Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:09:40 (4321): wrapper (7.7.26015): starting
03:09:40 (4321): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 03:09:40] Arguments: --nthreads 4
[2026-04-11 03:09:40] Threads: 4
[2026-04-11 03:09:40] Checking for CVMFS
[2026-04-11 03:09:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 03:09:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 03:09:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 03:09:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 03:09:59] 2.12.7.0 4544 0 25268 158327 3 1 4181568 4194305 0 130560 0 0 0.000 1337 2063 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-11 03:09:59] CVMFS is ok
[2026-04-11 03:09:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 03:09:59] Checking for apptainer binary...
[2026-04-11 03:09:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 03:09:59] Running /usr/bin/apptainer --version
[2026-04-11 03:09:59] apptainer version 1.0.3
[2026-04-11 03:09:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 03:10:00] TeeC06
[2026-04-11 03:10:00] apptainer works
[2026-04-11 03:10:00] Set ATHENA_PROC_NUMBER=4
[2026-04-11 03:10:00] Set ATHENA_CORE_NUMBER=4
[2026-04-11 03:10:00] Starting ATLAS job with PandaID=7085603895
[2026-04-11 03:10:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 05:58:17]  *** The last 200 lines of the pilot log: ***
[2026-04-11 05:58:17] 2026-04-11 04:57:35,867 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7085603895/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 05:58:17] 2026-04-11 04:57:35,912 | INFO     | number of running child processes to parent process 13040: 1
[2026-04-11 05:58:17] 2026-04-11 04:57:35,912 | INFO     | maximum number of monitored processes: 6
[2026-04-11 05:58:17] 2026-04-11 04:57:37,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 05:58:17] 2026-04-11 04:57:37,820 | INFO     | job 7085603895 has state=finished
[2026-04-11 05:58:17] 2026-04-11 04:57:37,821 | INFO     | preparing for final server update for job 7085603895 in state='finished'
[2026-04-11 05:58:17] 2026-04-11 04:57:37,821 | INFO     | reading metadata from: /home/m/BOINC/slots/1/PanDA_Pilot-7085603895/jobReport.json
[2026-04-11 05:58:17] 2026-04-11 04:57:37,822 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/1/workernode_map.json
[2026-04-11 05:58:17] 2026-04-11 04:57:37,822 | INFO     | this job has now completed (state=finished)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,822 | INFO     | log transfer has been attempted: DONE
[2026-04-11 05:58:17] 2026-04-11 04:57:37,822 | INFO     | job 7085603895 has finished - writing final server update
[2026-04-11 05:58:17] 2026-04-11 04:57:37,823 | INFO     | total number of processed events: 400 (read)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,840 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7085603895/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,841 | INFO     | extracted standard info from prmon json
[2026-04-11 05:58:17] 2026-04-11 04:57:37,841 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 05:58:17] 2026-04-11 04:57:37,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 05:58:17] 2026-04-11 04:57:37,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 05:58:17] 2026-04-11 04:57:37,843 | INFO     | fitting pss+swap vs Time
[2026-04-11 05:58:17] 2026-04-11 04:57:37,843 | INFO     | sum of square deviations: 1367709365.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,843 | INFO     | sum of deviations: -3756771589.4999857
[2026-04-11 05:58:17] 2026-04-11 04:57:37,844 | INFO     | mean x (centered): 0.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,844 | INFO     | mean y: 2389248.6524390243
[2026-04-11 05:58:17] 2026-04-11 04:57:37,844 | INFO     | intersect: 2389248.6524390243
[2026-04-11 05:58:17] 2026-04-11 04:57:37,844 | INFO     | chi2: 1.368673279151666
[2026-04-11 05:58:17] 2026-04-11 04:57:37,844 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | sum of deviations: -3433557874.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | mean x (centered): 0.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | mean y: 2389657.603773585
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | intersect: 2389657.603773585
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | chi2: 1.3686010172365648
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | current chi2=1.3686010172365648 (change=0.005279705259243787 %)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | right removable region: 158
[2026-04-11 05:58:17] 2026-04-11 04:57:37,845 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | sum of deviations: -23517159810.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | mean x (centered): 0.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | mean y: 2413660.4150943398
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | intersect: 2413660.4150943398
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | chi2: 0.048234557733296934
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | current chi2=0.048234557733296934 (change=96.47581651019053 %)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,846 | INFO     | sum of square deviations: 1132458442.5
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | sum of deviations: -22462930695.499996
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | mean x (centered): 0.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | mean y: 2412242.525974026
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | intersect: 2412242.525974026
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | chi2: 0.04628688712152929
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | current chi2=0.04628688712152929 (change=4.037915352177346 %)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | left removable region: 10
[2026-04-11 05:58:17] 2026-04-11 04:57:37,847 | INFO     | sum of square deviations: 1005179777.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | sum of deviations: -21389829248.500004
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | mean x (centered): 0.0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | mean y: 2413792.060810811
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | intersect: 2413792.060810811
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | chi2: 0.042929722641956984
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | current memory leak: -21.28 B/s (using 148 data points, chi2=0.04)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | could have reported an average CPU frequency of 3199 MHz (9 samples)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | ..............................
[2026-04-11 05:58:17] 2026-04-11 04:57:37,848 | INFO     | . Timing measurements:
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . get job = 0 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . initial setup = 25 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . payload setup = 8 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . stage-in = 0 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . payload execution = 9975 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . stage-out = 0 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | . log creation = 0 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,849 | INFO     | ..............................
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | 
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | job summary report
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | --------------------------------------------------
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | PanDA job id: 7085603895
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | task id: 49263200
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | errors: (none)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | pilot state: finished 
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | transexitcode: 0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | exeerrorcode: 0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | exeerrordiag: 
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | exitcode: 0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | exitmsg: OK
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | cpuconsumptiontime: 38598 s
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | nevents: 400
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | neventsw: 0
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | pid: 13040
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | pgrp: 13040
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | corecount: 4
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | event service: False
[2026-04-11 05:58:17] 2026-04-11 04:57:37,890 | INFO     | sizes: {0: 2279893, 1: 2281495, 11: 2281495, 9987: 2310056, 9988: 2319052, 9991: 2319494}
[2026-04-11 05:58:17] 2026-04-11 04:57:37,891 | INFO     | --------------------------------------------------
[2026-04-11 05:58:17] 2026-04-11 04:57:37,891 | INFO     | 
[2026-04-11 05:58:17] 2026-04-11 04:57:37,891 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | job 7085603895 has completed (purged errors)
[2026-04-11 05:58:17] 2026-04-11 04:57:37,901 | INFO     | overall cleanup function is called
[2026-04-11 05:58:17] 2026-04-11 04:57:38,908 | INFO     | --- collectZombieJob: --- 10, [13040]
[2026-04-11 05:58:17] 2026-04-11 04:57:38,908 | INFO     | zombie collector waiting for pid 13040
[2026-04-11 05:58:17] 2026-04-11 04:57:38,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 05:58:17] 2026-04-11 04:57:38,909 | INFO     | collected zombie processes
[2026-04-11 05:58:17] 2026-04-11 04:57:38,909 | INFO     | will attempt to kill all subprocesses of pid=13040
[2026-04-11 05:58:17] 2026-04-11 04:57:38,965 | INFO     | process IDs to be killed: [13040] (in reverse order)
[2026-04-11 05:58:17] 2026-04-11 04:57:38,991 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 05:58:17] 2026-04-11 04:57:38,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 05:58:17] 2026-04-11 04:57:38,992 | INFO     | did not find any defunct processes belonging to 13040
[2026-04-11 05:58:17] 2026-04-11 04:57:38,994 | INFO     | did not find any defunct processes belonging to 13040
[2026-04-11 05:58:17] 2026-04-11 04:57:38,994 | INFO     | Ready for new job
[2026-04-11 05:58:17] 2026-04-11 04:57:38,995 | INFO     | **************************************
[2026-04-11 05:58:17] 2026-04-11 04:57:38,995 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 05:58:17] 2026-04-11 04:57:38,995 | INFO     | **************************************
[2026-04-11 05:58:17] 2026-04-11 04:57:38,995 | INFO     | 
[2026-04-11 05:58:17] 2026-04-11 04:57:39,012 | INFO     | architecture information:
[2026-04-11 05:58:17] 2026-04-11 04:57:39,012 | INFO     | executing command: cat /etc/os-release
[2026-04-11 05:58:17] 2026-04-11 04:57:39,019 | INFO     | cat /etc/os-release:
[2026-04-11 05:58:17] NAME="CentOS Linux"
[2026-04-11 05:58:17] VERSION="7 (Core)"
[2026-04-11 05:58:17] ID="centos"
[2026-04-11 05:58:17] ID_LIKE="rhel fedora"
[2026-04-11 05:58:17] VERSION_ID="7"
[2026-04-11 05:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 05:58:17] ANSI_COLOR="0;31"
[2026-04-11 05:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 05:58:17] HOME_URL="https://www.centos.org/"
[2026-04-11 05:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 05:58:17] 
[2026-04-11 05:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 05:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 05:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 05:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 05:58:17] 
[2026-04-11 05:58:17] 2026-04-11 04:57:39,020 | INFO     | **************************************
[2026-04-11 05:58:17] 2026-04-11 04:57:39,523 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-04-11 05:58:17] 2026-04-11 04:57:39,534 | INFO     | sufficient remaining disk space (432089858048 B)
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | INFO     | update_server=False
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 05:58:17] 2026-04-11 04:57:39,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 05:58:17] 2026-04-11 04:57:39,536 | INFO     | aborting loop
[2026-04-11 05:58:17] 2026-04-11 04:57:39,785 | INFO     | all data control threads have been joined
[2026-04-11 05:58:17] 2026-04-11 04:57:40,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 05:58:17] 2026-04-11 04:57:40,464 | INFO     | all payload control threads have been joined
[2026-04-11 05:58:17] 2026-04-11 04:57:40,539 | INFO     | [job] job monitor thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:40,540 | INFO     | [job] queue monitor thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:40,541 | INFO     | [job] retrieve thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:40,583 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:40,791 | INFO     | [data] control thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:40,939 | INFO     | all job control threads have been joined
[2026-04-11 05:58:17] 2026-04-11 04:57:41,222 | INFO     | [payload] failed_post thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,470 | INFO     | [payload] control thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,480 | INFO     | [job] validate thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,545 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,610 | INFO     | [payload] validate_post thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,754 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,900 | INFO     | [data] copytool_in thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:41,945 | INFO     | [job] control thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:42,153 | INFO     | [data] copytool_out thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:43,543 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:57:49,832 | INFO     | job.realtimelogging is not enabled
[2026-04-11 05:58:17] 2026-04-11 04:57:50,839 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 05:58:17] 2026-04-11 04:58:10,111 | INFO     | PID=8660 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-11 05:58:17] 2026-04-11 04:58:10,111 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 05:58:17] 2026-04-11 04:58:10,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 05:58:17] 2026-04-11 04:58:10,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 05:58:17] 2026-04-11 04:58:11,976 | INFO     | [monitor] cgroup control has ended
[2026-04-11 05:58:17] 2026-04-11 04:58:12,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733650286400)>', '<ExcThread(monitor, started 139733028022016)>']
[2026-04-11 05:58:17] 2026-04-11 04:58:13,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 05:58:17] 2026-04-11 04:58:13,128 | INFO     | [monitor] control thread has ended
[2026-04-11 05:58:17] 2026-04-11 04:58:17,197 | INFO     | all workflow threads have been joined
[2026-04-11 05:58:17] 2026-04-11 04:58:17,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 05:58:17] 2026-04-11 04:58:17,198 | INFO     | traces error code: 0
[2026-04-11 05:58:17] 2026-04-11 04:58:17,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 05:58:17] 2026-04-11 04:58:17,290 [wrapper] ==== pilot stdout END ====
[2026-04-11 05:58:17] 2026-04-11 04:58:17,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 05:58:17] 2026-04-11 04:58:17,294 [wrapper] pilotpid: 8660
[2026-04-11 05:58:17] 2026-04-11 04:58:17,296 [wrapper] Pilot exit status: 0
[2026-04-11 05:58:17] 2026-04-11 04:58:17,320 [wrapper] pandaids: 7085603895
[2026-04-11 05:58:17] 2026-04-11 04:58:17,335 [wrapper] cleanup supervisor_pilot   18104 8661
[2026-04-11 05:58:17] 2026-04-11 04:58:17,337 [wrapper] Test setup, not cleaning
[2026-04-11 05:58:17] 2026-04-11 04:58:17,339 [wrapper] apfmon messages muted
[2026-04-11 05:58:17] 2026-04-11 04:58:17,341 [wrapper] ==== wrapper stdout END ====
[2026-04-11 05:58:17] 2026-04-11 04:58:17,343 [wrapper] ==== wrapper stderr END ====
[2026-04-11 05:58:17]  *** Error codes and diagnostics ***
[2026-04-11 05:58:17]     "exeErrorCode": 0,
[2026-04-11 05:58:17]     "pilotErrorCode": 0,
[2026-04-11 05:58:17]  *** Listing of results directory ***
[2026-04-11 05:58:17] total 415700
[2026-04-11 05:58:17] -rw-r--r-- 1 m m      5094 Apr 11 00:45 queuedata.json
[2026-04-11 05:58:17] -rw-r--r-- 1 m m    644190 Apr 11 00:45 pilot3.tar.gz
[2026-04-11 05:58:17] -rwx------ 1 m m     36322 Apr 11 00:46 runpilot2-wrapper.sh
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m       100 Apr 11 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 05:58:17] -rwxr-xr-x 1 m m      7986 Apr 11 03:09 run_atlas
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m       105 Apr 11 03:09 job.xml
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m      5874 Apr 11 03:09 init_data.xml
[2026-04-11 05:58:17] -rw-r--r-- 2 m m 224647297 Apr 11 03:09 EVNT.49263198._000913.pool.root.1
[2026-04-11 05:58:17] -rw-r--r-- 2 m m     15665 Apr 11 03:09 start_atlas.sh
[2026-04-11 05:58:17] drwxrwx--x 2 m m      4096 Apr 11 03:09 shared
[2026-04-11 05:58:17] -rw-r--r-- 2 m m    656929 Apr 11 03:09 input.tar.gz
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m         0 Apr 11 03:09 boinc_lockfile
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m      2575 Apr 11 03:10 pandaJob.out
[2026-04-11 05:58:17] -rw------- 1 m m    997860 Apr 11 03:10 agis_schedconf.cvmfs.json
[2026-04-11 05:58:17] -rw------- 1 m m   1511579 Apr 11 03:10 agis_ddmendpoints.agis.ALL.json
[2026-04-11 05:58:17] -rw------- 1 m m       415 Apr 11 03:10 workernode_map.json
[2026-04-11 05:58:17] drwx------ 5 m m      4096 Apr 11 03:10 pilot3
[2026-04-11 05:58:17] -rw------- 1 m m 194525715 Apr 11 05:57 HITS.49263200._040221.pool.root.1
[2026-04-11 05:58:17] -rw------- 1 m m      1012 Apr 11 05:57 memory_monitor_summary.json
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m       488 Apr 11 05:57 boinc_task_state.xml
[2026-04-11 05:58:17] -rw------- 1 m m        95 Apr 11 05:57 pilot_heartbeat.json
[2026-04-11 05:58:17] -rw------- 1 m m    295865 Apr 11 05:57 log.49263200._040221.job.log.tgz.1
[2026-04-11 05:58:17] -rw------- 1 m m      6315 Apr 11 05:57 heartbeat_new.json
[2026-04-11 05:58:17] -rw------- 1 m m      6206 Apr 11 05:57 heartbeat.json
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m      8192 Apr 11 05:58 boinc_mmap_file
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m        28 Apr 11 05:58 wrapper_checkpoint.txt
[2026-04-11 05:58:17] -rw------- 1 m m      4812 Apr 11 05:58 pilotlog.txt
[2026-04-11 05:58:17] -rw------- 1 m m    924225 Apr 11 05:58 log.49263200._040221.job.log.1
[2026-04-11 05:58:17] -rw------- 1 m m       357 Apr 11 05:58 output.list
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m       410 Apr 11 05:58 runtime_log
[2026-04-11 05:58:17] -rw------- 1 m m   1239040 Apr 11 05:58 result.tar.gz
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m      8351 Apr 11 05:58 runtime_log.err
[2026-04-11 05:58:17] -rw------- 1 m m       639 Apr 11 05:58 8bc46735c0e5.diag
[2026-04-11 05:58:17] -rw-rw-r-- 1 m m     20840 Apr 11 05:58 stderr.txt
[2026-04-11 05:58:17] HITS file was successfully produced:
[2026-04-11 05:58:17] -rw------- 1 m m 194525715 Apr 11 05:57 shared/HITS.pool.root.1
[2026-04-11 05:58:17]  *** Contents of shared directory: ***
[2026-04-11 05:58:17] total 411232
[2026-04-11 05:58:17] -rw-r--r-- 2 m m 224647297 Apr 11 03:09 ATLAS.root_0
[2026-04-11 05:58:17] -rw-r--r-- 2 m m     15665 Apr 11 03:09 start_atlas.sh
[2026-04-11 05:58:17] -rw-r--r-- 2 m m    656929 Apr 11 03:09 input.tar.gz
[2026-04-11 05:58:17] -rw------- 1 m m 194525715 Apr 11 05:57 HITS.pool.root.1
[2026-04-11 05:58:17] -rw------- 1 m m   1239040 Apr 11 05:58 result.tar.gz
05:58:18 (4321): run_atlas exited; CPU time 38689.010960
05:58:18 (4321): called boinc_finish(0)

</stderr_txt>
]]>

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