Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:56:54 (539252): wrapper (7.7.26015): starting
23:56:54 (539252): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 23:56:54] Arguments: --nthreads 4
[2026-04-11 23:56:54] Threads: 4
[2026-04-11 23:56:54] Checking for CVMFS
[2026-04-11 23:56:54] No cvmfs_config command found, will try listing directly
[2026-04-11 23:56:54] CVMFS is ok
[2026-04-11 23:56:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 23:56:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 23:56:54] Further information can be found at the LHC@home message board.
[2026-04-11 23:56:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 23:56:54] Checking for apptainer binary...
[2026-04-11 23:56:54] which: no apptainer in ((null))
[2026-04-11 23:56:54] apptainer is not installed, using version from CVMFS
[2026-04-11 23:56:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 23:56:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-11 23:56:54] apptainer works
[2026-04-11 23:56:54] Set ATHENA_PROC_NUMBER=4
[2026-04-11 23:56:54] Set ATHENA_CORE_NUMBER=4
[2026-04-11 23:56:54] Starting ATLAS job with PandaID=7085542268
[2026-04-11 23:56:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 02:41:41]  *** The last 200 lines of the pilot log: ***
[2026-04-12 02:41:41] 2026-04-12 00:41:06,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,410 | INFO     | log transfer has been attempted: DONE
[2026-04-12 02:41:41] 2026-04-12 00:41:06,410 | INFO     | job 7085542268 has finished - writing final server update
[2026-04-12 02:41:41] 2026-04-12 00:41:06,410 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_257209/.job.ad'
[2026-04-12 02:41:41] 2026-04-12 00:41:06,411 | INFO     | total number of processed events: 400 (read)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,435 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7085542268/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,435 | INFO     | extracted standard info from prmon json
[2026-04-12 02:41:41] 2026-04-12 00:41:06,435 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 02:41:41] 2026-04-12 00:41:06,435 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 02:41:41] 2026-04-12 00:41:06,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 02:41:41] 2026-04-12 00:41:06,439 | INFO     | fitting pss+swap vs Time
[2026-04-12 02:41:41] 2026-04-12 00:41:06,439 | INFO     | sum of square deviations: 1294014960.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,440 | INFO     | sum of deviations: 14385371787.000002
[2026-04-12 02:41:41] 2026-04-12 00:41:06,440 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,440 | INFO     | mean y: 2297529.9937888198
[2026-04-12 02:41:41] 2026-04-12 00:41:06,440 | INFO     | intersect: 2297529.9937888198
[2026-04-12 02:41:41] 2026-04-12 00:41:06,440 | INFO     | chi2: 2.130962742469736
[2026-04-12 02:41:41] 2026-04-12 00:41:06,441 | INFO     | sum of square deviations: 1177156955.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | sum of deviations: 23830050068.499996
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | mean y: 2309521.391025641
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | intersect: 2309521.391025641
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | chi2: 1.32109535171747
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | current chi2=1.32109535171747 (change=38.004765386636876 %)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,442 | INFO     | sum of square deviations: 1067554900.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,443 | INFO     | sum of deviations: 22922770991.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,443 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | mean y: 2308258.582781457
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | intersect: 2308258.582781457
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | chi2: 1.3218955262672605
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | current chi2=1.3218955262672605 (change=-0.06056902317840105 %)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | right removable region: 150
[2026-04-12 02:41:41] 2026-04-12 00:41:06,444 | INFO     | sum of square deviations: 1177156955.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,445 | INFO     | sum of deviations: -5295979618.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,445 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,445 | INFO     | mean y: 2322778.794871795
[2026-04-12 02:41:41] 2026-04-12 00:41:06,446 | INFO     | intersect: 2322778.794871795
[2026-04-12 02:41:41] 2026-04-12 00:41:06,446 | INFO     | chi2: 0.8393591778238917
[2026-04-12 02:41:41] 2026-04-12 00:41:06,446 | INFO     | current chi2=0.8393591778238917 (change=60.61126921200444 %)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,446 | INFO     | sum of square deviations: 1067554900.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,447 | INFO     | sum of deviations: -5280480555.000001
[2026-04-12 02:41:41] 2026-04-12 00:41:06,447 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,447 | INFO     | mean y: 2322722.927152318
[2026-04-12 02:41:41] 2026-04-12 00:41:06,447 | INFO     | intersect: 2322722.927152318
[2026-04-12 02:41:41] 2026-04-12 00:41:06,448 | INFO     | chi2: 0.8361353111540074
[2026-04-12 02:41:41] 2026-04-12 00:41:06,448 | INFO     | current chi2=0.8361353111540074 (change=0.38408666457218243 %)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,448 | INFO     | left removable region: 10
[2026-04-12 02:41:41] 2026-04-12 00:41:06,448 | INFO     | sum of square deviations: 850825255.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | sum of deviations: 3872724385.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | mean x (centered): 0.0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | mean y: 2335915.5142857144
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | intersect: 2335915.5142857144
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | chi2: 0.00148965574056543
[2026-04-12 02:41:41] 2026-04-12 00:41:06,449 | INFO     | current memory leak: 4.55 B/s (using 140 data points, chi2=0.00)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | could have reported an average CPU frequency of 2674 MHz (9 samples)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | ..............................
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . Timing measurements:
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . get job = 0 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . initial setup = 9 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . payload setup = 16 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . stage-in = 0 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . payload execution = 9792 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,450 | INFO     | . stage-out = 0 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,451 | INFO     | . log creation = 0 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,451 | INFO     | ..............................
[2026-04-12 02:41:41] 2026-04-12 00:41:06,644 | INFO     | 
[2026-04-12 02:41:41] 2026-04-12 00:41:06,644 | INFO     | job summary report
[2026-04-12 02:41:41] 2026-04-12 00:41:06,644 | INFO     | --------------------------------------------------
[2026-04-12 02:41:41] 2026-04-12 00:41:06,644 | INFO     | PanDA job id: 7085542268
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | task id: 49263208
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | errors: (none)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | pilot state: finished 
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | transexitcode: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | exeerrorcode: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | exeerrordiag: 
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | exitcode: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | exitmsg: OK
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | cpuconsumptiontime: 36984 s
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | nevents: 400
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | neventsw: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:06,645 | INFO     | pid: 549157
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | pgrp: 549157
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | corecount: 4
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | event service: False
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | sizes: {0: 2279905, 1: 2281479, 11: 2281507, 9813: 2310577, 9814: 2319597, 9815: 2319653, 9816: 2320039}
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | --------------------------------------------------
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | 
[2026-04-12 02:41:41] 2026-04-12 00:41:06,646 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-04-12 02:41:41] 2026-04-12 00:41:06,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | job 7085542268 has completed (purged errors)
[2026-04-12 02:41:41] 2026-04-12 00:41:06,678 | INFO     | overall cleanup function is called
[2026-04-12 02:41:41] 2026-04-12 00:41:07,687 | INFO     | --- collectZombieJob: --- 10, [549157]
[2026-04-12 02:41:41] 2026-04-12 00:41:07,687 | INFO     | zombie collector waiting for pid 549157
[2026-04-12 02:41:41] 2026-04-12 00:41:07,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 02:41:41] 2026-04-12 00:41:07,687 | INFO     | collected zombie processes
[2026-04-12 02:41:41] 2026-04-12 00:41:07,688 | INFO     | will attempt to kill all subprocesses of pid=549157
[2026-04-12 02:41:41] 2026-04-12 00:41:08,539 | INFO     | process IDs to be killed: [549157] (in reverse order)
[2026-04-12 02:41:41] 2026-04-12 00:41:08,888 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 02:41:41] 2026-04-12 00:41:08,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 02:41:41] 2026-04-12 00:41:08,922 | INFO     | did not find any defunct processes belonging to 549157
[2026-04-12 02:41:41] 2026-04-12 00:41:08,953 | INFO     | did not find any defunct processes belonging to 549157
[2026-04-12 02:41:41] 2026-04-12 00:41:08,954 | INFO     | Ready for new job
[2026-04-12 02:41:41] 2026-04-12 00:41:08,956 | INFO     | **************************************
[2026-04-12 02:41:41] 2026-04-12 00:41:08,956 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 02:41:41] 2026-04-12 00:41:08,956 | INFO     | **************************************
[2026-04-12 02:41:41] 2026-04-12 00:41:08,956 | INFO     | 
[2026-04-12 02:41:41] 2026-04-12 00:41:08,965 | INFO     | architecture information:
[2026-04-12 02:41:41] 2026-04-12 00:41:08,965 | INFO     | executing command: cat /etc/os-release
[2026-04-12 02:41:41] 2026-04-12 00:41:08,989 | INFO     | cat /etc/os-release:
[2026-04-12 02:41:41] NAME="CentOS Linux"
[2026-04-12 02:41:41] VERSION="7 (Core)"
[2026-04-12 02:41:41] ID="centos"
[2026-04-12 02:41:41] ID_LIKE="rhel fedora"
[2026-04-12 02:41:41] VERSION_ID="7"
[2026-04-12 02:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 02:41:41] ANSI_COLOR="0;31"
[2026-04-12 02:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 02:41:41] HOME_URL="https://www.centos.org/"
[2026-04-12 02:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 02:41:41] 
[2026-04-12 02:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 02:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 02:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 02:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 02:41:41] 
[2026-04-12 02:41:41] 2026-04-12 00:41:08,990 | INFO     | **************************************
[2026-04-12 02:41:41] 2026-04-12 00:41:09,492 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-04-12 02:41:41] 2026-04-12 00:41:09,522 | INFO     | sufficient remaining disk space (219559231488 B)
[2026-04-12 02:41:41] 2026-04-12 00:41:09,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 02:41:41] 2026-04-12 00:41:09,522 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 02:41:41] 2026-04-12 00:41:09,523 | INFO     | update_server=False
[2026-04-12 02:41:41] 2026-04-12 00:41:09,523 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 02:41:41] 2026-04-12 00:41:09,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 02:41:41] 2026-04-12 00:41:09,523 | INFO     | aborting loop
[2026-04-12 02:41:41] 2026-04-12 00:41:09,753 | INFO     | all job control threads have been joined
[2026-04-12 02:41:41] 2026-04-12 00:41:09,815 | INFO     | all payload control threads have been joined
[2026-04-12 02:41:41] 2026-04-12 00:41:10,059 | INFO     | all data control threads have been joined
[2026-04-12 02:41:41] 2026-04-12 00:41:10,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 02:41:41] 2026-04-12 00:41:10,528 | INFO     | [job] retrieve thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,529 | INFO     | [job] job monitor thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,551 | INFO     | [job] validate thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,609 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,758 | INFO     | [job] control thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,820 | INFO     | [payload] control thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:10,858 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,063 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,065 | INFO     | [data] control thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,108 | INFO     | [payload] validate_post thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,516 | INFO     | [payload] failed_post thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,541 | INFO     | [data] copytool_in thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:11,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 02:41:41] 2026-04-12 00:41:12,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 02:41:41] 2026-04-12 00:41:12,489 | INFO     | [data] copytool_out thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:12,559 | INFO     | [job] queue monitor thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:16,010 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:19,787 | INFO     | job.realtimelogging is not enabled
[2026-04-12 02:41:41] 2026-04-12 00:41:20,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 02:41:41] 2026-04-12 00:41:35,239 | INFO     | [monitor] cgroup control has ended
[2026-04-12 02:41:41] 2026-04-12 00:41:35,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22549472614208)>', '<ExcThread(monitor, started 22549236041472)>']
[2026-04-12 02:41:41] 2026-04-12 00:41:39,677 | INFO     | PID=543915 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-12 02:41:41] 2026-04-12 00:41:39,677 | INFO     | .. there are 22 such processes running
[2026-04-12 02:41:41] 2026-04-12 00:41:39,678 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 02:41:41] 2026-04-12 00:41:39,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 02:41:41] 2026-04-12 00:41:39,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 02:41:41] 2026-04-12 00:41:39,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 02:41:41] 2026-04-12 00:41:39,679 | INFO     | [monitor] control thread has ended
[2026-04-12 02:41:41] 2026-04-12 00:41:40,885 | INFO     | all workflow threads have been joined
[2026-04-12 02:41:41] 2026-04-12 00:41:40,885 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 02:41:41] 2026-04-12 00:41:40,886 | INFO     | traces error code: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:40,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 02:41:41] 2026-04-12 00:41:41,025 [wrapper] ==== pilot stdout END ====
[2026-04-12 02:41:41] 2026-04-12 00:41:41,030 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 02:41:41] 2026-04-12 00:41:41,034 [wrapper] pilotpid: 543915
[2026-04-12 02:41:41] 2026-04-12 00:41:41,038 [wrapper] Pilot exit status: 0
[2026-04-12 02:41:41] 2026-04-12 00:41:41,054 [wrapper] pandaids: 7085542268
[2026-04-12 02:41:41] 2026-04-12 00:41:41,264 [wrapper] cleanup supervisor_pilot  904712 543916
[2026-04-12 02:41:41] 2026-04-12 00:41:41,269 [wrapper] Test setup, not cleaning
[2026-04-12 02:41:41] 2026-04-12 00:41:41,273 [wrapper] apfmon messages muted
[2026-04-12 02:41:41] 2026-04-12 00:41:41,277 [wrapper] ==== wrapper stdout END ====
[2026-04-12 02:41:41] 2026-04-12 00:41:41,280 [wrapper] ==== wrapper stderr END ====
[2026-04-12 02:41:41]  *** Error codes and diagnostics ***
[2026-04-12 02:41:41]     "exeErrorCode": 0,
[2026-04-12 02:41:41]     "pilotErrorCode": 0,
[2026-04-12 02:41:41]  *** Listing of results directory ***
[2026-04-12 02:41:41] total 416340
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc    644190 Apr 10 19:48 pilot3.tar.gz
[2026-04-12 02:41:41] -rwx------. 1 boinc boinc     36322 Apr 10 19:52 runpilot2-wrapper.sh
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc      5094 Apr 10 19:57 queuedata.json
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc       100 Apr 11 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 02:41:41] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 23:56 run_atlas
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc       105 Apr 11 23:56 job.xml
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc      6539 Apr 11 23:56 init_data.xml
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc 224433175 Apr 11 23:56 EVNT.49263206._000732.pool.root.1
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc     15665 Apr 11 23:56 start_atlas.sh
[2026-04-12 02:41:41] drwxrwx--x. 2 boinc boinc      4096 Apr 11 23:56 shared
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc    656934 Apr 11 23:56 input.tar.gz
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc         0 Apr 11 23:56 boinc_lockfile
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc      2575 Apr 11 23:56 pandaJob.out
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc    997815 Apr 11 23:57 agis_schedconf.cvmfs.json
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc   1511579 Apr 11 23:57 agis_ddmendpoints.agis.ALL.json
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc       440 Apr 11 23:57 workernode_map.json
[2026-04-12 02:41:41] drwx------. 5 boinc boinc      4096 Apr 11 23:57 pilot3
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc 195416835 Apr 12 02:40 HITS.49263208._030626.pool.root.1
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc       487 Apr 12 02:40 boinc_task_state.xml
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc      1043 Apr 12 02:41 memory_monitor_summary.json
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc    292979 Apr 12 02:41 log.49263208._030626.job.log.tgz.1
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc      6369 Apr 12 02:41 heartbeat_new.json
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc      6260 Apr 12 02:41 heartbeat.json
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc      8192 Apr 12 02:41 boinc_mmap_file
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc        27 Apr 12 02:41 wrapper_checkpoint.txt
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc        95 Apr 12 02:41 pilot_heartbeat.json
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc      4900 Apr 12 02:41 pilotlog.txt
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc    917144 Apr 12 02:41 log.49263208._030626.job.log.1
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc       357 Apr 12 02:41 output.list
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc       410 Apr 12 02:41 runtime_log
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc   1228800 Apr 12 02:41 result.tar.gz
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc      8826 Apr 12 02:41 runtime_log.err
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc       663 Apr 12 02:41 38c2821a533a.diag
[2026-04-12 02:41:41] -rw-r--r--. 1 boinc boinc     20794 Apr 12 02:41 stderr.txt
[2026-04-12 02:41:41] HITS file was successfully produced:
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc 195416835 Apr 12 02:40 shared/HITS.pool.root.1
[2026-04-12 02:41:41]  *** Contents of shared directory: ***
[2026-04-12 02:41:41] total 411884
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc 224433175 Apr 11 23:56 ATLAS.root_0
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc     15665 Apr 11 23:56 start_atlas.sh
[2026-04-12 02:41:41] -rw-r--r--. 2 boinc boinc    656934 Apr 11 23:56 input.tar.gz
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc 195416835 Apr 12 02:40 HITS.pool.root.1
[2026-04-12 02:41:41] -rw-------. 1 boinc boinc   1228800 Apr 12 02:41 result.tar.gz
02:41:43 (539252): run_atlas exited; CPU time 37599.863736
02:41:43 (539252): called boinc_finish(0)

</stderr_txt>
]]>

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