Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:10:13 (3650): wrapper (7.7.26015): starting
02:10:13 (3650): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 02:10:13] Arguments: --nthreads 4
[2026-04-11 02:10:13] Threads: 4
[2026-04-11 02:10:13] Checking for CVMFS
[2026-04-11 02:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 02:10:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 02:10:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 02:10:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 02:10:43] 2.12.7.0 3872 0 25188 158325 3 1 2555211 4194305 0 130560 0 0 0.000 1337 4427 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-11 02:10:43] CVMFS is ok
[2026-04-11 02:10:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 02:10:43] Checking for apptainer binary...
[2026-04-11 02:10:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 02:10:43] Running /usr/bin/apptainer --version
[2026-04-11 02:10:44] apptainer version 1.0.3
[2026-04-11 02:10:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 02:10:44] TeeC02
[2026-04-11 02:10:44] apptainer works
[2026-04-11 02:10:44] Set ATHENA_PROC_NUMBER=4
[2026-04-11 02:10:44] Set ATHENA_CORE_NUMBER=4
[2026-04-11 02:10:44] Starting ATLAS job with PandaID=7085604027
[2026-04-11 02:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 05:14:49]  *** The last 200 lines of the pilot log: ***
[2026-04-11 05:14:49] 2026-04-11 04:14:18,496 | INFO     | stage-out finished correctly
[2026-04-11 05:14:49] 2026-04-11 04:14:18,734 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 05:14:49] 2026-04-11 04:14:18,958 | INFO     | monitor loop #828: job 0:7085604027 is in state 'finished'
[2026-04-11 05:14:49] 2026-04-11 04:14:18,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,154 | INFO     | job 7085604027 has state=finished
[2026-04-11 05:14:49] 2026-04-11 04:14:20,154 | INFO     | preparing for final server update for job 7085604027 in state='finished'
[2026-04-11 05:14:49] 2026-04-11 04:14:20,155 | INFO     | reading metadata from: /home/m/BOINC/slots/1/PanDA_Pilot-7085604027/jobReport.json
[2026-04-11 05:14:49] 2026-04-11 04:14:20,159 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/1/workernode_map.json
[2026-04-11 05:14:49] 2026-04-11 04:14:20,159 | INFO     | this job has now completed (state=finished)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,159 | INFO     | log transfer has been attempted: DONE
[2026-04-11 05:14:49] 2026-04-11 04:14:20,159 | INFO     | job 7085604027 has finished - writing final server update
[2026-04-11 05:14:49] 2026-04-11 04:14:20,160 | INFO     | total number of processed events: 400 (read)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,180 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7085604027/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,181 | INFO     | extracted standard info from prmon json
[2026-04-11 05:14:49] 2026-04-11 04:14:20,181 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 05:14:49] 2026-04-11 04:14:20,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 05:14:49] 2026-04-11 04:14:20,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 05:14:49] 2026-04-11 04:14:20,188 | INFO     | fitting pss+swap vs Time
[2026-04-11 05:14:49] 2026-04-11 04:14:20,189 | INFO     | sum of square deviations: 1748737904.5
[2026-04-11 05:14:49] 2026-04-11 04:14:20,191 | INFO     | sum of deviations: -32206603588.000008
[2026-04-11 05:14:49] 2026-04-11 04:14:20,191 | INFO     | mean x (centered): 0.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,191 | INFO     | mean y: 2403613.853932584
[2026-04-11 05:14:49] 2026-04-11 04:14:20,192 | INFO     | intersect: 2403613.853932584
[2026-04-11 05:14:49] 2026-04-11 04:14:20,192 | INFO     | chi2: 3.5070008767621452
[2026-04-11 05:14:49] 2026-04-11 04:14:20,193 | INFO     | sum of square deviations: 1605470102.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,195 | INFO     | sum of deviations: -20318006147.999996
[2026-04-11 05:14:49] 2026-04-11 04:14:20,195 | INFO     | mean x (centered): 0.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,196 | INFO     | mean y: 2416020.456647399
[2026-04-11 05:14:49] 2026-04-11 04:14:20,196 | INFO     | intersect: 2416020.456647399
[2026-04-11 05:14:49] 2026-04-11 04:14:20,196 | INFO     | chi2: 2.8708847856877884
[2026-04-11 05:14:49] 2026-04-11 04:14:20,196 | INFO     | current chi2=2.8708847856877884 (change=18.13846398754408 %)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,197 | INFO     | right removable region: 172
[2026-04-11 05:14:49] 2026-04-11 04:14:20,197 | INFO     | sum of square deviations: 1605470102.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,199 | INFO     | sum of deviations: -69740021562.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,199 | INFO     | mean x (centered): 0.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,200 | INFO     | mean y: 2443179.971098266
[2026-04-11 05:14:49] 2026-04-11 04:14:20,200 | INFO     | intersect: 2443179.971098266
[2026-04-11 05:14:49] 2026-04-11 04:14:20,200 | INFO     | chi2: 0.9973325064833705
[2026-04-11 05:14:49] 2026-04-11 04:14:20,200 | INFO     | current chi2=0.9973325064833705 (change=71.56166931431844 %)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,201 | INFO     | sum of square deviations: 1470248962.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,203 | INFO     | sum of deviations: -64061235742.50003
[2026-04-11 05:14:49] 2026-04-11 04:14:20,203 | INFO     | mean x (centered): 0.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,203 | INFO     | mean y: 2436749.6726190476
[2026-04-11 05:14:49] 2026-04-11 04:14:20,203 | INFO     | intersect: 2436749.6726190476
[2026-04-11 05:14:49] 2026-04-11 04:14:20,204 | INFO     | chi2: 0.9947112967343972
[2026-04-11 05:14:49] 2026-04-11 04:14:20,204 | INFO     | current chi2=0.9947112967343972 (change=0.26282205101443684 %)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,204 | INFO     | left removable region: 10
[2026-04-11 05:14:49] 2026-04-11 04:14:20,205 | INFO     | sum of square deviations: 1318277740.5
[2026-04-11 05:14:49] 2026-04-11 04:14:20,206 | INFO     | sum of deviations: -51388992256.00001
[2026-04-11 05:14:49] 2026-04-11 04:14:20,206 | INFO     | mean x (centered): 0.0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,207 | INFO     | mean y: 2451665.6049382715
[2026-04-11 05:14:49] 2026-04-11 04:14:20,207 | INFO     | intersect: 2451665.6049382715
[2026-04-11 05:14:49] 2026-04-11 04:14:20,207 | INFO     | chi2: 0.3122354019361831
[2026-04-11 05:14:49] 2026-04-11 04:14:20,207 | INFO     | current memory leak: -38.98 B/s (using 162 data points, chi2=0.31)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | could have reported an average CPU frequency of 3109 MHz (10 samples)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | ..............................
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | . Timing measurements:
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | . get job = 0 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | . initial setup = 51 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | . payload setup = 8 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,208 | INFO     | . stage-in = 0 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,209 | INFO     | . payload execution = 10814 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,209 | INFO     | . stage-out = 14 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,209 | INFO     | . log creation = 0 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,209 | INFO     | ..............................
[2026-04-11 05:14:49] 2026-04-11 04:14:20,668 | INFO     | 
[2026-04-11 05:14:49] 2026-04-11 04:14:20,668 | INFO     | job summary report
[2026-04-11 05:14:49] 2026-04-11 04:14:20,668 | INFO     | --------------------------------------------------
[2026-04-11 05:14:49] 2026-04-11 04:14:20,668 | INFO     | PanDA job id: 7085604027
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | task id: 49263200
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | errors: (none)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | pilot state: finished 
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | transexitcode: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,669 | INFO     | exeerrorcode: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | exeerrordiag: 
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | exitcode: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | exitmsg: OK
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | cpuconsumptiontime: 41464 s
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | nevents: 400
[2026-04-11 05:14:49] 2026-04-11 04:14:20,670 | INFO     | neventsw: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | pid: 12345
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | pgrp: 12345
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | corecount: 4
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | event service: False
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | sizes: {0: 2281467, 10: 2281467, 10827: 2310556, 10842: 2319608, 10844: 2319746}
[2026-04-11 05:14:49] 2026-04-11 04:14:20,671 | INFO     | --------------------------------------------------
[2026-04-11 05:14:49] 2026-04-11 04:14:20,672 | INFO     | 
[2026-04-11 05:14:49] 2026-04-11 04:14:20,672 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-04-11 05:14:49] 2026-04-11 04:14:20,705 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,706 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,706 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | job 7085604027 has completed (purged errors)
[2026-04-11 05:14:49] 2026-04-11 04:14:20,709 | INFO     | overall cleanup function is called
[2026-04-11 05:14:49] 2026-04-11 04:14:21,367 | INFO     | PID=7957 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-11 05:14:49] 2026-04-11 04:14:21,716 | INFO     | --- collectZombieJob: --- 10, [12345]
[2026-04-11 05:14:49] 2026-04-11 04:14:21,717 | INFO     | zombie collector waiting for pid 12345
[2026-04-11 05:14:49] 2026-04-11 04:14:21,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 05:14:49] 2026-04-11 04:14:21,718 | INFO     | collected zombie processes
[2026-04-11 05:14:49] 2026-04-11 04:14:21,718 | INFO     | will attempt to kill all subprocesses of pid=12345
[2026-04-11 05:14:49] 2026-04-11 04:14:21,776 | INFO     | process IDs to be killed: [12345] (in reverse order)
[2026-04-11 05:14:49] 2026-04-11 04:14:21,805 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 05:14:49] 2026-04-11 04:14:21,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 05:14:49] 2026-04-11 04:14:21,807 | INFO     | did not find any defunct processes belonging to 12345
[2026-04-11 05:14:49] 2026-04-11 04:14:21,808 | INFO     | did not find any defunct processes belonging to 12345
[2026-04-11 05:14:49] 2026-04-11 04:14:21,808 | INFO     | Ready for new job
[2026-04-11 05:14:49] 2026-04-11 04:14:21,809 | INFO     | **************************************
[2026-04-11 05:14:49] 2026-04-11 04:14:21,809 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 05:14:49] 2026-04-11 04:14:21,809 | INFO     | **************************************
[2026-04-11 05:14:49] 2026-04-11 04:14:21,809 | INFO     | 
[2026-04-11 05:14:49] 2026-04-11 04:14:21,830 | INFO     | architecture information:
[2026-04-11 05:14:49] 2026-04-11 04:14:21,830 | INFO     | executing command: cat /etc/os-release
[2026-04-11 05:14:49] 2026-04-11 04:14:21,839 | INFO     | cat /etc/os-release:
[2026-04-11 05:14:49] NAME="CentOS Linux"
[2026-04-11 05:14:49] VERSION="7 (Core)"
[2026-04-11 05:14:49] ID="centos"
[2026-04-11 05:14:49] ID_LIKE="rhel fedora"
[2026-04-11 05:14:49] VERSION_ID="7"
[2026-04-11 05:14:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 05:14:49] ANSI_COLOR="0;31"
[2026-04-11 05:14:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 05:14:49] HOME_URL="https://www.centos.org/"
[2026-04-11 05:14:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 05:14:49] 
[2026-04-11 05:14:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 05:14:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 05:14:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 05:14:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 05:14:49] 
[2026-04-11 05:14:49] 2026-04-11 04:14:21,839 | INFO     | **************************************
[2026-04-11 05:14:49] 2026-04-11 04:14:22,343 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-04-11 05:14:49] 2026-04-11 04:14:22,354 | INFO     | sufficient remaining disk space (432613097472 B)
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | INFO     | update_server=False
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 05:14:49] 2026-04-11 04:14:22,355 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-11 05:14:49] 2026-04-11 04:14:22,356 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 05:14:49] 2026-04-11 04:14:22,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 05:14:49] 2026-04-11 04:14:22,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 05:14:49] 2026-04-11 04:14:22,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 05:14:49] 2026-04-11 04:14:22,468 | INFO     | aborting loop
[2026-04-11 05:14:49] 2026-04-11 04:14:23,041 | INFO     | all data control threads have been joined
[2026-04-11 05:14:49] 2026-04-11 04:14:23,109 | INFO     | all payload control threads have been joined
[2026-04-11 05:14:49] 2026-04-11 04:14:23,311 | INFO     | all job control threads have been joined
[2026-04-11 05:14:49] 2026-04-11 04:14:23,361 | INFO     | [job] retrieve thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:23,368 | INFO     | [payload] validate_post thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:23,473 | INFO     | [job] job monitor thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:23,496 | INFO     | [data] copytool_in thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:23,619 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:23,859 | INFO     | [payload] failed_post thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,047 | INFO     | [data] control thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,115 | INFO     | [payload] control thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,262 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,317 | INFO     | [job] control thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,362 | INFO     | [data] copytool_out thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,477 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,478 | INFO     | [job] validate thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:24,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 05:14:49] 2026-04-11 04:14:24,793 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:25,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 05:14:49] 2026-04-11 04:14:26,276 | INFO     | [job] queue monitor thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:28,797 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 05:14:49] 2026-04-11 04:14:43,335 | INFO     | [monitor] cgroup control has ended
[2026-04-11 05:14:49] 2026-04-11 04:14:43,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655335249728)>', '<ExcThread(monitor, started 140654676014848)>']
[2026-04-11 05:14:49] 2026-04-11 04:14:44,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 05:14:49] 2026-04-11 04:14:44,461 | INFO     | [monitor] control thread has ended
[2026-04-11 05:14:49] 2026-04-11 04:14:48,999 | INFO     | all workflow threads have been joined
[2026-04-11 05:14:49] 2026-04-11 04:14:48,999 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 05:14:49] 2026-04-11 04:14:49,000 | INFO     | traces error code: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:49,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 05:14:49] 2026-04-11 04:14:49,098 [wrapper] ==== pilot stdout END ====
[2026-04-11 05:14:49] 2026-04-11 04:14:49,100 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 05:14:49] 2026-04-11 04:14:49,102 [wrapper] pilotpid: 7957
[2026-04-11 05:14:49] 2026-04-11 04:14:49,104 [wrapper] Pilot exit status: 0
[2026-04-11 05:14:49] 2026-04-11 04:14:49,123 [wrapper] pandaids: 7085604027
[2026-04-11 05:14:49] 2026-04-11 04:14:49,138 [wrapper] cleanup supervisor_pilot   17403 7958
[2026-04-11 05:14:49] 2026-04-11 04:14:49,140 [wrapper] Test setup, not cleaning
[2026-04-11 05:14:49] 2026-04-11 04:14:49,142 [wrapper] apfmon messages muted
[2026-04-11 05:14:49] 2026-04-11 04:14:49,144 [wrapper] ==== wrapper stdout END ====
[2026-04-11 05:14:49] 2026-04-11 04:14:49,147 [wrapper] ==== wrapper stderr END ====
[2026-04-11 05:14:49]  *** Error codes and diagnostics ***
[2026-04-11 05:14:49]     "exeErrorCode": 0,
[2026-04-11 05:14:49]     "pilotErrorCode": 0,
[2026-04-11 05:14:49]  *** Listing of results directory ***
[2026-04-11 05:14:49] total 411048
[2026-04-11 05:14:49] -rw-r--r-- 1 m m    644190 Apr 11 00:45 pilot3.tar.gz
[2026-04-11 05:14:49] -rwx------ 1 m m     36322 Apr 11 00:48 runpilot2-wrapper.sh
[2026-04-11 05:14:49] -rw-r--r-- 1 m m      5094 Apr 11 00:52 queuedata.json
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m       100 Apr 11 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 05:14:49] -rwxr-xr-x 1 m m      7986 Apr 11 02:10 run_atlas
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m       105 Apr 11 02:10 job.xml
[2026-04-11 05:14:49] -rw-r--r-- 2 m m     15665 Apr 11 02:10 start_atlas.sh
[2026-04-11 05:14:49] drwxrwx--x 2 m m      4096 Apr 11 02:10 shared
[2026-04-11 05:14:49] -rw-r--r-- 2 m m    656935 Apr 11 02:10 input.tar.gz
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m      5872 Apr 11 02:10 init_data.xml
[2026-04-11 05:14:49] -rw-r--r-- 2 m m 223098276 Apr 11 02:10 EVNT.49263198._000918.pool.root.1
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m         0 Apr 11 02:10 boinc_lockfile
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m      2575 Apr 11 02:10 pandaJob.out
[2026-04-11 05:14:49] -rw------- 1 m m    997860 Apr 11 02:12 agis_schedconf.cvmfs.json
[2026-04-11 05:14:49] -rw------- 1 m m       416 Apr 11 02:13 workernode_map.json
[2026-04-11 05:14:49] drwx------ 5 m m      4096 Apr 11 02:13 pilot3
[2026-04-11 05:14:49] -rw------- 1 m m 191129894 Apr 11 05:13 HITS.49263200._040353.pool.root.1
[2026-04-11 05:14:49] -rw------- 1 m m        95 Apr 11 05:13 pilot_heartbeat.json
[2026-04-11 05:14:49] -rw------- 1 m m      1011 Apr 11 05:14 memory_monitor_summary.json
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m       488 Apr 11 05:14 boinc_task_state.xml
[2026-04-11 05:14:49] -rw------- 1 m m   1511579 Apr 11 05:14 agis_ddmendpoints.agis.ALL.json
[2026-04-11 05:14:49] -rw------- 1 m m    313812 Apr 11 05:14 log.49263200._040353.job.log.tgz.1
[2026-04-11 05:14:49] -rw------- 1 m m      6321 Apr 11 05:14 heartbeat_new.json
[2026-04-11 05:14:49] -rw------- 1 m m      6212 Apr 11 05:14 heartbeat.json
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m      8192 Apr 11 05:14 boinc_mmap_file
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m        28 Apr 11 05:14 wrapper_checkpoint.txt
[2026-04-11 05:14:49] -rw------- 1 m m      4547 Apr 11 05:14 pilotlog.txt
[2026-04-11 05:14:49] -rw------- 1 m m    998028 Apr 11 05:14 log.49263200._040353.job.log.1
[2026-04-11 05:14:49] -rw------- 1 m m       357 Apr 11 05:14 output.list
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m       410 Apr 11 05:14 runtime_log
[2026-04-11 05:14:49] -rw------- 1 m m   1331200 Apr 11 05:14 result.tar.gz
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m      8351 Apr 11 05:14 runtime_log.err
[2026-04-11 05:14:49] -rw------- 1 m m       641 Apr 11 05:14 8c59b09bef8e.diag
[2026-04-11 05:14:49] -rw-rw-r-- 1 m m     20845 Apr 11 05:14 stderr.txt
[2026-04-11 05:14:49] HITS file was successfully produced:
[2026-04-11 05:14:49] -rw------- 1 m m 191129894 Apr 11 05:13 shared/HITS.pool.root.1
[2026-04-11 05:14:49]  *** Contents of shared directory: ***
[2026-04-11 05:14:49] total 406492
[2026-04-11 05:14:49] -rw-r--r-- 2 m m     15665 Apr 11 02:10 start_atlas.sh
[2026-04-11 05:14:49] -rw-r--r-- 2 m m    656935 Apr 11 02:10 input.tar.gz
[2026-04-11 05:14:49] -rw-r--r-- 2 m m 223098276 Apr 11 02:10 ATLAS.root_0
[2026-04-11 05:14:49] -rw------- 1 m m 191129894 Apr 11 05:13 HITS.pool.root.1
[2026-04-11 05:14:49] -rw------- 1 m m   1331200 Apr 11 05:14 result.tar.gz
05:14:50 (3650): run_atlas exited; CPU time 41575.825590
05:14:50 (3650): called boinc_finish(0)

</stderr_txt>
]]>

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