Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:33 (3939): wrapper (7.7.26015): starting
11:52:33 (3939): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 11:52:33] Arguments: --nthreads 8
[2026-04-11 11:52:33] Threads: 8
[2026-04-11 11:52:33] Checking for CVMFS
[2026-04-11 11:52:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 11:52:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 11:52:37] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 11:52:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 11:52:39] 2.11.2.0 27056 14176 101956 158339 3 54 20173587 25165825 188 130560 0 3639853 99.520 4150422 7184 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-11 11:52:39] CVMFS is ok
[2026-04-11 11:52:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 11:52:39] Checking for apptainer binary...
[2026-04-11 11:52:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 11:52:39] Running /usr/bin/apptainer --version
[2026-04-11 11:52:39] apptainer version 1.3.2-1.el7
[2026-04-11 11:52:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 11:52:45] cg-vwn402.simple-grid.lan
[2026-04-11 11:52:45] apptainer works
[2026-04-11 11:52:45] Set ATHENA_PROC_NUMBER=8
[2026-04-11 11:52:45] Set ATHENA_CORE_NUMBER=8
[2026-04-11 11:52:45] Starting ATLAS job with PandaID=7085603995
[2026-04-11 11:52:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 15:57:51]  *** The last 200 lines of the pilot log: ***
[2026-04-11 15:57:51] 2026-04-11 13:56:43,631 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,632 | INFO     | log transfer has been attempted: DONE
[2026-04-11 15:57:51] 2026-04-11 13:56:43,632 | INFO     | job 7085603995 has finished - writing final server update
[2026-04-11 15:57:51] 2026-04-11 13:56:43,632 | INFO     | total number of processed events: 400 (read)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,634 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7085603995/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,635 | INFO     | extracted standard info from prmon json
[2026-04-11 15:57:51] 2026-04-11 13:56:43,635 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 15:57:51] 2026-04-11 13:56:43,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 15:57:51] 2026-04-11 13:56:43,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 15:57:51] 2026-04-11 13:56:43,641 | INFO     | fitting pss+swap vs Time
[2026-04-11 15:57:51] 2026-04-11 13:56:43,641 | INFO     | sum of square deviations: 3675146117.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,643 | INFO     | sum of deviations: 132412311735.00005
[2026-04-11 15:57:51] 2026-04-11 13:56:43,643 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,643 | INFO     | mean y: 2402229.543859649
[2026-04-11 15:57:51] 2026-04-11 13:56:43,644 | INFO     | intersect: 2402229.543859649
[2026-04-11 15:57:51] 2026-04-11 13:56:43,644 | INFO     | chi2: 9.134904594373442
[2026-04-11 15:57:51] 2026-04-11 13:56:43,645 | INFO     | sum of square deviations: 3438620752.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,647 | INFO     | sum of deviations: 144183597269.0001
[2026-04-11 15:57:51] 2026-04-11 13:56:43,647 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,647 | INFO     | mean y: 2409647.4798206277
[2026-04-11 15:57:51] 2026-04-11 13:56:43,647 | INFO     | intersect: 2409647.4798206277
[2026-04-11 15:57:51] 2026-04-11 13:56:43,648 | INFO     | chi2: 8.442696866842535
[2026-04-11 15:57:51] 2026-04-11 13:56:43,648 | INFO     | current chi2=8.442696866842535 (change=7.577613103450092 %)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,648 | INFO     | right removable region: 222
[2026-04-11 15:57:51] 2026-04-11 13:56:43,648 | INFO     | sum of square deviations: 3438620752.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,650 | INFO     | sum of deviations: 52471244312.99999
[2026-04-11 15:57:51] 2026-04-11 13:56:43,651 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,651 | INFO     | mean y: 2453747.64573991
[2026-04-11 15:57:51] 2026-04-11 13:56:43,651 | INFO     | intersect: 2453747.64573991
[2026-04-11 15:57:51] 2026-04-11 13:56:43,651 | INFO     | chi2: 3.837645562402534
[2026-04-11 15:57:51] 2026-04-11 13:56:43,652 | INFO     | current chi2=3.837645562402534 (change=57.989210256598675 %)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,652 | INFO     | sum of square deviations: 3212467674.5
[2026-04-11 15:57:51] 2026-04-11 13:56:43,654 | INFO     | sum of deviations: -8279793154.000003
[2026-04-11 15:57:51] 2026-04-11 13:56:43,654 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,654 | INFO     | mean y: 2494659.7247706424
[2026-04-11 15:57:51] 2026-04-11 13:56:43,654 | INFO     | intersect: 2494659.7247706424
[2026-04-11 15:57:51] 2026-04-11 13:56:43,655 | INFO     | chi2: 1.0280115762974416
[2026-04-11 15:57:51] 2026-04-11 13:56:43,655 | INFO     | current chi2=1.0280115762974416 (change=73.21244081608565 %)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,655 | INFO     | sum of square deviations: 2996454322.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,657 | INFO     | sum of deviations: -23742342713.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,657 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,658 | INFO     | mean y: 2505543.384976526
[2026-04-11 15:57:51] 2026-04-11 13:56:43,658 | INFO     | intersect: 2505543.384976526
[2026-04-11 15:57:51] 2026-04-11 13:56:43,658 | INFO     | chi2: 0.8248202343363324
[2026-04-11 15:57:51] 2026-04-11 13:56:43,658 | INFO     | current chi2=0.8248202343363324 (change=19.765472164519515 %)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,658 | INFO     | left removable region: 15
[2026-04-11 15:57:51] 2026-04-11 13:56:43,659 | INFO     | sum of square deviations: 2750295288.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,661 | INFO     | sum of deviations: -9316218412.000002
[2026-04-11 15:57:51] 2026-04-11 13:56:43,661 | INFO     | mean x (centered): 0.0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,661 | INFO     | mean y: 2516022.222222222
[2026-04-11 15:57:51] 2026-04-11 13:56:43,661 | INFO     | intersect: 2516022.222222222
[2026-04-11 15:57:51] 2026-04-11 13:56:43,661 | INFO     | chi2: 0.034690841095374125
[2026-04-11 15:57:51] 2026-04-11 13:56:43,662 | INFO     | current memory leak: -3.39 B/s (using 207 data points, chi2=0.03)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,662 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,662 | INFO     | ..............................
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . Timing measurements:
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . get job = 0 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . initial setup = 122 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . payload setup = 232 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . stage-in = 0 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . payload execution = 13987 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . stage-out = 5 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | . log creation = 1 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,663 | INFO     | ..............................
[2026-04-11 15:57:51] 2026-04-11 13:56:43,876 | INFO     | 
[2026-04-11 15:57:51] 2026-04-11 13:56:43,876 | INFO     | job summary report
[2026-04-11 15:57:51] 2026-04-11 13:56:43,876 | INFO     | --------------------------------------------------
[2026-04-11 15:57:51] 2026-04-11 13:56:43,876 | INFO     | PanDA job id: 7085603995
[2026-04-11 15:57:51] 2026-04-11 13:56:43,876 | INFO     | task id: 49263200
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | errors: (none)
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | pilot state: finished 
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | transexitcode: 0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | exeerrorcode: 0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | exeerrordiag: 
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | exitcode: 0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | exitmsg: OK
[2026-04-11 15:57:51] 2026-04-11 13:56:43,877 | INFO     | cpuconsumptiontime: 57839 s
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | nevents: 400
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | neventsw: 0
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | pid: 12371
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | pgrp: 12371
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | corecount: 8
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | event service: False
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | sizes: {0: 2279010, 1: 2279695, 2: 2281524, 13: 2281524, 14224: 2312008, 14230: 2321006, 14232: 2321190, 14235: 2321384}
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | --------------------------------------------------
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | 
[2026-04-11 15:57:51] 2026-04-11 13:56:43,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-11 15:57:51] 2026-04-11 13:56:44,478 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,481 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 15:57:51] 2026-04-11 13:56:44,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,481 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 15:57:51] 2026-04-11 13:56:44,481 | INFO     | job 7085603995 has completed (purged errors)
[2026-04-11 15:57:51] 2026-04-11 13:56:44,481 | INFO     | overall cleanup function is called
[2026-04-11 15:57:51] 2026-04-11 13:56:45,490 | INFO     | --- collectZombieJob: --- 10, [12371]
[2026-04-11 15:57:51] 2026-04-11 13:56:45,490 | INFO     | zombie collector waiting for pid 12371
[2026-04-11 15:57:51] 2026-04-11 13:56:45,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 15:57:51] 2026-04-11 13:56:45,490 | INFO     | collected zombie processes
[2026-04-11 15:57:51] 2026-04-11 13:56:45,490 | INFO     | will attempt to kill all subprocesses of pid=12371
[2026-04-11 15:57:51] 2026-04-11 13:56:45,568 | INFO     | process IDs to be killed: [12371] (in reverse order)
[2026-04-11 15:57:51] 2026-04-11 13:56:46,422 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 15:57:51] 2026-04-11 13:56:46,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 15:57:51] 2026-04-11 13:56:46,424 | INFO     | did not find any defunct processes belonging to 12371
[2026-04-11 15:57:51] 2026-04-11 13:56:46,426 | INFO     | did not find any defunct processes belonging to 12371
[2026-04-11 15:57:51] 2026-04-11 13:56:46,426 | INFO     | Ready for new job
[2026-04-11 15:57:51] 2026-04-11 13:56:46,428 | INFO     | **************************************
[2026-04-11 15:57:51] 2026-04-11 13:56:46,428 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 15:57:51] 2026-04-11 13:56:46,428 | INFO     | **************************************
[2026-04-11 15:57:51] 2026-04-11 13:56:46,428 | INFO     | 
[2026-04-11 15:57:51] 2026-04-11 13:56:46,429 | INFO     | pilot is running in a VM
[2026-04-11 15:57:51] 2026-04-11 13:56:46,429 | INFO     | architecture information:
[2026-04-11 15:57:51] 2026-04-11 13:56:46,436 | INFO     | executing command: cat /etc/os-release
[2026-04-11 15:57:51] 2026-04-11 13:56:46,705 | INFO     | cat /etc/os-release:
[2026-04-11 15:57:51] NAME="CentOS Linux"
[2026-04-11 15:57:51] VERSION="7 (Core)"
[2026-04-11 15:57:51] ID="centos"
[2026-04-11 15:57:51] ID_LIKE="rhel fedora"
[2026-04-11 15:57:51] VERSION_ID="7"
[2026-04-11 15:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 15:57:51] ANSI_COLOR="0;31"
[2026-04-11 15:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 15:57:51] HOME_URL="https://www.centos.org/"
[2026-04-11 15:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 15:57:51] 
[2026-04-11 15:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 15:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 15:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 15:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 15:57:51] 
[2026-04-11 15:57:51] 2026-04-11 13:56:46,706 | INFO     | **************************************
[2026-04-11 15:57:51] 2026-04-11 13:56:47,209 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-11 15:57:51] 2026-04-11 13:56:47,472 | INFO     | sufficient remaining disk space (497272487936 B)
[2026-04-11 15:57:51] 2026-04-11 13:56:47,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 15:57:51] 2026-04-11 13:56:47,473 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 15:57:51] 2026-04-11 13:56:47,473 | INFO     | update_server=False
[2026-04-11 15:57:51] 2026-04-11 13:56:47,473 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 15:57:51] 2026-04-11 13:56:47,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 15:57:51] 2026-04-11 13:56:47,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 15:57:51] 2026-04-11 13:56:47,682 | INFO     | all job control threads have been joined
[2026-04-11 15:57:51] 2026-04-11 13:56:47,740 | INFO     | all payload control threads have been joined
[2026-04-11 15:57:51] 2026-04-11 13:56:48,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 15:57:51] 2026-04-11 13:56:48,198 | INFO     | aborting loop
[2026-04-11 15:57:51] 2026-04-11 13:56:48,267 | INFO     | all data control threads have been joined
[2026-04-11 15:57:51] 2026-04-11 13:56:48,479 | INFO     | [job] retrieve thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:48,584 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:48,636 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:48,688 | INFO     | [job] control thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:48,746 | INFO     | [payload] control thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:48,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 15:57:51] 2026-04-11 13:56:48,820 | INFO     | [payload] failed_post thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,204 | INFO     | [job] job monitor thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,273 | INFO     | [data] control thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,350 | INFO     | [job] validate thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,423 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,484 | INFO     | [data] copytool_out thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,765 | INFO     | [payload] validate_post thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,814 | INFO     | [job] queue monitor thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,923 | INFO     | [data] copytool_in thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:49,958 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:56:51,483 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 15:57:51] 2026-04-11 13:57:14,965 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-04-11 15:57:51] 2026-04-11 13:57:17,589 | INFO     | PID=7919 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-11 15:57:51] 2026-04-11 13:57:17,590 | INFO     | .. there are 2 such processes running
[2026-04-11 15:57:51] 2026-04-11 13:57:17,591 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 15:57:51] 2026-04-11 13:57:17,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 15:57:51] 2026-04-11 13:57:17,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 15:57:51] 2026-04-11 13:57:39,983 | INFO     | [monitor] cgroup control has ended
[2026-04-11 15:57:51] 2026-04-11 13:57:40,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183608510272)>', '<ExcThread(monitor, started 140182850344704)>']
[2026-04-11 15:57:51] 2026-04-11 13:57:40,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 15:57:51] 2026-04-11 13:57:40,729 | INFO     | [monitor] control thread has ended
[2026-04-11 15:57:51] 2026-04-11 13:57:45,397 | INFO     | all workflow threads have been joined
[2026-04-11 15:57:51] 2026-04-11 13:57:45,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 15:57:51] 2026-04-11 13:57:45,398 | INFO     | traces error code: 0
[2026-04-11 15:57:51] 2026-04-11 13:57:45,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 15:57:51] 2026-04-11 13:57:45,839 [wrapper] ==== pilot stdout END ====
[2026-04-11 15:57:51] 2026-04-11 13:57:45,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 15:57:51] 2026-04-11 13:57:45,974 [wrapper] pilotpid: 7919
[2026-04-11 15:57:51] 2026-04-11 13:57:46,075 [wrapper] Pilot exit status: 0
[2026-04-11 15:57:51] 2026-04-11 13:57:46,607 [wrapper] pandaids: 7085603995
[2026-04-11 15:57:51] 2026-04-11 13:57:47,585 [wrapper] cleanup supervisor_pilot 29769 7920
[2026-04-11 15:57:51] 2026-04-11 13:57:47,712 [wrapper] Test setup, not cleaning
[2026-04-11 15:57:51] 2026-04-11 13:57:47,774 [wrapper] apfmon messages muted
[2026-04-11 15:57:51] 2026-04-11 13:57:47,885 [wrapper] ==== wrapper stdout END ====
[2026-04-11 15:57:51] 2026-04-11 13:57:47,997 [wrapper] ==== wrapper stderr END ====
[2026-04-11 15:57:51]  *** Error codes and diagnostics ***
[2026-04-11 15:57:51]     "exeErrorCode": 0,
[2026-04-11 15:57:51]     "pilotErrorCode": 0,
[2026-04-11 15:57:51]  *** Listing of results directory ***
[2026-04-11 15:57:51] total 413156
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc    644190 Apr 11 01:45 pilot3.tar.gz
[2026-04-11 15:57:51] -rwx------. 1 boinc boinc     36322 Apr 11 01:48 runpilot2-wrapper.sh
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc      5094 Apr 11 01:52 queuedata.json
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc       100 Apr 11 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 15:57:51] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 11:52 run_atlas
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc       105 Apr 11 11:52 job.xml
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc 220269269 Apr 11 11:52 EVNT.49263198._000917.pool.root.1
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc    656933 Apr 11 11:52 input.tar.gz
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc      6305 Apr 11 11:52 init_data.xml
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc     15665 Apr 11 11:52 start_atlas.sh
[2026-04-11 15:57:51] drwxrwx--x. 2 boinc boinc        68 Apr 11 11:52 shared
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc         0 Apr 11 11:52 boinc_lockfile
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc      2575 Apr 11 11:52 pandaJob.out
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc       415 Apr 11 11:59 workernode_map.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc    997836 Apr 11 11:59 agis_schedconf.cvmfs.json
[2026-04-11 15:57:51] drwx------. 5 boinc boinc      4096 Apr 11 11:59 pilot3
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc 195332369 Apr 11 15:55 HITS.49263200._040321.pool.root.1
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc       488 Apr 11 15:55 boinc_task_state.xml
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc      1019 Apr 11 15:56 memory_monitor_summary.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc   1511579 Apr 11 15:56 agis_ddmendpoints.agis.ALL.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc    396467 Apr 11 15:56 log.49263200._040321.job.log.tgz.1
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc      6348 Apr 11 15:56 heartbeat_new.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc      6239 Apr 11 15:56 heartbeat.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc        95 Apr 11 15:57 pilot_heartbeat.json
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc      4878 Apr 11 15:57 pilotlog.txt
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc      8192 Apr 11 15:57 boinc_mmap_file
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc        28 Apr 11 15:57 wrapper_checkpoint.txt
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc   1318592 Apr 11 15:57 log.49263200._040321.job.log.1
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc       357 Apr 11 15:57 output.list
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc       410 Apr 11 15:57 runtime_log
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc   1730560 Apr 11 15:57 result.tar.gz
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc      8438 Apr 11 15:57 runtime_log.err
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc       656 Apr 11 15:57 8c5996f81e25.diag
[2026-04-11 15:57:51] -rw-r--r--. 1 boinc boinc     20631 Apr 11 15:57 stderr.txt
[2026-04-11 15:57:51] HITS file was successfully produced:
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc 195332369 Apr 11 15:55 shared/HITS.pool.root.1
[2026-04-11 15:57:51]  *** Contents of shared directory: ***
[2026-04-11 15:57:51] total 408216
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc 220269269 Apr 11 11:52 ATLAS.root_0
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc    656933 Apr 11 11:52 input.tar.gz
[2026-04-11 15:57:51] -rw-r--r--. 2 boinc boinc     15665 Apr 11 11:52 start_atlas.sh
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc 195332369 Apr 11 15:55 HITS.pool.root.1
[2026-04-11 15:57:51] -rw-------. 1 boinc boinc   1730560 Apr 11 15:57 result.tar.gz
15:57:52 (3939): run_atlas exited; CPU time 57984.573983
15:57:52 (3939): called boinc_finish(0)

</stderr_txt>
]]>

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