Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-11 09:19:51 (39856): vboxwrapper version 26210
2026-04-11 09:19:51 (39856): BOINC client version: 8.2.9
2026-04-11 09:19:51 (39856): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-04-11 09:19:52 (39856): Successfully copied 'init_data.xml' to the shared directory.
2026-04-11 09:19:52 (39856): Create VM. (boinc_fd11d4f920398f12, slot#0)
2026-04-11 09:19:52 (39856): Setting Memory Size for VM. (4600MB)
2026-04-11 09:19:53 (39856): Setting CPU Count for VM. (6)
2026-04-11 09:19:53 (39856): Setting Chipset Options for VM.
2026-04-11 09:19:53 (39856): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-11 09:19:53 (39856): Setting Boot Options for VM.
2026-04-11 09:19:54 (39856): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-11 09:19:54 (39856): Enabling VM Network Access.
2026-04-11 09:19:55 (39856): Disabling USB Support for VM.
2026-04-11 09:19:55 (39856): Disabling COM Port Support for VM.
2026-04-11 09:19:55 (39856): Disabling LPT Port Support for VM.
2026-04-11 09:19:55 (39856): Disabling Audio Support for VM.
2026-04-11 09:19:56 (39856): Disabling Clipboard Support for VM.
2026-04-11 09:19:56 (39856): Disabling Drag and Drop Support for VM.
2026-04-11 09:19:56 (39856): Adding storage controller(s) to VM.
2026-04-11 09:19:56 (39856): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-11 09:19:58 (39856): Adding VirtualBox Guest Additions to VM.
2026-04-11 09:19:59 (39856): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-11 09:19:59 (39856): forwarding host port 49640 to guest port 80
2026-04-11 09:19:59 (39856): Enabling remote desktop for VM.
2026-04-11 09:20:00 (39856): Required extension pack not installed, remote desktop not enabled.
2026-04-11 09:20:00 (39856): Enabling shared directory for VM.
2026-04-11 09:20:00 (39856): Starting VM using VBoxManage interface. (boinc_fd11d4f920398f12, slot#0)
2026-04-11 09:20:06 (39856): Successfully started VM. (PID = '17780')
2026-04-11 09:20:06 (39856): Reporting VM Process ID to BOINC.
2026-04-11 09:20:06 (39856): Guest Log: BIOS: VirtualBox 7.1.6
2026-04-11 09:20:06 (39856): Guest Log: CPUID EDX: 0x178bfbff
2026-04-11 09:20:06 (39856): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-11 09:20:06 (39856): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-11 09:20:06 (39856): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-11 09:20:06 (39856): Detected: Web Application Enabled (http://localhost:49640)
2026-04-11 09:20:06 (39856): Preference change detected
2026-04-11 09:20:06 (39856): Setting CPU throttle for VM. (100%)
2026-04-11 09:20:06 (39856): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-11 09:20:08 (39856): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-11 09:20:08 (39856): Guest Log: BIOS: Booting from Hard Disk...
2026-04-11 09:20:10 (39856): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-11 09:20:10 (39856): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-11 09:20:10 (39856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-11 09:20:16 (39856): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-11 09:20:16 (39856): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-11 09:20:22 (39856): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000061 main     Log opened 2026-04-11T09:20:19.953343000Z
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000130 main     OS Product: Linux
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000156 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000296 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000296 main     Process ID: 1343
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000296 main     Package type: LINUX_64BITS_GENERIC
2026-04-11 09:20:22 (39856): Guest Log: 00:00:00.000904 main     5.2.32 r132073 started. Verbose level = 0
2026-04-11 09:20:22 (39856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-11 09:20:22 (39856): Guest Log: [INFO] Mounting shared directory
2026-04-11 09:20:22 (39856): Guest Log: [INFO] Checking for init_data.xml
2026-04-11 09:20:32 (39856): Guest Log: 00:00:10.002882 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 819 127 000ns (GuestNow=1 775 892 031 136 005 000 ns GuestLast=1 775 899 219 955 132 000 ns fSetTimeLastLoop=true )
2026-04-11 09:20:54 (39856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-11 09:20:54 (39856): Guest Log: [INFO] Detected branch: prod
2026-04-11 09:20:54 (39856): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-11 09:20:54 (39856): Guest Log: Copying input files
2026-04-11 09:20:54 (39856): Guest Log: Copied input files into RunAtlas.
2026-04-11 09:20:54 (39856): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-11 09:20:54 (39856): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-11 09:20:54 (39856): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-11 09:20:54 (39856): Guest Log: Further information can be found at the LHC@home message board.
2026-04-11 09:21:19 (39856): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-11 09:21:19 (39856): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-11 09:21:19 (39856): Guest Log: 2.6.3.0 1627 0 29564 158336 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
2026-04-11 09:21:20 (39856): Guest Log: copied the webapp to /var/www
2026-04-11 09:21:20 (39856): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-11 09:21:20 (39856): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-11 09:21:20 (39856): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-11 09:21:20 (39856): Guest Log:  *** Starting ATLAS job. (PandaID=7086869410 taskID=49645815) ***
2026-04-11 11:00:08 (39856): Status Report: Elapsed Time: '6000.000000'
2026-04-11 11:00:08 (39856): Status Report: CPU Time: '29899.375000'
2026-04-11 11:37:14 (39856): Guest Log:  *** Job finished ***
2026-04-11 11:37:14 (39856): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:36:32,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:36:32,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:36:59,562 | INFO     | [monitor] cgroup control has ended
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:01,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428092434240)>', '<ExcThread(monitor, started 140427302790912)>']
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:01,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:01,695 | INFO     | [monitor] control thread has ended
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,509 | INFO     | all workflow threads have been joined
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,509 | INFO     | end of generic workflow (traces error code: 0)
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,509 | INFO     | traces error code: 0
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,582 [wrapper] ==== pilot stdout END ====
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,586 [wrapper] ==== wrapper stdout RESUME ====
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,590 [wrapper] pilotpid: 6089
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:06,593 [wrapper] Pilot exit status: 0
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,563 [wrapper] pandaids: 7086869410
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,590 [wrapper] cleanup supervisor_pilot 26049 6090
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,594 [wrapper] Test setup, not cleaning
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,598 [wrapper] apfmon messages muted
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,601 [wrapper] ==== wrapper stdout END ====
2026-04-11 11:37:14 (39856): Guest Log: 2026-04-11 09:37:09,603 [wrapper] ==== wrapper stderr END ====
2026-04-11 11:37:14 (39856): Guest Log:  *** Error codes and diagnostics ***
2026-04-11 11:37:14 (39856): Guest Log:     "exeErrorCode": 0,
2026-04-11 11:37:14 (39856): Guest Log:     "pilotErrorCode": 0,
2026-04-11 11:37:14 (39856): Guest Log:  *** Listing of results directory ***
2026-04-11 11:37:14 (39856): Guest Log: total 204148
2026-04-11 11:37:14 (39856): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 11 03:16 pilot3.tar.gz
2026-04-11 11:37:14 (39856): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 11 03:19 queuedata.json
2026-04-11 11:37:14 (39856): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 11 03:20 runpilot2-wrapper.sh
2026-04-11 11:37:14 (39856): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 11 07:20 start_atlas.sh
2026-04-11 11:37:14 (39856): Guest Log: -rwxr-xr-x. 1 atlas atlas    656938 Apr 11 07:20 input.tar.gz
2026-04-11 11:37:14 (39856): Guest Log: -rwxr-xr-x. 1 atlas atlas      8770 Apr 11 07:20 init_data.xml
2026-04-11 11:37:14 (39856): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 11 07:20 EVNT.48629115._000036.pool.root.1 -> /data/./ATLAS.root_0
2026-04-11 11:37:14 (39856): Guest Log: -rw-r--r--. 1 atlas atlas      2625 Apr 11 07:21 pandaJob.out
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas    997844 Apr 11 07:24 agis_schedconf.cvmfs.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 11 07:24 agis_ddmendpoints.agis.ALL.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas       415 Apr 11 07:24 workernode_map.json
2026-04-11 11:37:14 (39856): Guest Log: drwx------. 5 atlas atlas      4096 Apr 11 07:24 pilot3
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas 202967709 Apr 11 09:35 HITS.49645815._000895.pool.root.1
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 11 09:35 memory_monitor_summary.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas        95 Apr 11 09:35 pilot_heartbeat.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas    311376 Apr 11 09:35 log.49645815._000895.job.log.tgz.1
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas      6314 Apr 11 09:35 heartbeat_new.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas      6205 Apr 11 09:35 heartbeat.json
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas      4872 Apr 11 09:37 pilotlog.txt
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas    731960 Apr 11 09:37 log.49645815._000895.job.log.1
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas       357 Apr 11 09:37 output.list
2026-04-11 11:37:14 (39856): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 11 09:37 runtime_log
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas   1064960 Apr 11 09:37 result.tar.gz
2026-04-11 11:37:14 (39856): Guest Log: -rw-r--r--. 1 atlas atlas      8366 Apr 11 09:37 runtime_log.err
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas       656 Apr 11 09:37 bded349ef93a.diag
2026-04-11 11:37:14 (39856): Guest Log: Looking for outputfile HITS.49645815._000895.pool.root.1
2026-04-11 11:37:14 (39856): Guest Log: HITS file was successfully produced
2026-04-11 11:37:14 (39856): Guest Log: -rw-------. 1 atlas atlas 202967709 Apr 11 09:35 /home/atlas/RunAtlas/HITS.49645815._000895.pool.root.1
2026-04-11 11:37:15 (39856): Guest Log: Successfully finished the ATLAS job!
2026-04-11 11:37:15 (39856): Guest Log: Copying the results back to the shared directory!
2026-04-11 11:37:16 (39856): Guest Log:  *** Contents of shared directory: ***
2026-04-11 11:37:16 (39856): Guest Log: total 423196
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root 228628142 Apr 11 07:19 ATLAS.root_0
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root 202967709 Apr 11  2026 HITS.pool.root.1
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root      8770 Apr 11 07:19 init_data.xml
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root    656938 Apr 11 04:59 input.tar.gz
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root   1064960 Apr 11  2026 result.tar.gz
2026-04-11 11:37:16 (39856): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 11 04:59 start_atlas.sh
2026-04-11 11:37:16 (39856): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-11 11:37:16 (39856): VM Completion File Detected.
2026-04-11 11:37:16 (39856): Powering off VM.
2026-04-11 11:37:16 (39856): Successfully stopped VM.
2026-04-11 11:37:16 (39856): Deregistering VM. (boinc_fd11d4f920398f12, slot#0)
2026-04-11 11:37:16 (39856): Removing network bandwidth throttle group from VM.
2026-04-11 11:37:16 (39856): Removing VM from VirtualBox.
2026-04-11 11:37:22 (39856): called boinc_finish(0)

</stderr_txt>
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