Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:25:11 (17111): wrapper (7.7.26015): starting
08:25:11 (17111): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 08:25:11] Arguments: --nthreads 8
[2026-04-11 08:25:11] Threads: 8
[2026-04-11 08:25:11] Checking for CVMFS
[2026-04-11 08:25:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 08:25:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 08:25:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 08:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 08:25:19] 2.11.2.0 31759 13990 97388 158335 3 54 20193598 25165824 188 130560 0 4555762 99.720 3781394 12058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-11 08:25:19] CVMFS is ok
[2026-04-11 08:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 08:25:19] Checking for apptainer binary...
[2026-04-11 08:25:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 08:25:19] Running /usr/bin/apptainer --version
[2026-04-11 08:25:19] apptainer version 1.3.2-1.el7
[2026-04-11 08:25:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 08:25:36] cg-vwn496.simple-grid.lan
[2026-04-11 08:25:36] apptainer works
[2026-04-11 08:25:36] Set ATHENA_PROC_NUMBER=8
[2026-04-11 08:25:36] Set ATHENA_CORE_NUMBER=8
[2026-04-11 08:25:36] Starting ATLAS job with PandaID=7083313443
[2026-04-11 08:25:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 12:34:54]  *** The last 200 lines of the pilot log: ***
[2026-04-11 12:34:54] 2026-04-11 10:33:40,632 | INFO     | this job has now completed (state=finished)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,632 | INFO     | log transfer has been attempted: DONE
[2026-04-11 12:34:54] 2026-04-11 10:33:40,632 | INFO     | job 7083313443 has finished - writing final server update
[2026-04-11 12:34:54] 2026-04-11 10:33:40,632 | INFO     | total number of processed events: 400 (read)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,634 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7083313443/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,635 | INFO     | extracted standard info from prmon json
[2026-04-11 12:34:54] 2026-04-11 10:33:40,635 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 12:34:54] 2026-04-11 10:33:40,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 12:34:54] 2026-04-11 10:33:40,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 12:34:54] 2026-04-11 10:33:40,641 | INFO     | fitting pss+swap vs Time
[2026-04-11 12:34:54] 2026-04-11 10:33:40,641 | INFO     | sum of square deviations: 3871990738.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,643 | INFO     | sum of deviations: 89136808790.50005
[2026-04-11 12:34:54] 2026-04-11 10:33:40,644 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,644 | INFO     | mean y: 2431116.0387931033
[2026-04-11 12:34:54] 2026-04-11 10:33:40,644 | INFO     | intersect: 2431116.0387931033
[2026-04-11 12:34:54] 2026-04-11 10:33:40,644 | INFO     | chi2: 7.762739968849451
[2026-04-11 12:34:54] 2026-04-11 10:33:40,645 | INFO     | sum of square deviations: 3627000098.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,650 | INFO     | sum of deviations: 102226506875.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,650 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,650 | INFO     | mean y: 2439097.7268722467
[2026-04-11 12:34:54] 2026-04-11 10:33:40,650 | INFO     | intersect: 2439097.7268722467
[2026-04-11 12:34:54] 2026-04-11 10:33:40,651 | INFO     | chi2: 7.064247788114277
[2026-04-11 12:34:54] 2026-04-11 10:33:40,651 | INFO     | current chi2=7.064247788114277 (change=8.998010799512853 %)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,651 | INFO     | right removable region: 226
[2026-04-11 12:34:54] 2026-04-11 10:33:40,652 | INFO     | sum of square deviations: 3627000098.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,654 | INFO     | sum of deviations: 11017816828.000017
[2026-04-11 12:34:54] 2026-04-11 10:33:40,654 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,654 | INFO     | mean y: 2479702.5506607927
[2026-04-11 12:34:54] 2026-04-11 10:33:40,654 | INFO     | intersect: 2479702.5506607927
[2026-04-11 12:34:54] 2026-04-11 10:33:40,655 | INFO     | chi2: 3.04660202847061
[2026-04-11 12:34:54] 2026-04-11 10:33:40,655 | INFO     | current chi2=3.04660202847061 (change=60.75352207215361 %)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,655 | INFO     | sum of square deviations: 3392567795.5
[2026-04-11 12:34:54] 2026-04-11 10:33:40,657 | INFO     | sum of deviations: -39556715109.5
[2026-04-11 12:34:54] 2026-04-11 10:33:40,657 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,657 | INFO     | mean y: 2512475.527027027
[2026-04-11 12:34:54] 2026-04-11 10:33:40,658 | INFO     | intersect: 2512475.527027027
[2026-04-11 12:34:54] 2026-04-11 10:33:40,658 | INFO     | chi2: 0.9935667739891646
[2026-04-11 12:34:54] 2026-04-11 10:33:40,658 | INFO     | current chi2=0.9935667739891646 (change=67.38770719955393 %)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,659 | INFO     | sum of square deviations: 3168461268.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,660 | INFO     | sum of deviations: -44989123575.99999
[2026-04-11 12:34:54] 2026-04-11 10:33:40,661 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,661 | INFO     | mean y: 2516148.5161290322
[2026-04-11 12:34:54] 2026-04-11 10:33:40,661 | INFO     | intersect: 2516148.5161290322
[2026-04-11 12:34:54] 2026-04-11 10:33:40,661 | INFO     | chi2: 0.9461267718413036
[2026-04-11 12:34:54] 2026-04-11 10:33:40,665 | INFO     | current chi2=0.9461267718413036 (change=4.774717048698168 %)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,665 | INFO     | left removable region: 15
[2026-04-11 12:34:54] 2026-04-11 10:33:40,665 | INFO     | sum of square deviations: 2912836010.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,667 | INFO     | sum of deviations: -29791582051.000004
[2026-04-11 12:34:54] 2026-04-11 10:33:40,667 | INFO     | mean x (centered): 0.0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,667 | INFO     | mean y: 2526790.4549763035
[2026-04-11 12:34:54] 2026-04-11 10:33:40,668 | INFO     | intersect: 2526790.4549763035
[2026-04-11 12:34:54] 2026-04-11 10:33:40,668 | INFO     | chi2: 0.15557382593648061
[2026-04-11 12:34:54] 2026-04-11 10:33:40,668 | INFO     | current memory leak: -10.23 B/s (using 211 data points, chi2=0.16)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | ..............................
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | . Timing measurements:
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | . get job = 0 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | . initial setup = 124 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,669 | INFO     | . payload setup = 218 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,670 | INFO     | . stage-in = 0 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,670 | INFO     | . payload execution = 14237 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,670 | INFO     | . stage-out = 4 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,670 | INFO     | . log creation = 1 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,670 | INFO     | ..............................
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | 
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | job summary report
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | --------------------------------------------------
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | PanDA job id: 7083313443
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | task id: 49263200
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | errors: (none)
[2026-04-11 12:34:54] 2026-04-11 10:33:40,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | pilot state: finished 
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | transexitcode: 0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | exeerrorcode: 0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | exeerrordiag: 
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | exitcode: 0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | exitmsg: OK
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | cpuconsumptiontime: 58547 s
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | nevents: 400
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | neventsw: 0
[2026-04-11 12:34:54] 2026-04-11 10:33:40,885 | INFO     | pid: 25534
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | pgrp: 25534
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | corecount: 8
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | event service: False
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | sizes: {0: 2279010, 1: 2279696, 2: 2280097, 3: 2281525, 13: 2281553, 14460: 2312494, 14465: 2321494, 14467: 2321550, 14469: 2321744}
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | --------------------------------------------------
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | 
[2026-04-11 12:34:54] 2026-04-11 10:33:40,886 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-11 12:34:54] 2026-04-11 10:33:41,179 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | job 7083313443 has completed (purged errors)
[2026-04-11 12:34:54] 2026-04-11 10:33:41,182 | INFO     | overall cleanup function is called
[2026-04-11 12:34:54] 2026-04-11 10:33:42,191 | INFO     | --- collectZombieJob: --- 10, [25534]
[2026-04-11 12:34:54] 2026-04-11 10:33:42,191 | INFO     | zombie collector waiting for pid 25534
[2026-04-11 12:34:54] 2026-04-11 10:33:42,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 12:34:54] 2026-04-11 10:33:42,191 | INFO     | collected zombie processes
[2026-04-11 12:34:54] 2026-04-11 10:33:42,191 | INFO     | will attempt to kill all subprocesses of pid=25534
[2026-04-11 12:34:54] 2026-04-11 10:33:42,274 | INFO     | process IDs to be killed: [25534] (in reverse order)
[2026-04-11 12:34:54] 2026-04-11 10:33:43,181 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 12:34:54] 2026-04-11 10:33:43,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 12:34:54] 2026-04-11 10:33:43,184 | INFO     | did not find any defunct processes belonging to 25534
[2026-04-11 12:34:54] 2026-04-11 10:33:43,185 | INFO     | did not find any defunct processes belonging to 25534
[2026-04-11 12:34:54] 2026-04-11 10:33:43,185 | INFO     | Ready for new job
[2026-04-11 12:34:54] 2026-04-11 10:33:43,187 | INFO     | **************************************
[2026-04-11 12:34:54] 2026-04-11 10:33:43,187 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 12:34:54] 2026-04-11 10:33:43,187 | INFO     | **************************************
[2026-04-11 12:34:54] 2026-04-11 10:33:43,187 | INFO     | 
[2026-04-11 12:34:54] 2026-04-11 10:33:43,188 | INFO     | pilot is running in a VM
[2026-04-11 12:34:54] 2026-04-11 10:33:43,188 | INFO     | architecture information:
[2026-04-11 12:34:54] 2026-04-11 10:33:43,195 | INFO     | executing command: cat /etc/os-release
[2026-04-11 12:34:54] 2026-04-11 10:33:43,536 | INFO     | cat /etc/os-release:
[2026-04-11 12:34:54] NAME="CentOS Linux"
[2026-04-11 12:34:54] VERSION="7 (Core)"
[2026-04-11 12:34:54] ID="centos"
[2026-04-11 12:34:54] ID_LIKE="rhel fedora"
[2026-04-11 12:34:54] VERSION_ID="7"
[2026-04-11 12:34:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 12:34:54] ANSI_COLOR="0;31"
[2026-04-11 12:34:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 12:34:54] HOME_URL="https://www.centos.org/"
[2026-04-11 12:34:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 12:34:54] 
[2026-04-11 12:34:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 12:34:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 12:34:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 12:34:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 12:34:54] 
[2026-04-11 12:34:54] 2026-04-11 10:33:43,536 | INFO     | **************************************
[2026-04-11 12:34:54] 2026-04-11 10:33:44,040 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-11 12:34:54] 2026-04-11 10:33:44,315 | INFO     | sufficient remaining disk space (498568527872 B)
[2026-04-11 12:34:54] 2026-04-11 10:33:44,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 12:34:54] 2026-04-11 10:33:44,316 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 12:34:54] 2026-04-11 10:33:44,316 | INFO     | update_server=False
[2026-04-11 12:34:54] 2026-04-11 10:33:44,316 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 12:34:54] 2026-04-11 10:33:44,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:34:54] 2026-04-11 10:33:44,317 | INFO     | aborting loop
[2026-04-11 12:34:54] 2026-04-11 10:33:44,660 | INFO     | all payload control threads have been joined
[2026-04-11 12:34:54] 2026-04-11 10:33:44,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 12:34:54] 2026-04-11 10:33:44,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 12:34:54] 2026-04-11 10:33:44,816 | INFO     | all data control threads have been joined
[2026-04-11 12:34:54] 2026-04-11 10:33:45,322 | INFO     | [job] retrieve thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,323 | INFO     | [job] job monitor thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,383 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,464 | INFO     | [payload] validate_post thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,482 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,517 | INFO     | [payload] failed_post thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,666 | INFO     | [payload] control thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,731 | INFO     | [job] validate thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,743 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:45,785 | INFO     | all job control threads have been joined
[2026-04-11 12:34:54] 2026-04-11 10:33:45,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:34:54] 2026-04-11 10:33:45,822 | INFO     | [data] control thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:46,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:46,591 | INFO     | [data] copytool_in thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:46,687 | INFO     | [data] copytool_out thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:46,791 | INFO     | [job] control thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:46,812 | INFO     | [job] queue monitor thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:33:48,726 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 12:34:54] 2026-04-11 10:34:13,118 | INFO     | PID=21096 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-11 12:34:54] 2026-04-11 10:34:13,118 | INFO     | .. there are 2 such processes running
[2026-04-11 12:34:54] 2026-04-11 10:34:13,119 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 12:34:54] 2026-04-11 10:34:13,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 12:34:54] 2026-04-11 10:34:13,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 12:34:54] 2026-04-11 10:34:42,627 | INFO     | [monitor] cgroup control has ended
[2026-04-11 12:34:54] 2026-04-11 10:34:44,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012720904000)>', '<ExcThread(monitor, started 140012293183232)>']
[2026-04-11 12:34:54] 2026-04-11 10:34:45,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 12:34:54] 2026-04-11 10:34:45,309 | INFO     | [monitor] control thread has ended
[2026-04-11 12:34:54] 2026-04-11 10:34:49,656 | INFO     | all workflow threads have been joined
[2026-04-11 12:34:54] 2026-04-11 10:34:49,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 12:34:54] 2026-04-11 10:34:49,656 | INFO     | traces error code: 0
[2026-04-11 12:34:54] 2026-04-11 10:34:49,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 12:34:54] 2026-04-11 10:34:50,191 [wrapper] ==== pilot stdout END ====
[2026-04-11 12:34:54] 2026-04-11 10:34:50,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 12:34:54] 2026-04-11 10:34:50,383 [wrapper] pilotpid: 21096
[2026-04-11 12:34:54] 2026-04-11 10:34:50,482 [wrapper] Pilot exit status: 0
[2026-04-11 12:34:54] 2026-04-11 10:34:50,789 [wrapper] pandaids: 7083313443
[2026-04-11 12:34:54] 2026-04-11 10:34:51,787 [wrapper] cleanup supervisor_pilot 10479 21097
[2026-04-11 12:34:54] 2026-04-11 10:34:51,802 [wrapper] Test setup, not cleaning
[2026-04-11 12:34:54] 2026-04-11 10:34:51,807 [wrapper] apfmon messages muted
[2026-04-11 12:34:54] 2026-04-11 10:34:51,811 [wrapper] ==== wrapper stdout END ====
[2026-04-11 12:34:54] 2026-04-11 10:34:51,814 [wrapper] ==== wrapper stderr END ====
[2026-04-11 12:34:54]  *** Error codes and diagnostics ***
[2026-04-11 12:34:54]     "exeErrorCode": 0,
[2026-04-11 12:34:54]     "pilotErrorCode": 0,
[2026-04-11 12:34:54]  *** Listing of results directory ***
[2026-04-11 12:34:54] total 415912
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc    644190 Apr 10 03:35 pilot3.tar.gz
[2026-04-11 12:34:54] -rwx------. 1 boinc boinc     36322 Apr 10 03:36 runpilot2-wrapper.sh
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc      5094 Apr 10 03:37 queuedata.json
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc       100 Apr 11 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 12:34:54] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 08:25 run_atlas
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc       105 Apr 11 08:25 job.xml
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc      6308 Apr 11 08:25 init_data.xml
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc 222493383 Apr 11 08:25 EVNT.49263198._000527.pool.root.1
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc     15665 Apr 11 08:25 start_atlas.sh
[2026-04-11 12:34:54] drwxrwx--x. 2 boinc boinc        68 Apr 11 08:25 shared
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc    656940 Apr 11 08:25 input.tar.gz
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc         0 Apr 11 08:25 boinc_lockfile
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc      2575 Apr 11 08:25 pandaJob.out
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc       415 Apr 11 08:32 workernode_map.json
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc    997844 Apr 11 08:32 agis_schedconf.cvmfs.json
[2026-04-11 12:34:54] drwx------. 5 boinc boinc      4096 Apr 11 08:32 pilot3
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc 195894493 Apr 11 12:32 HITS.49263200._030618.pool.root.1
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc       489 Apr 11 12:32 boinc_task_state.xml
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc      1020 Apr 11 12:33 memory_monitor_summary.json
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc   1511579 Apr 11 12:33 agis_ddmendpoints.agis.ALL.json
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc    387683 Apr 11 12:33 log.49263200._030618.job.log.tgz.1
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc      6347 Apr 11 12:33 heartbeat_new.json
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc      6238 Apr 11 12:33 heartbeat.json
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc        95 Apr 11 12:34 pilot_heartbeat.json
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc      8192 Apr 11 12:34 boinc_mmap_file
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc        28 Apr 11 12:34 wrapper_checkpoint.txt
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc      4880 Apr 11 12:34 pilotlog.txt
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc   1343414 Apr 11 12:34 log.49263200._030618.job.log.1
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc       357 Apr 11 12:34 output.list
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc       410 Apr 11 12:34 runtime_log
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc   1751040 Apr 11 12:34 result.tar.gz
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc      8454 Apr 11 12:34 runtime_log.err
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc       655 Apr 11 12:34 5438ec8a12b5.diag
[2026-04-11 12:34:54] -rw-r--r--. 1 boinc boinc     20655 Apr 11 12:34 stderr.txt
[2026-04-11 12:34:54] HITS file was successfully produced:
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc 195894493 Apr 11 12:32 shared/HITS.pool.root.1
[2026-04-11 12:34:54]  *** Contents of shared directory: ***
[2026-04-11 12:34:54] total 410956
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc 222493383 Apr 11 08:25 ATLAS.root_0
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc     15665 Apr 11 08:25 start_atlas.sh
[2026-04-11 12:34:54] -rw-r--r--. 2 boinc boinc    656940 Apr 11 08:25 input.tar.gz
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc 195894493 Apr 11 12:32 HITS.pool.root.1
[2026-04-11 12:34:54] -rw-------. 1 boinc boinc   1751040 Apr 11 12:34 result.tar.gz
12:34:56 (17111): run_atlas exited; CPU time 58693.811108
12:34:56 (17111): called boinc_finish(0)

</stderr_txt>
]]>

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