Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:19:21 (12307): wrapper (7.7.26015): starting
20:19:21 (12307): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 20:19:21] Arguments: --nthreads 8
[2026-04-11 20:19:21] Threads: 8
[2026-04-11 20:19:21] Checking for CVMFS
[2026-04-11 20:19:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 20:19:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 20:19:25] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 20:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 20:19:27] 2.11.2.0 27056 14683 102220 158353 1 53 20718261 25165825 96 130560 0 3780502 99.537 4169596 6905 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-11 20:19:27] CVMFS is ok
[2026-04-11 20:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 20:19:27] Checking for apptainer binary...
[2026-04-11 20:19:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 20:19:27] Running /usr/bin/apptainer --version
[2026-04-11 20:19:27] apptainer version 1.3.2-1.el7
[2026-04-11 20:19:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 20:19:38] cg-vwn402.simple-grid.lan
[2026-04-11 20:19:38] apptainer works
[2026-04-11 20:19:38] Set ATHENA_PROC_NUMBER=8
[2026-04-11 20:19:38] Set ATHENA_CORE_NUMBER=8
[2026-04-11 20:19:38] Starting ATLAS job with PandaID=7086957423
[2026-04-11 20:19:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 00:43:41]  *** The last 200 lines of the pilot log: ***
[2026-04-12 00:43:41] 2026-04-11 22:42:53,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 00:43:41] 2026-04-11 22:42:53,538 | INFO     | fitting pss+swap vs Time
[2026-04-12 00:43:41] 2026-04-11 22:42:53,539 | INFO     | sum of square deviations: 4729621702.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,541 | INFO     | sum of deviations: 120299767130.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,541 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,541 | INFO     | mean y: 2420941.790322581
[2026-04-12 00:43:41] 2026-04-11 22:42:53,541 | INFO     | intersect: 2420941.790322581
[2026-04-12 00:43:41] 2026-04-11 22:42:53,542 | INFO     | chi2: 9.646907909889872
[2026-04-12 00:43:41] 2026-04-11 22:42:53,542 | INFO     | sum of square deviations: 4449281562.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,545 | INFO     | sum of deviations: 133825015310.00003
[2026-04-12 00:43:41] 2026-04-11 22:42:53,545 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,545 | INFO     | mean y: 2428153.8971193414
[2026-04-12 00:43:41] 2026-04-11 22:42:53,545 | INFO     | intersect: 2428153.8971193414
[2026-04-12 00:43:41] 2026-04-11 22:42:53,546 | INFO     | chi2: 8.968846874172637
[2026-04-12 00:43:41] 2026-04-11 22:42:53,546 | INFO     | current chi2=8.968846874172637 (change=7.02879142260803 %)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,550 | INFO     | right removable region: 242
[2026-04-12 00:43:41] 2026-04-11 22:42:53,550 | INFO     | sum of square deviations: 4449281562.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,553 | INFO     | sum of deviations: 32730016710.999977
[2026-04-12 00:43:41] 2026-04-11 22:42:53,553 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,553 | INFO     | mean y: 2468557.0164609053
[2026-04-12 00:43:41] 2026-04-11 22:42:53,553 | INFO     | intersect: 2468557.0164609053
[2026-04-12 00:43:41] 2026-04-11 22:42:53,554 | INFO     | chi2: 4.289587165170205
[2026-04-12 00:43:41] 2026-04-11 22:42:53,554 | INFO     | current chi2=4.289587165170205 (change=55.53407158813467 %)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,554 | INFO     | sum of square deviations: 4180243959.5
[2026-04-12 00:43:41] 2026-04-11 22:42:53,556 | INFO     | sum of deviations: -35143911486.5
[2026-04-12 00:43:41] 2026-04-11 22:42:53,556 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,557 | INFO     | mean y: 2506990.9033613447
[2026-04-12 00:43:41] 2026-04-11 22:42:53,557 | INFO     | intersect: 2506990.9033613447
[2026-04-12 00:43:41] 2026-04-11 22:42:53,557 | INFO     | chi2: 1.3108647584206077
[2026-04-12 00:43:41] 2026-04-11 22:42:53,557 | INFO     | current chi2=1.3108647584206077 (change=69.44077115242408 %)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,558 | INFO     | sum of square deviations: 3922276332.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,560 | INFO     | sum of deviations: -51749082392.999985
[2026-04-12 00:43:41] 2026-04-11 22:42:53,560 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,560 | INFO     | mean y: 2516711.5107296137
[2026-04-12 00:43:41] 2026-04-11 22:42:53,560 | INFO     | intersect: 2516711.5107296137
[2026-04-12 00:43:41] 2026-04-11 22:42:53,561 | INFO     | chi2: 0.9719836043504976
[2026-04-12 00:43:41] 2026-04-11 22:42:53,561 | INFO     | current chi2=0.9719836043504976 (change=25.851725122156022 %)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,561 | INFO     | sum of square deviations: 3675146117.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,563 | INFO     | sum of deviations: -47192311785.5
[2026-04-12 00:43:41] 2026-04-11 22:42:53,564 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,564 | INFO     | mean y: 2513875.951754386
[2026-04-12 00:43:41] 2026-04-11 22:42:53,564 | INFO     | intersect: 2513875.951754386
[2026-04-12 00:43:41] 2026-04-11 22:42:53,564 | INFO     | chi2: 0.9603248707124223
[2026-04-12 00:43:41] 2026-04-11 22:42:53,564 | INFO     | current chi2=0.9603248707124223 (change=1.1994784259623266 %)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,565 | INFO     | left removable region: 20
[2026-04-12 00:43:41] 2026-04-11 22:42:53,565 | INFO     | sum of square deviations: 3392567795.5
[2026-04-12 00:43:41] 2026-04-11 22:42:53,567 | INFO     | sum of deviations: -31404365107.5
[2026-04-12 00:43:41] 2026-04-11 22:42:53,567 | INFO     | mean x (centered): 0.0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,567 | INFO     | mean y: 2523885.121621622
[2026-04-12 00:43:41] 2026-04-11 22:42:53,568 | INFO     | intersect: 2523885.121621622
[2026-04-12 00:43:41] 2026-04-11 22:42:53,568 | INFO     | chi2: 0.1707962335960924
[2026-04-12 00:43:41] 2026-04-11 22:42:53,568 | INFO     | current memory leak: -9.26 B/s (using 222 data points, chi2=0.17)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,569 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,569 | INFO     | ..............................
[2026-04-12 00:43:41] 2026-04-11 22:42:53,569 | INFO     | . Timing measurements:
[2026-04-12 00:43:41] 2026-04-11 22:42:53,569 | INFO     | . get job = 0 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,569 | INFO     | . initial setup = 124 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,570 | INFO     | . payload setup = 163 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,570 | INFO     | . stage-in = 0 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,570 | INFO     | . payload execution = 15221 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,575 | INFO     | . stage-out = 3 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,575 | INFO     | . log creation = 1 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,575 | INFO     | ..............................
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | 
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | job summary report
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | --------------------------------------------------
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | PanDA job id: 7086957423
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | task id: 49263208
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | errors: (none)
[2026-04-12 00:43:41] 2026-04-11 22:42:53,705 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | pilot state: finished 
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | transexitcode: 0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | exeerrorcode: 0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | exeerrordiag: 
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | exitcode: 0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | exitmsg: OK
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | cpuconsumptiontime: 56928 s
[2026-04-12 00:43:41] 2026-04-11 22:42:53,706 | INFO     | nevents: 400
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | neventsw: 0
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | pid: 20728
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | pgrp: 20728
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | corecount: 8
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | event service: False
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | sizes: {0: 2279611, 1: 2280068, 2: 2281524, 12: 2281524, 15390: 2312620, 15395: 2321618, 15396: 2321996}
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | --------------------------------------------------
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | 
[2026-04-12 00:43:41] 2026-04-11 22:42:53,707 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-12 00:43:41] 2026-04-11 22:42:54,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 00:43:41] 2026-04-11 22:42:54,271 | INFO     | job 7086957423 has completed (purged errors)
[2026-04-12 00:43:41] 2026-04-11 22:42:54,271 | INFO     | overall cleanup function is called
[2026-04-12 00:43:41] 2026-04-11 22:42:54,762 | INFO     | PID=16280 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-12 00:43:41] 2026-04-11 22:42:54,763 | INFO     | .. there are 2 such processes running
[2026-04-12 00:43:41] 2026-04-11 22:42:55,280 | INFO     | --- collectZombieJob: --- 10, [20728]
[2026-04-12 00:43:41] 2026-04-11 22:42:55,280 | INFO     | zombie collector waiting for pid 20728
[2026-04-12 00:43:41] 2026-04-11 22:42:55,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 00:43:41] 2026-04-11 22:42:55,280 | INFO     | collected zombie processes
[2026-04-12 00:43:41] 2026-04-11 22:42:55,281 | INFO     | will attempt to kill all subprocesses of pid=20728
[2026-04-12 00:43:41] 2026-04-11 22:42:55,360 | INFO     | process IDs to be killed: [20728] (in reverse order)
[2026-04-12 00:43:41] 2026-04-11 22:42:56,346 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 00:43:41] 2026-04-11 22:42:56,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 00:43:41] 2026-04-11 22:42:56,351 | INFO     | did not find any defunct processes belonging to 20728
[2026-04-12 00:43:41] 2026-04-11 22:42:56,353 | INFO     | did not find any defunct processes belonging to 20728
[2026-04-12 00:43:41] 2026-04-11 22:42:56,353 | INFO     | Ready for new job
[2026-04-12 00:43:41] 2026-04-11 22:42:56,355 | INFO     | **************************************
[2026-04-12 00:43:41] 2026-04-11 22:42:56,355 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 00:43:41] 2026-04-11 22:42:56,355 | INFO     | **************************************
[2026-04-12 00:43:41] 2026-04-11 22:42:56,355 | INFO     | 
[2026-04-12 00:43:41] 2026-04-11 22:42:56,356 | INFO     | pilot is running in a VM
[2026-04-12 00:43:41] 2026-04-11 22:42:56,356 | INFO     | architecture information:
[2026-04-12 00:43:41] 2026-04-11 22:42:56,363 | INFO     | executing command: cat /etc/os-release
[2026-04-12 00:43:41] 2026-04-11 22:42:56,668 | INFO     | cat /etc/os-release:
[2026-04-12 00:43:41] NAME="CentOS Linux"
[2026-04-12 00:43:41] VERSION="7 (Core)"
[2026-04-12 00:43:41] ID="centos"
[2026-04-12 00:43:41] ID_LIKE="rhel fedora"
[2026-04-12 00:43:41] VERSION_ID="7"
[2026-04-12 00:43:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 00:43:41] ANSI_COLOR="0;31"
[2026-04-12 00:43:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 00:43:41] HOME_URL="https://www.centos.org/"
[2026-04-12 00:43:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 00:43:41] 
[2026-04-12 00:43:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 00:43:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 00:43:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 00:43:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 00:43:41] 
[2026-04-12 00:43:41] 2026-04-11 22:42:56,669 | INFO     | **************************************
[2026-04-12 00:43:41] 2026-04-11 22:42:57,172 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-12 00:43:41] 2026-04-11 22:42:57,476 | INFO     | sufficient remaining disk space (496748199936 B)
[2026-04-12 00:43:41] 2026-04-11 22:42:57,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 00:43:41] 2026-04-11 22:42:57,476 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 00:43:41] 2026-04-11 22:42:57,476 | INFO     | update_server=False
[2026-04-12 00:43:41] 2026-04-11 22:42:57,476 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 00:43:41] 2026-04-11 22:42:57,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 00:43:41] 2026-04-11 22:42:57,477 | INFO     | aborting loop
[2026-04-12 00:43:41] 2026-04-11 22:42:57,483 | INFO     | all data control threads have been joined
[2026-04-12 00:43:41] 2026-04-11 22:42:57,524 | INFO     | all job control threads have been joined
[2026-04-12 00:43:41] 2026-04-11 22:42:58,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 00:43:41] 2026-04-11 22:42:58,482 | INFO     | [job] retrieve thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,483 | INFO     | [job] job monitor thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,489 | INFO     | [data] control thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,530 | INFO     | [job] control thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,536 | INFO     | [data] copytool_in thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 00:43:41] 2026-04-11 22:42:58,759 | INFO     | [payload] failed_post thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,771 | INFO     | all payload control threads have been joined
[2026-04-12 00:43:41] 2026-04-11 22:42:58,936 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:58,937 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,271 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,427 | INFO     | [job] validate thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 00:43:41] 2026-04-11 22:42:59,720 | INFO     | [job] queue monitor thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,777 | INFO     | [payload] control thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,790 | INFO     | [payload] validate_post thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:42:59,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:43:00,173 | INFO     | [data] copytool_out thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:43:03,556 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 00:43:41] 2026-04-11 22:43:26,901 | INFO     | PID=16280 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-12 00:43:41] 2026-04-11 22:43:26,901 | INFO     | .. there are 2 such processes running
[2026-04-12 00:43:41] 2026-04-11 22:43:26,902 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 00:43:41] 2026-04-11 22:43:26,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 00:43:41] 2026-04-11 22:43:26,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 00:43:41] 2026-04-11 22:43:30,918 | INFO     | [monitor] cgroup control has ended
[2026-04-12 00:43:41] 2026-04-11 22:43:30,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117676627776)>', '<ExcThread(monitor, started 140117226268416)>']
[2026-04-12 00:43:41] 2026-04-11 22:43:31,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 00:43:41] 2026-04-11 22:43:31,932 | INFO     | [monitor] control thread has ended
[2026-04-12 00:43:41] 2026-04-11 22:43:35,973 | INFO     | all workflow threads have been joined
[2026-04-12 00:43:41] 2026-04-11 22:43:35,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 00:43:41] 2026-04-11 22:43:35,974 | INFO     | traces error code: 0
[2026-04-12 00:43:41] 2026-04-11 22:43:35,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 00:43:41] 2026-04-11 22:43:36,404 [wrapper] ==== pilot stdout END ====
[2026-04-12 00:43:41] 2026-04-11 22:43:36,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 00:43:41] 2026-04-11 22:43:36,586 [wrapper] pilotpid: 16280
[2026-04-12 00:43:41] 2026-04-11 22:43:36,695 [wrapper] Pilot exit status: 0
[2026-04-12 00:43:41] 2026-04-11 22:43:37,175 [wrapper] pandaids: 7086957423
[2026-04-12 00:43:41] 2026-04-11 22:43:38,104 [wrapper] cleanup supervisor_pilot 26837 16281
[2026-04-12 00:43:41] 2026-04-11 22:43:38,217 [wrapper] Test setup, not cleaning
[2026-04-12 00:43:41] 2026-04-11 22:43:38,324 [wrapper] apfmon messages muted
[2026-04-12 00:43:41] 2026-04-11 22:43:38,415 [wrapper] ==== wrapper stdout END ====
[2026-04-12 00:43:41] 2026-04-11 22:43:38,493 [wrapper] ==== wrapper stderr END ====
[2026-04-12 00:43:41]  *** Error codes and diagnostics ***
[2026-04-12 00:43:41]     "exeErrorCode": 0,
[2026-04-12 00:43:41]     "pilotErrorCode": 0,
[2026-04-12 00:43:41]  *** Listing of results directory ***
[2026-04-12 00:43:41] total 413312
[2026-04-12 00:43:41] -rwx------. 1 boinc boinc     36322 Apr 11 09:45 runpilot2-wrapper.sh
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc      5094 Apr 11 09:46 queuedata.json
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc    644190 Apr 11 09:46 pilot3.tar.gz
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc       100 Apr 11 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 00:43:41] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 20:19 run_atlas
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc       105 Apr 11 20:19 job.xml
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc      6305 Apr 11 20:19 init_data.xml
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc 222237363 Apr 11 20:19 EVNT.49263206._000898.pool.root.1
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc     15665 Apr 11 20:19 start_atlas.sh
[2026-04-12 00:43:41] drwxrwx--x. 2 boinc boinc        68 Apr 11 20:19 shared
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc    656930 Apr 11 20:19 input.tar.gz
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc         0 Apr 11 20:19 boinc_lockfile
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc      2575 Apr 11 20:19 pandaJob.out
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc       415 Apr 11 20:25 workernode_map.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc    997828 Apr 11 20:26 agis_schedconf.cvmfs.json
[2026-04-12 00:43:41] drwx------. 5 boinc boinc      4096 Apr 11 20:26 pilot3
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc 193314274 Apr 12 00:41 HITS.49263208._035652.pool.root.1
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc       488 Apr 12 00:41 boinc_task_state.xml
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc      1011 Apr 12 00:42 memory_monitor_summary.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc   1511579 Apr 12 00:42 agis_ddmendpoints.agis.ALL.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc    398206 Apr 12 00:42 log.49263208._035652.job.log.tgz.1
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc      6334 Apr 12 00:42 heartbeat_new.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc      6225 Apr 12 00:42 heartbeat.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc        95 Apr 12 00:43 pilot_heartbeat.json
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc      4879 Apr 12 00:43 pilotlog.txt
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc   1421130 Apr 12 00:43 log.49263208._035652.job.log.1
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc        28 Apr 12 00:43 wrapper_checkpoint.txt
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc       357 Apr 12 00:43 output.list
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc      8192 Apr 12 00:43 boinc_mmap_file
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc       410 Apr 12 00:43 runtime_log
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc   1832960 Apr 12 00:43 result.tar.gz
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc      8438 Apr 12 00:43 runtime_log.err
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc       655 Apr 12 00:43 fc1c2eaa4471.diag
[2026-04-12 00:43:41] -rw-r--r--. 1 boinc boinc     20561 Apr 12 00:43 stderr.txt
[2026-04-12 00:43:41] HITS file was successfully produced:
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc 193314274 Apr 12 00:41 shared/HITS.pool.root.1
[2026-04-12 00:43:41]  *** Contents of shared directory: ***
[2026-04-12 00:43:41] total 408268
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc 222237363 Apr 11 20:19 ATLAS.root_0
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc     15665 Apr 11 20:19 start_atlas.sh
[2026-04-12 00:43:41] -rw-r--r--. 2 boinc boinc    656930 Apr 11 20:19 input.tar.gz
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc 193314274 Apr 12 00:41 HITS.pool.root.1
[2026-04-12 00:43:41] -rw-------. 1 boinc boinc   1832960 Apr 12 00:43 result.tar.gz
00:43:43 (12307): run_atlas exited; CPU time 57093.004003
00:43:43 (12307): called boinc_finish(0)

</stderr_txt>
]]>

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