Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:06:27 (24187): wrapper (7.7.26015): starting
14:06:27 (24187): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 14:06:27] Arguments: --nthreads 8
[2026-04-11 14:06:27] Threads: 8
[2026-04-11 14:06:27] Checking for CVMFS
[2026-04-11 14:06:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 14:06:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 14:06:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 14:06:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 14:06:31] 2.11.2.0 4392 14292 101652 158343 1 255 21259800 25165825 4638 130560 0 5116380 99.954 1398440 4673 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-11 14:06:31] CVMFS is ok
[2026-04-11 14:06:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 14:06:31] Checking for apptainer binary...
[2026-04-11 14:06:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 14:06:31] Running /usr/bin/apptainer --version
[2026-04-11 14:06:31] apptainer version 1.3.2-1.el7
[2026-04-11 14:06:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 14:06:38] cg-vwn449.simple-grid.lan
[2026-04-11 14:06:38] apptainer works
[2026-04-11 14:06:38] Set ATHENA_PROC_NUMBER=8
[2026-04-11 14:06:38] Set ATHENA_CORE_NUMBER=8
[2026-04-11 14:06:38] Starting ATLAS job with PandaID=7086850434
[2026-04-11 14:06:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 18:55:25]  *** The last 200 lines of the pilot log: ***
[2026-04-11 18:55:25] 2026-04-11 16:54:37,402 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,402 | INFO     | log transfer has been attempted: DONE
[2026-04-11 18:55:25] 2026-04-11 16:54:37,402 | INFO     | job 7086850434 has finished - writing final server update
[2026-04-11 18:55:25] 2026-04-11 16:54:37,403 | INFO     | total number of processed events: 400 (read)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,405 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7086850434/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,406 | INFO     | extracted standard info from prmon json
[2026-04-11 18:55:25] 2026-04-11 16:54:37,406 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 18:55:25] 2026-04-11 16:54:37,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 18:55:25] 2026-04-11 16:54:37,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 18:55:25] 2026-04-11 16:54:37,412 | INFO     | fitting pss+swap vs Time
[2026-04-11 18:55:25] 2026-04-11 16:54:37,413 | INFO     | sum of square deviations: 6378584712.5
[2026-04-11 18:55:25] 2026-04-11 16:54:37,416 | INFO     | sum of deviations: 59119846562.50001
[2026-04-11 18:55:25] 2026-04-11 16:54:37,416 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,416 | INFO     | mean y: 2479694.9744525547
[2026-04-11 18:55:25] 2026-04-11 16:54:37,416 | INFO     | intersect: 2479694.9744525547
[2026-04-11 18:55:25] 2026-04-11 16:54:37,417 | INFO     | chi2: 7.295074821018343
[2026-04-11 18:55:25] 2026-04-11 16:54:37,417 | INFO     | sum of square deviations: 6035722470.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,424 | INFO     | sum of deviations: 76331017820.99998
[2026-04-11 18:55:25] 2026-04-11 16:54:37,424 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,425 | INFO     | mean y: 2487230.342007435
[2026-04-11 18:55:25] 2026-04-11 16:54:37,425 | INFO     | intersect: 2487230.342007435
[2026-04-11 18:55:25] 2026-04-11 16:54:37,425 | INFO     | chi2: 6.583875025778102
[2026-04-11 18:55:25] 2026-04-11 16:54:37,425 | INFO     | current chi2=6.583875025778102 (change=9.749040451115782 %)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,426 | INFO     | right removable region: 268
[2026-04-11 18:55:25] 2026-04-11 16:54:37,426 | INFO     | sum of square deviations: 6035722470.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,429 | INFO     | sum of deviations: -37180925265.000015
[2026-04-11 18:55:25] 2026-04-11 16:54:37,429 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,429 | INFO     | mean y: 2522497.349442379
[2026-04-11 18:55:25] 2026-04-11 16:54:37,429 | INFO     | intersect: 2522497.349442379
[2026-04-11 18:55:25] 2026-04-11 16:54:37,430 | INFO     | chi2: 2.4752326291542976
[2026-04-11 18:55:25] 2026-04-11 16:54:37,430 | INFO     | current chi2=2.4752326291542976 (change=66.06981162108531 %)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,431 | INFO     | sum of square deviations: 5705372090.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,433 | INFO     | sum of deviations: -84444714563.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,433 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,434 | INFO     | mean y: 2544199.106060606
[2026-04-11 18:55:25] 2026-04-11 16:54:37,434 | INFO     | intersect: 2544199.106060606
[2026-04-11 18:55:25] 2026-04-11 16:54:37,434 | INFO     | chi2: 1.0495349603032431
[2026-04-11 18:55:25] 2026-04-11 16:54:37,434 | INFO     | current chi2=1.0495349603032431 (change=57.59853243927891 %)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,435 | INFO     | sum of square deviations: 5387301010.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,437 | INFO     | sum of deviations: -85871841405.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,438 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,438 | INFO     | mean y: 2544854.2664092663
[2026-04-11 18:55:25] 2026-04-11 16:54:37,438 | INFO     | intersect: 2544854.2664092663
[2026-04-11 18:55:25] 2026-04-11 16:54:37,438 | INFO     | chi2: 1.0195042125273706
[2026-04-11 18:55:25] 2026-04-11 16:54:37,439 | INFO     | current chi2=1.0195042125273706 (change=2.8613384891148117 %)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,439 | INFO     | left removable region: 15
[2026-04-11 18:55:25] 2026-04-11 16:54:37,439 | INFO     | sum of square deviations: 5021496942.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,442 | INFO     | sum of deviations: -66742198949.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,442 | INFO     | mean x (centered): 0.0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,442 | INFO     | mean y: 2554256.177865613
[2026-04-11 18:55:25] 2026-04-11 16:54:37,442 | INFO     | intersect: 2554256.177865613
[2026-04-11 18:55:25] 2026-04-11 16:54:37,443 | INFO     | chi2: 0.2304415232215836
[2026-04-11 18:55:25] 2026-04-11 16:54:37,443 | INFO     | current memory leak: -13.29 B/s (using 253 data points, chi2=0.23)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | ..............................
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . Timing measurements:
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . get job = 0 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . initial setup = 103 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . payload setup = 142 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . stage-in = 0 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,444 | INFO     | . payload execution = 16805 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,445 | INFO     | . stage-out = 4 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,445 | INFO     | . log creation = 1 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,445 | INFO     | ..............................
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | 
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | job summary report
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | --------------------------------------------------
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | PanDA job id: 7086850434
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | task id: 49263208
[2026-04-11 18:55:25] 2026-04-11 16:54:37,609 | INFO     | errors: (none)
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | pilot state: finished 
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | transexitcode: 0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | exeerrorcode: 0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | exeerrordiag: 
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | exitcode: 0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,617 | INFO     | exitmsg: OK
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | cpuconsumptiontime: 64546 s
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | nevents: 400
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | neventsw: 0
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | pid: 32719
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | pgrp: 32719
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | corecount: 8
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | event service: False
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | sizes: {0: 2279605, 1: 2255953, 2: 2281518, 12: 2281518, 16952: 2313379, 16958: 2322589, 16960: 2322727}
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | --------------------------------------------------
[2026-04-11 18:55:25] 2026-04-11 16:54:37,618 | INFO     | 
[2026-04-11 18:55:25] 2026-04-11 16:54:37,619 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-11 18:55:25] 2026-04-11 16:54:38,188 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 18:55:25] 2026-04-11 16:54:38,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,191 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 18:55:25] 2026-04-11 16:54:38,191 | INFO     | job 7086850434 has completed (purged errors)
[2026-04-11 18:55:25] 2026-04-11 16:54:38,191 | INFO     | overall cleanup function is called
[2026-04-11 18:55:25] 2026-04-11 16:54:39,199 | INFO     | --- collectZombieJob: --- 10, [32719]
[2026-04-11 18:55:25] 2026-04-11 16:54:39,199 | INFO     | zombie collector waiting for pid 32719
[2026-04-11 18:55:25] 2026-04-11 16:54:39,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 18:55:25] 2026-04-11 16:54:39,199 | INFO     | collected zombie processes
[2026-04-11 18:55:25] 2026-04-11 16:54:39,199 | INFO     | will attempt to kill all subprocesses of pid=32719
[2026-04-11 18:55:25] 2026-04-11 16:54:39,311 | INFO     | process IDs to be killed: [32719] (in reverse order)
[2026-04-11 18:55:25] 2026-04-11 16:54:39,952 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 18:55:25] 2026-04-11 16:54:39,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 18:55:25] 2026-04-11 16:54:39,956 | INFO     | did not find any defunct processes belonging to 32719
[2026-04-11 18:55:25] 2026-04-11 16:54:39,959 | INFO     | did not find any defunct processes belonging to 32719
[2026-04-11 18:55:25] 2026-04-11 16:54:39,959 | INFO     | Ready for new job
[2026-04-11 18:55:25] 2026-04-11 16:54:39,961 | INFO     | **************************************
[2026-04-11 18:55:25] 2026-04-11 16:54:39,961 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 18:55:25] 2026-04-11 16:54:39,961 | INFO     | **************************************
[2026-04-11 18:55:25] 2026-04-11 16:54:39,961 | INFO     | 
[2026-04-11 18:55:25] 2026-04-11 16:54:39,962 | INFO     | pilot is running in a VM
[2026-04-11 18:55:25] 2026-04-11 16:54:39,962 | INFO     | architecture information:
[2026-04-11 18:55:25] 2026-04-11 16:54:39,972 | INFO     | executing command: cat /etc/os-release
[2026-04-11 18:55:25] 2026-04-11 16:54:40,291 | INFO     | cat /etc/os-release:
[2026-04-11 18:55:25] NAME="CentOS Linux"
[2026-04-11 18:55:25] VERSION="7 (Core)"
[2026-04-11 18:55:25] ID="centos"
[2026-04-11 18:55:25] ID_LIKE="rhel fedora"
[2026-04-11 18:55:25] VERSION_ID="7"
[2026-04-11 18:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 18:55:25] ANSI_COLOR="0;31"
[2026-04-11 18:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 18:55:25] HOME_URL="https://www.centos.org/"
[2026-04-11 18:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 18:55:25] 
[2026-04-11 18:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 18:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 18:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 18:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 18:55:25] 
[2026-04-11 18:55:25] 2026-04-11 16:54:40,292 | INFO     | **************************************
[2026-04-11 18:55:25] 2026-04-11 16:54:40,795 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-11 18:55:25] 2026-04-11 16:54:40,968 | INFO     | sufficient remaining disk space (496739811328 B)
[2026-04-11 18:55:25] 2026-04-11 16:54:40,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 18:55:25] 2026-04-11 16:54:40,968 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 18:55:25] 2026-04-11 16:54:40,968 | INFO     | update_server=False
[2026-04-11 18:55:25] 2026-04-11 16:54:40,968 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 18:55:25] 2026-04-11 16:54:40,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 18:55:25] 2026-04-11 16:54:40,969 | INFO     | aborting loop
[2026-04-11 18:55:25] 2026-04-11 16:54:41,079 | INFO     | all data control threads have been joined
[2026-04-11 18:55:25] 2026-04-11 16:54:41,460 | INFO     | all payload control threads have been joined
[2026-04-11 18:55:25] 2026-04-11 16:54:41,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 18:55:25] 2026-04-11 16:54:41,944 | INFO     | all job control threads have been joined
[2026-04-11 18:55:25] 2026-04-11 16:54:41,975 | INFO     | [job] retrieve thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:41,976 | INFO     | [job] job monitor thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,019 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,085 | INFO     | [data] control thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,280 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,351 | INFO     | [job] validate thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 18:55:25] 2026-04-11 16:54:42,466 | INFO     | [payload] control thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,549 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,624 | INFO     | [data] copytool_in thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 18:55:25] 2026-04-11 16:54:42,817 | INFO     | [payload] validate_post thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:42,950 | INFO     | [job] control thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:43,401 | INFO     | [payload] failed_post thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:43,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:43,632 | INFO     | [job] queue monitor thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:43,716 | INFO     | [data] copytool_out thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:54:46,382 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 18:55:25] 2026-04-11 16:55:05,475 [wrapper] supervise_pilot (15 min periods counter: 20)
[2026-04-11 18:55:25] 2026-04-11 16:55:11,187 | INFO     | PID=28195 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-11 18:55:25] 2026-04-11 16:55:11,187 | INFO     | .. there are 9 such processes running
[2026-04-11 18:55:25] 2026-04-11 16:55:11,187 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 18:55:25] 2026-04-11 16:55:11,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 18:55:25] 2026-04-11 16:55:11,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 18:55:25] 2026-04-11 16:55:14,423 | INFO     | [monitor] cgroup control has ended
[2026-04-11 18:55:25] 2026-04-11 16:55:16,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140705833424704)>', '<ExcThread(monitor, started 140704730834688)>']
[2026-04-11 18:55:25] 2026-04-11 16:55:16,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 18:55:25] 2026-04-11 16:55:16,218 | INFO     | [monitor] control thread has ended
[2026-04-11 18:55:25] 2026-04-11 16:55:21,082 | INFO     | all workflow threads have been joined
[2026-04-11 18:55:25] 2026-04-11 16:55:21,082 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 18:55:25] 2026-04-11 16:55:21,082 | INFO     | traces error code: 0
[2026-04-11 18:55:25] 2026-04-11 16:55:21,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 18:55:25] 2026-04-11 16:55:21,549 [wrapper] ==== pilot stdout END ====
[2026-04-11 18:55:25] 2026-04-11 16:55:21,643 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 18:55:25] 2026-04-11 16:55:21,739 [wrapper] pilotpid: 28195
[2026-04-11 18:55:25] 2026-04-11 16:55:21,828 [wrapper] Pilot exit status: 0
[2026-04-11 18:55:25] 2026-04-11 16:55:22,251 [wrapper] pandaids: 7086850434
[2026-04-11 18:55:25] 2026-04-11 16:55:23,020 [wrapper] cleanup supervisor_pilot  9245 28196
[2026-04-11 18:55:25] 2026-04-11 16:55:23,132 [wrapper] Test setup, not cleaning
[2026-04-11 18:55:25] 2026-04-11 16:55:23,186 [wrapper] apfmon messages muted
[2026-04-11 18:55:25] 2026-04-11 16:55:23,243 [wrapper] ==== wrapper stdout END ====
[2026-04-11 18:55:25] 2026-04-11 16:55:23,354 [wrapper] ==== wrapper stderr END ====
[2026-04-11 18:55:25]  *** Error codes and diagnostics ***
[2026-04-11 18:55:25]     "exeErrorCode": 0,
[2026-04-11 18:55:25]     "pilotErrorCode": 0,
[2026-04-11 18:55:25]  *** Listing of results directory ***
[2026-04-11 18:55:25] total 424316
[2026-04-11 18:55:25] -rwx------. 1 boinc boinc     36322 Apr 11 02:37 runpilot2-wrapper.sh
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc    644190 Apr 11 02:39 pilot3.tar.gz
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc      5094 Apr 11 02:42 queuedata.json
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc       100 Apr 11 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 18:55:25] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 14:06 run_atlas
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc       105 Apr 11 14:06 job.xml
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc      6307 Apr 11 14:06 init_data.xml
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc 226276693 Apr 11 14:06 EVNT.49263206._000080.pool.root.1
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc     15665 Apr 11 14:06 start_atlas.sh
[2026-04-11 18:55:25] drwxrwx--x. 2 boinc boinc        68 Apr 11 14:06 shared
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc    656930 Apr 11 14:06 input.tar.gz
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc         0 Apr 11 14:06 boinc_lockfile
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc      2572 Apr 11 14:06 pandaJob.out
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc       415 Apr 11 14:11 workernode_map.json
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc    997828 Apr 11 14:11 agis_schedconf.cvmfs.json
[2026-04-11 18:55:25] drwx------. 5 boinc boinc      4096 Apr 11 14:11 pilot3
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc 200254582 Apr 11 18:53 HITS.49263208._032606.pool.root.1
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc       488 Apr 11 18:53 boinc_task_state.xml
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc      1013 Apr 11 18:54 memory_monitor_summary.json
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc        95 Apr 11 18:54 pilot_heartbeat.json
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc   1511579 Apr 11 18:54 agis_ddmendpoints.agis.ALL.json
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc    419430 Apr 11 18:54 log.49263208._032606.job.log.tgz.1
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc      6336 Apr 11 18:54 heartbeat_new.json
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc      6227 Apr 11 18:54 heartbeat.json
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc        28 Apr 11 18:55 wrapper_checkpoint.txt
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc      8192 Apr 11 18:55 boinc_mmap_file
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc      4879 Apr 11 18:55 pilotlog.txt
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc   1540789 Apr 11 18:55 log.49263208._032606.job.log.1
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc       357 Apr 11 18:55 output.list
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc       410 Apr 11 18:55 runtime_log
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc   1976320 Apr 11 18:55 result.tar.gz
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc      8438 Apr 11 18:55 runtime_log.err
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc       656 Apr 11 18:55 97ac0ec6f976.diag
[2026-04-11 18:55:25] -rw-r--r--. 1 boinc boinc     20615 Apr 11 18:55 stderr.txt
[2026-04-11 18:55:25] HITS file was successfully produced:
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc 200254582 Apr 11 18:53 shared/HITS.pool.root.1
[2026-04-11 18:55:25]  *** Contents of shared directory: ***
[2026-04-11 18:55:25] total 419132
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc 226276693 Apr 11 14:06 ATLAS.root_0
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc     15665 Apr 11 14:06 start_atlas.sh
[2026-04-11 18:55:25] -rw-r--r--. 2 boinc boinc    656930 Apr 11 14:06 input.tar.gz
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc 200254582 Apr 11 18:53 HITS.pool.root.1
[2026-04-11 18:55:25] -rw-------. 1 boinc boinc   1976320 Apr 11 18:55 result.tar.gz
18:55:27 (24187): run_atlas exited; CPU time 64827.418636
18:55:27 (24187): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN