-11 11:07:16] Threads: 12
[2026-04-11 11:07:16] Checking for CVMFS
[2026-04-11 11:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 11:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 11:07:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 11:07:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 11:07:16] 2.11.0.0 1638008 1067 77176 158342 2 188 3633719 6144000 14432 130560 0 16822843 99.999 46911 874 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-04-11 11:07:16] CVMFS is ok
[2026-04-11 11:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 11:07:16] Checking for apptainer binary...
[2026-04-11 11:07:16] apptainer is not installed, using version from CVMFS
[2026-04-11 11:07:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 11:07:17] radiat0r
[2026-04-11 11:07:17] apptainer works
[2026-04-11 11:07:17] Set ATHENA_PROC_NUMBER=12
[2026-04-11 11:07:17] Set ATHENA_CORE_NUMBER=12
[2026-04-11 11:07:17] Starting ATLAS job with PandaID=7082814790
[2026-04-11 11:07:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 12:01:48]  *** The last 200 lines of the pilot log: ***
[2026-04-11 12:01:48]  domain=
[2026-04-11 12:01:48]  filesize=354723
[2026-04-11 12:01:48]  filetype=log
[2026-04-11 12:01:48]  guid=6b965ba1-8be4-4ca7-b653-58dd7b531bc0
[2026-04-11 12:01:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-11 12:01:48]  is_altstaged=None
[2026-04-11 12:01:48]  is_tar=False
[2026-04-11 12:01:48]  lfn=log.49263200._028665.job.log.tgz.1
[2026-04-11 12:01:48]  mtime=0
[2026-04-11 12:01:48]  protocol_id=None
[2026-04-11 12:01:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-11 12:01:48]  replicas=None
[2026-04-11 12:01:48]  scope=mc23_13p6TeV
[2026-04-11 12:01:48]  status=None
[2026-04-11 12:01:48]  status_code=0
[2026-04-11 12:01:48]  storage_token=
[2026-04-11 12:01:48]  surl=/var/lib/boinc/slots/11/PanDA_Pilot-7082814790/log.49263200._028665.job.log.tgz.1
[2026-04-11 12:01:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/11/log.49263200._028665.job.log.tgz.1
[2026-04-11 12:01:48]  workdir=None
[2026-04-11 12:01:48] ]
[2026-04-11 12:01:48] 2026-04-11 12:00:41,733 | INFO     | transferring file log.49263200._028665.job.log.tgz.1 from /var/lib/boinc/slots/11/PanDA_Pilot-7082814790/log.49263200._028665.job.log.tgz.1 to /var/lib/boinc/slots
[2026-04-11 12:01:48] 2026-04-11 12:00:41,734 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/11/PanDA_Pilot-7082814790/log.49263200._028665.job.log.tgz.1 /var/lib/boinc/slots/11/log.49263200._028665.j
[2026-04-11 12:01:48] 2026-04-11 12:00:41,760 | INFO     | adding to output.list: log.49263200._028665.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/11/log.49263200._028665.job.log.tg
[2026-04-11 12:01:48] 2026-04-11 12:00:41,761 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-11 12:01:48] 2026-04-11 12:00:41,762 | INFO     | summary of transferred files:
[2026-04-11 12:01:48] 2026-04-11 12:00:41,762 | INFO     |  -- lfn=log.49263200._028665.job.log.tgz.1, status_code=0, status=transferred
[2026-04-11 12:01:48] 2026-04-11 12:00:41,762 | INFO     | stage-out finished correctly
[2026-04-11 12:01:48] 2026-04-11 12:00:44,065 | WARNING  | process 2335544 can no longer be monitored (due to stat problems) - aborting
[2026-04-11 12:01:48] 2026-04-11 12:00:44,065 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7082814790/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 12:01:48] 2026-04-11 12:00:44,476 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 12:01:48] 2026-04-11 12:00:44,965 | INFO     | number of running child processes to parent process 2335544: 1
[2026-04-11 12:01:48] 2026-04-11 12:00:44,965 | INFO     | maximum number of monitored processes: 6
[2026-04-11 12:01:48] 2026-04-11 12:00:45,383 | INFO     | job 7082814790 has state=finished
[2026-04-11 12:01:48] 2026-04-11 12:00:45,384 | INFO     | preparing for final server update for job 7082814790 in state='finished'
[2026-04-11 12:01:48] 2026-04-11 12:00:45,384 | INFO     | reading metadata from: /var/lib/boinc/slots/11/PanDA_Pilot-7082814790/jobReport.json
[2026-04-11 12:01:48] 2026-04-11 12:00:45,387 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/11/workernode_map.json
[2026-04-11 12:01:48] 2026-04-11 12:00:45,387 | INFO     | this job has now completed (state=finished)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,387 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,387 | INFO     | log transfer has been attempted: DONE
[2026-04-11 12:01:48] 2026-04-11 12:00:45,387 | INFO     | job 7082814790 has finished - writing final server update
[2026-04-11 12:01:48] 2026-04-11 12:00:45,388 | INFO     | total number of processed events: 400 (read)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,479 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7082814790/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,480 | INFO     | extracted standard info from prmon json
[2026-04-11 12:01:48] 2026-04-11 12:00:45,480 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 12:01:48] 2026-04-11 12:00:45,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 12:01:48] 2026-04-11 12:00:45,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 12:01:48] 2026-04-11 12:00:45,482 | INFO     | fitting pss+swap vs Time
[2026-04-11 12:01:48] 2026-04-11 12:00:45,482 | INFO     | sum of square deviations: 28242390.0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,482 | INFO     | sum of deviations: 504584069.99999994
[2026-04-11 12:01:48] 2026-04-11 12:00:45,482 | INFO     | mean x (centered): 0.0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,482 | INFO     | mean y: 2654333.1555555556
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | intersect: 2654333.1555555556
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | chi2: 0.0005463583227518261
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | current memory leak: 17.87 B/s (using 45 data points, chi2=0.00)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | could have reported an average CPU frequency of 2291 MHz (5 samples)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | ..............................
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | . Timing measurements:
[2026-04-11 12:01:48] 2026-04-11 12:00:45,483 | INFO     | . get job = 0 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . initial setup = 8 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . payload setup = 12 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . stage-in = 0 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . payload execution = 3153 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . stage-out = 0 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | . log creation = 0 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,484 | INFO     | ..............................
[2026-04-11 12:01:48] 2026-04-11 12:00:45,903 | INFO     | 
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | job summary report
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | --------------------------------------------------
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | PanDA job id: 7082814790
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | task id: 49263200
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | errors: (none)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | pilot state: finished 
[2026-04-11 12:01:48] 2026-04-11 12:00:45,904 | INFO     | transexitcode: 0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | exeerrorcode: 0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | exeerrordiag: 
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | exitcode: 0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | exitmsg: OK
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | cpuconsumptiontime: 34347 s
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | nevents: 400
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | neventsw: 0
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | pid: 2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | pgrp: 2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | corecount: 12
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | event service: False
[2026-04-11 12:01:48] 2026-04-11 12:00:45,905 | INFO     | sizes: {0: 2279664, 1: 2281493, 11: 2281493, 3170: 2307066, 3172: 2316066, 3175: 2316122, 3176: 2316476}
[2026-04-11 12:01:48] 2026-04-11 12:00:45,906 | INFO     | --------------------------------------------------
[2026-04-11 12:01:48] 2026-04-11 12:00:45,906 | INFO     | 
[2026-04-11 12:01:48] 2026-04-11 12:00:45,906 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-11 12:01:48] 2026-04-11 12:00:45,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,936 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,936 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | job 7082814790 has completed (purged errors)
[2026-04-11 12:01:48] 2026-04-11 12:00:45,938 | INFO     | overall cleanup function is called
[2026-04-11 12:01:48] 2026-04-11 12:00:46,949 | INFO     | --- collectZombieJob: --- 10, [2335544]
[2026-04-11 12:01:48] 2026-04-11 12:00:46,949 | INFO     | zombie collector waiting for pid 2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:46,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 12:01:48] 2026-04-11 12:00:46,949 | INFO     | collected zombie processes
[2026-04-11 12:01:48] 2026-04-11 12:00:46,950 | INFO     | will attempt to kill all subprocesses of pid=2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:47,806 | INFO     | process IDs to be killed: [2335544] (in reverse order)
[2026-04-11 12:01:48] 2026-04-11 12:00:48,069 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 12:01:48] 2026-04-11 12:00:48,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 12:01:48] 2026-04-11 12:00:48,098 | INFO     | did not find any defunct processes belonging to 2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:48,123 | INFO     | did not find any defunct processes belonging to 2335544
[2026-04-11 12:01:48] 2026-04-11 12:00:48,124 | INFO     | Ready for new job
[2026-04-11 12:01:48] 2026-04-11 12:00:48,127 | INFO     | **************************************
[2026-04-11 12:01:48] 2026-04-11 12:00:48,127 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 12:01:48] 2026-04-11 12:00:48,127 | INFO     | **************************************
[2026-04-11 12:01:48] 2026-04-11 12:00:48,127 | INFO     | 
[2026-04-11 12:01:48] 2026-04-11 12:00:48,145 | INFO     | architecture information:
[2026-04-11 12:01:48] 2026-04-11 12:00:48,146 | INFO     | executing command: cat /etc/os-release
[2026-04-11 12:01:48] 2026-04-11 12:00:48,169 | INFO     | cat /etc/os-release:
[2026-04-11 12:01:48] NAME="CentOS Linux"
[2026-04-11 12:01:48] VERSION="7 (Core)"
[2026-04-11 12:01:48] ID="centos"
[2026-04-11 12:01:48] ID_LIKE="rhel fedora"
[2026-04-11 12:01:48] VERSION_ID="7"
[2026-04-11 12:01:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 12:01:48] ANSI_COLOR="0;31"
[2026-04-11 12:01:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 12:01:48] HOME_URL="https://www.centos.org/"
[2026-04-11 12:01:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 12:01:48] 
[2026-04-11 12:01:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 12:01:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 12:01:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 12:01:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 12:01:48] 
[2026-04-11 12:01:48] 2026-04-11 12:00:48,170 | INFO     | **************************************
[2026-04-11 12:01:48] 2026-04-11 12:00:48,673 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-11 12:01:48] 2026-04-11 12:00:48,701 | INFO     | sufficient remaining disk space (1717917712384 B)
[2026-04-11 12:01:48] 2026-04-11 12:00:48,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 12:01:48] 2026-04-11 12:00:48,702 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 12:01:48] 2026-04-11 12:00:48,702 | INFO     | update_server=False
[2026-04-11 12:01:48] 2026-04-11 12:00:48,702 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 12:01:48] 2026-04-11 12:00:48,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:01:48] 2026-04-11 12:00:48,703 | INFO     | aborting loop
[2026-04-11 12:01:48] 2026-04-11 12:00:49,696 | INFO     | all data control threads have been joined
[2026-04-11 12:01:48] 2026-04-11 12:00:49,706 | INFO     | [job] retrieve thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:49,709 | INFO     | [job] job monitor thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:49,861 | INFO     | all job control threads have been joined
[2026-04-11 12:01:48] 2026-04-11 12:00:49,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 12:01:48] 2026-04-11 12:00:49,927 | INFO     | [job] validate thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:49,956 | INFO     | all payload control threads have been joined
[2026-04-11 12:01:48] 2026-04-11 12:00:50,174 | INFO     | [payload] validate_post thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,201 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,461 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 12:01:48] 2026-04-11 12:00:50,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:01:48] 2026-04-11 12:00:50,702 | INFO     | [data] control thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,812 | INFO     | [data] copytool_in thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,834 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,866 | INFO     | [job] control thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:50,962 | INFO     | [payload] control thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:51,126 | INFO     | [payload] failed_post thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:51,591 | INFO     | [job] queue monitor thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:51,876 | INFO     | [data] copytool_out thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:54,587 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:00:59,685 | INFO     | job.realtimelogging is not enabled
[2026-04-11 12:01:48] 2026-04-11 12:01:00,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 12:01:48] 2026-04-11 12:01:19,254 | INFO     | PID=2329956 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-11 12:01:48] 2026-04-11 12:01:19,254 | INFO     | .. there are 17 such processes running
[2026-04-11 12:01:48] 2026-04-11 12:01:19,256 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 12:01:48] 2026-04-11 12:01:19,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 12:01:48] 2026-04-11 12:01:19,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 12:01:48] 2026-04-11 12:01:42,758 | INFO     | [monitor] cgroup control has ended
[2026-04-11 12:01:48] 2026-04-11 12:01:43,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911568357184)>', '<ExcThread(monitor, started 139911260772096)>']
[2026-04-11 12:01:48] 2026-04-11 12:01:43,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 12:01:48] 2026-04-11 12:01:43,366 | INFO     | [monitor] control thread has ended
[2026-04-11 12:01:48] 2026-04-11 12:01:48,037 | INFO     | all workflow threads have been joined
[2026-04-11 12:01:48] 2026-04-11 12:01:48,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 12:01:48] 2026-04-11 12:01:48,038 | INFO     | traces error code: 0
[2026-04-11 12:01:48] 2026-04-11 12:01:48,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 12:01:48] 2026-04-11 12:01:48,194 [wrapper] ==== pilot stdout END ====
[2026-04-11 12:01:48] 2026-04-11 12:01:48,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 12:01:48] 2026-04-11 12:01:48,200 [wrapper] pilotpid: 2329956
[2026-04-11 12:01:48] 2026-04-11 12:01:48,204 [wrapper] Pilot exit status: 0
[2026-04-11 12:01:48] 2026-04-11 12:01:48,217 [wrapper] pandaids: 7082814790
[2026-04-11 12:01:48] 2026-04-11 12:01:48,378 [wrapper] cleanup supervisor_pilot 2534129 2329957
[2026-04-11 12:01:48] 2026-04-11 12:01:48,381 [wrapper] Test setup, not cleaning
[2026-04-11 12:01:48] 2026-04-11 12:01:48,384 [wrapper] apfmon messages muted
[2026-04-11 12:01:48] 2026-04-11 12:01:48,386 [wrapper] ==== wrapper stdout END ====
[2026-04-11 12:01:48] 2026-04-11 12:01:48,388 [wrapper] ==== wrapper stderr END ====
[2026-04-11 12:01:48]  *** Error codes and diagnostics ***
[2026-04-11 12:01:48]     "exeErrorCode": 0,
[2026-04-11 12:01:48]     "pilotErrorCode": 0,
[2026-04-11 12:01:48]  *** Listing of results directory ***
[2026-04-11 12:01:48] total 414876
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc    644190 Apr 11 06:27 pilot3.tar.gz
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc      5094 Apr 11 06:33 queuedata.json
[2026-04-11 12:01:48] -rwx------ 1 boinc boinc     36322 Apr 11 06:34 runpilot2-wrapper.sh
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc       100 Apr 11 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 12:01:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 11:07 run_atlas
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc       105 Apr 11 11:07 job.xml
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc 225973009 Apr 11 11:07 EVNT.49263198._000398.pool.root.1
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc     15665 Apr 11 11:07 start_atlas.sh
[2026-04-11 12:01:48] drwxrwx--x 2 boinc boinc      4096 Apr 11 11:07 shared
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc    656936 Apr 11 11:07 input.tar.gz
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc      9331 Apr 11 11:07 init_data.xml
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc         0 Apr 11 11:07 boinc_setup_complete
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc         0 Apr 11 11:07 boinc_lockfile
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc      2573 Apr 11 11:07 pandaJob.out
[2026-04-11 12:01:48] -rw------- 1 boinc boinc    997836 Apr 11 11:07 agis_schedconf.cvmfs.json
[2026-04-11 12:01:48] -rw------- 1 boinc boinc   1511579 Apr 11 11:07 agis_ddmendpoints.agis.ALL.json
[2026-04-11 12:01:48] -rw------- 1 boinc boinc       419 Apr 11 11:07 workernode_map.json
[2026-04-11 12:01:48] drwx------ 5 boinc boinc      4096 Apr 11 11:07 pilot3
[2026-04-11 12:01:48] -rw------- 1 boinc boinc 193438968 Apr 11 12:00 HITS.49263200._028665.pool.root.1
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc       487 Apr 11 12:00 boinc_task_state.xml
[2026-04-11 12:01:48] -rw------- 1 boinc boinc      1028 Apr 11 12:00 memory_monitor_summary.json
[2026-04-11 12:01:48] -rw------- 1 boinc boinc    354723 Apr 11 12:00 log.49263200._028665.job.log.tgz.1
[2026-04-11 12:01:48] -rw------- 1 boinc boinc      6304 Apr 11 12:00 heartbeat_new.json
[2026-04-11 12:01:48] -rw------- 1 boinc boinc      6195 Apr 11 12:00 heartbeat.json
[2026-04-11 12:01:48] -rw------- 1 boinc boinc        95 Apr 11 12:01 pilot_heartbeat.json
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc      8192 Apr 11 12:01 boinc_mmap_file
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc        27 Apr 11 12:01 wrapper_checkpoint.txt
[2026-04-11 12:01:48] -rw------- 1 boinc boinc      4895 Apr 11 12:01 pilotlog.txt
[2026-04-11 12:01:48] -rw------- 1 boinc boinc    322797 Apr 11 12:01 log.49263200._028665.job.log.1
[2026-04-11 12:01:48] -rw------- 1 boinc boinc       357 Apr 11 12:01 output.list
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc       410 Apr 11 12:01 runtime_log
[2026-04-11 12:01:48] -rw------- 1 boinc boinc    696320 Apr 11 12:01 result.tar.gz
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc      8409 Apr 11 12:01 runtime_log.err
[2026-04-11 12:01:48] -rw------- 1 boinc boinc       643 Apr 11 12:01 eb63732fd6fd.diag
[2026-04-11 12:01:48] -rw-r--r-- 1 boinc boinc     20780 Apr 11 12:01 stderr.txt
[2026-04-11 12:01:48] HITS file was successfully produced:
[2026-04-11 12:01:48] -rw------- 1 boinc boinc 193438968 Apr 11 12:00 shared/HITS.pool.root.1
[2026-04-11 12:01:48]  *** Contents of shared directory: ***
[2026-04-11 12:01:48] total 410936
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc 225973009 Apr 11 11:07 ATLAS.root_0
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc     15665 Apr 11 11:07 start_atlas.sh
[2026-04-11 12:01:48] -rw-r--r-- 2 boinc boinc    656936 Apr 11 11:07 input.tar.gz
[2026-04-11 12:01:48] -rw------- 1 boinc boinc 193438968 Apr 11 12:00 HITS.pool.root.1
[2026-04-11 12:01:48] -rw------- 1 boinc boinc    696320 Apr 11 12:01 result.tar.gz
12:01:50 (2325232): run_atlas exited; CPU time 34556.377760
12:01:50 (2325232): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN