Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:59:46 (2146569): wrapper (7.7.26015): starting
10:59:46 (2146569): wrapper: running run_atlas (--nthreads 4)
[2026-04-12 10:59:46] Arguments: --nthreads 4
[2026-04-12 10:59:46] Threads: 4
[2026-04-12 10:59:46] Checking for CVMFS
[2026-04-12 10:59:46] No cvmfs_config command found, will try listing directly
[2026-04-12 10:59:46] CVMFS is ok
[2026-04-12 10:59:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 10:59:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 10:59:46] Further information can be found at the LHC@home message board.
[2026-04-12 10:59:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 10:59:46] Checking for apptainer binary...
[2026-04-12 10:59:46] which: no apptainer in ((null))
[2026-04-12 10:59:46] apptainer is not installed, using version from CVMFS
[2026-04-12 10:59:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 10:59:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-12 10:59:46] apptainer works
[2026-04-12 10:59:46] Set ATHENA_PROC_NUMBER=4
[2026-04-12 10:59:46] Set ATHENA_CORE_NUMBER=4
[2026-04-12 10:59:46] Starting ATLAS job with PandaID=7085542160
[2026-04-12 10:59:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 13:49:33]  *** The last 200 lines of the pilot log: ***
[2026-04-12 13:49:33] 2026-04-12 11:48:23,699 | INFO     | this job has now completed (state=finished)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,699 | INFO     | log transfer has been attempted: DONE
[2026-04-12 13:49:33] 2026-04-12 11:48:23,714 | INFO     | job 7085542160 has finished - writing final server update
[2026-04-12 13:49:33] 2026-04-12 11:48:23,722 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_257209/.job.ad'
[2026-04-12 13:49:33] 2026-04-12 11:48:23,722 | INFO     | total number of processed events: 400 (read)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,756 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7085542160/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,757 | INFO     | extracted standard info from prmon json
[2026-04-12 13:49:33] 2026-04-12 11:48:23,757 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 13:49:33] 2026-04-12 11:48:23,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 13:49:33] 2026-04-12 11:48:23,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 13:49:33] 2026-04-12 11:48:23,760 | INFO     | fitting pss+swap vs Time
[2026-04-12 13:49:33] 2026-04-12 11:48:23,761 | INFO     | sum of square deviations: 1392881930.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,765 | INFO     | sum of deviations: 22163857120.000004
[2026-04-12 13:49:33] 2026-04-12 11:48:23,765 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,765 | INFO     | mean y: 2310540.036363636
[2026-04-12 13:49:33] 2026-04-12 11:48:23,765 | INFO     | intersect: 2310540.036363636
[2026-04-12 13:49:33] 2026-04-12 11:48:23,765 | INFO     | chi2: 1.3638842276946679
[2026-04-12 13:49:33] 2026-04-12 11:48:23,766 | INFO     | sum of square deviations: 1270051720.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | sum of deviations: 21394055816.499992
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | mean y: 2309583.99375
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | intersect: 2309583.99375
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | chi2: 1.3649495492766202
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | current chi2=1.3649495492766202 (change=-0.07810938496978977 %)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,767 | INFO     | right removable region: 159
[2026-04-12 13:49:33] 2026-04-12 11:48:23,768 | INFO     | sum of square deviations: 1270051720.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | sum of deviations: 616539718.5
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | mean y: 2336884.90625
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | intersect: 2336884.90625
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | chi2: 0.006785878990417868
[2026-04-12 13:49:33] 2026-04-12 11:48:23,769 | INFO     | current chi2=0.006785878990417868 (change=99.50245931050263 %)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,770 | INFO     | sum of square deviations: 1154663510.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,770 | INFO     | sum of deviations: 1408753336.9999995
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | mean y: 2335829.2967741936
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | intersect: 2335829.2967741936
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | chi2: 0.005336279921796037
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | current chi2=0.005336279921796037 (change=21.36199408608325 %)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,771 | INFO     | left removable region: 10
[2026-04-12 13:49:33] 2026-04-12 11:48:23,772 | INFO     | sum of square deviations: 1025693650.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,772 | INFO     | sum of deviations: 1258271888.0000002
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | mean x (centered): 0.0
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | mean y: 2335615.6577181206
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | intersect: 2335615.6577181206
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | chi2: 0.005336276239840324
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | current memory leak: 1.23 B/s (using 149 data points, chi2=0.01)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,773 | INFO     | could have reported an average CPU frequency of 2680 MHz (9 samples)
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | ..............................
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . Timing measurements:
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . get job = 0 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . initial setup = 8 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . payload setup = 15 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . stage-in = 0 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . payload execution = 10058 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . stage-out = 0 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | . log creation = 0 s
[2026-04-12 13:49:33] 2026-04-12 11:48:23,774 | INFO     | ..............................
[2026-04-12 13:49:33] 2026-04-12 11:48:24,344 | INFO     | 
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | job summary report
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | --------------------------------------------------
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | PanDA job id: 7085542160
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | task id: 49263208
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | errors: (none)
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 13:49:33] 2026-04-12 11:48:24,345 | INFO     | pilot state: finished 
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | transexitcode: 0
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | exeerrorcode: 0
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | exeerrordiag: 
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | exitcode: 0
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | exitmsg: OK
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | cpuconsumptiontime: 38221 s
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | nevents: 400
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | neventsw: 0
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | pid: 2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:24,346 | INFO     | pgrp: 2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | corecount: 4
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | event service: False
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | sizes: {0: 2279678, 1: 2281507, 11: 2281507, 10078: 2310662, 10080: 2319738, 10083: 2319940}
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | --------------------------------------------------
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | 
[2026-04-12 13:49:33] 2026-04-12 11:48:24,347 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-04-12 13:49:33] 2026-04-12 11:48:24,379 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,381 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 13:49:33] 2026-04-12 11:48:24,382 | INFO     | job 7085542160 has completed (purged errors)
[2026-04-12 13:49:33] 2026-04-12 11:48:24,382 | INFO     | overall cleanup function is called
[2026-04-12 13:49:33] 2026-04-12 11:48:25,397 | INFO     | --- collectZombieJob: --- 10, [2156388]
[2026-04-12 13:49:33] 2026-04-12 11:48:25,398 | INFO     | zombie collector waiting for pid 2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:25,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 13:49:33] 2026-04-12 11:48:25,398 | INFO     | collected zombie processes
[2026-04-12 13:49:33] 2026-04-12 11:48:25,398 | INFO     | will attempt to kill all subprocesses of pid=2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:25,673 | INFO     | number of running child processes to parent process 2156388: 1
[2026-04-12 13:49:33] 2026-04-12 11:48:25,673 | INFO     | maximum number of monitored processes: 6
[2026-04-12 13:49:33] 2026-04-12 11:48:25,674 | INFO     | aborting job monitoring since job object (job id=7085542160) has expired
[2026-04-12 13:49:33] 2026-04-12 11:48:26,406 | INFO     | PID=2150619 has CPU usage=25.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-12 13:49:33] 2026-04-12 11:48:26,407 | INFO     | .. there are 23 such processes running
[2026-04-12 13:49:33] 2026-04-12 11:48:26,774 | INFO     | process IDs to be killed: [2156388] (in reverse order)
[2026-04-12 13:49:33] 2026-04-12 11:48:27,119 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 13:49:33] 2026-04-12 11:48:27,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 13:49:33] 2026-04-12 11:48:27,148 | INFO     | did not find any defunct processes belonging to 2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:27,174 | INFO     | did not find any defunct processes belonging to 2156388
[2026-04-12 13:49:33] 2026-04-12 11:48:27,175 | INFO     | Ready for new job
[2026-04-12 13:49:33] 2026-04-12 11:48:27,177 | INFO     | **************************************
[2026-04-12 13:49:33] 2026-04-12 11:48:27,177 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 13:49:33] 2026-04-12 11:48:27,177 | INFO     | **************************************
[2026-04-12 13:49:33] 2026-04-12 11:48:27,177 | INFO     | 
[2026-04-12 13:49:33] 2026-04-12 11:48:27,186 | INFO     | architecture information:
[2026-04-12 13:49:33] 2026-04-12 11:48:27,186 | INFO     | executing command: cat /etc/os-release
[2026-04-12 13:49:33] 2026-04-12 11:48:27,211 | INFO     | cat /etc/os-release:
[2026-04-12 13:49:33] NAME="CentOS Linux"
[2026-04-12 13:49:33] VERSION="7 (Core)"
[2026-04-12 13:49:33] ID="centos"
[2026-04-12 13:49:33] ID_LIKE="rhel fedora"
[2026-04-12 13:49:33] VERSION_ID="7"
[2026-04-12 13:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 13:49:33] ANSI_COLOR="0;31"
[2026-04-12 13:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 13:49:33] HOME_URL="https://www.centos.org/"
[2026-04-12 13:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 13:49:33] 
[2026-04-12 13:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 13:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 13:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 13:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 13:49:33] 
[2026-04-12 13:49:33] 2026-04-12 11:48:27,212 | INFO     | **************************************
[2026-04-12 13:49:33] 2026-04-12 11:48:27,715 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-04-12 13:49:33] 2026-04-12 11:48:27,739 | INFO     | sufficient remaining disk space (217151700992 B)
[2026-04-12 13:49:33] 2026-04-12 11:48:27,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 13:49:33] 2026-04-12 11:48:27,739 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 13:49:33] 2026-04-12 11:48:27,740 | INFO     | update_server=False
[2026-04-12 13:49:33] 2026-04-12 11:48:27,740 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 13:49:33] 2026-04-12 11:48:28,177 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-12 13:49:33] 2026-04-12 11:48:28,177 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-12 13:49:33] 2026-04-12 11:48:28,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 13:49:33] 2026-04-12 11:48:28,178 | INFO     | will abort loop
[2026-04-12 13:49:33] 2026-04-12 11:48:28,297 | INFO     | all data control threads have been joined
[2026-04-12 13:49:33] 2026-04-12 11:48:28,445 | INFO     | all job control threads have been joined
[2026-04-12 13:49:33] 2026-04-12 11:48:28,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 13:49:33] 2026-04-12 11:48:28,745 | INFO     | [job] retrieve thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:28,834 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:28,836 | INFO     | [payload] failed_post thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:28,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 13:49:33] 2026-04-12 11:48:29,026 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,073 | INFO     | [data] copytool_in thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,145 | INFO     | all payload control threads have been joined
[2026-04-12 13:49:33] 2026-04-12 11:48:29,182 | INFO     | [job] job monitor thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,302 | INFO     | [data] control thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,450 | INFO     | [job] control thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,698 | INFO     | [payload] validate_post thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,708 | INFO     | [job] validate thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:29,907 | INFO     | [job] queue monitor thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:30,101 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:30,150 | INFO     | [payload] control thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:30,625 | INFO     | [data] copytool_out thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:31,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 13:49:33] 2026-04-12 11:48:35,207 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 13:49:33] 2026-04-12 11:48:59,485 | INFO     | PID=2150619 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 13:49:33] 2026-04-12 11:48:59,486 | INFO     | .. there are 23 such processes running
[2026-04-12 13:49:33] 2026-04-12 11:48:59,487 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 13:49:33] 2026-04-12 11:48:59,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 13:49:33] 2026-04-12 11:48:59,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 13:49:33] 2026-04-12 11:49:26,205 | INFO     | [monitor] cgroup control has ended
[2026-04-12 13:49:33] 2026-04-12 11:49:28,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23342133593920)>', '<ExcThread(monitor, started 23341896578816)>']
[2026-04-12 13:49:33] 2026-04-12 11:49:28,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 13:49:33] 2026-04-12 11:49:28,632 | INFO     | [monitor] control thread has ended
[2026-04-12 13:49:33] 2026-04-12 11:49:33,150 | INFO     | all workflow threads have been joined
[2026-04-12 13:49:33] 2026-04-12 11:49:33,150 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 13:49:33] 2026-04-12 11:49:33,150 | INFO     | traces error code: 0
[2026-04-12 13:49:33] 2026-04-12 11:49:33,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 13:49:33] 2026-04-12 11:49:33,302 [wrapper] ==== pilot stdout END ====
[2026-04-12 13:49:33] 2026-04-12 11:49:33,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 13:49:33] 2026-04-12 11:49:33,308 [wrapper] pilotpid: 2150619
[2026-04-12 13:49:33] 2026-04-12 11:49:33,311 [wrapper] Pilot exit status: 0
[2026-04-12 13:49:33] 2026-04-12 11:49:33,361 [wrapper] pandaids: 7085542160
[2026-04-12 13:49:33] 2026-04-12 11:49:33,568 [wrapper] cleanup supervisor_pilot 2557518 2150620
[2026-04-12 13:49:33] 2026-04-12 11:49:33,573 [wrapper] Test setup, not cleaning
[2026-04-12 13:49:33] 2026-04-12 11:49:33,577 [wrapper] apfmon messages muted
[2026-04-12 13:49:33] 2026-04-12 11:49:33,588 [wrapper] ==== wrapper stdout END ====
[2026-04-12 13:49:33] 2026-04-12 11:49:33,592 [wrapper] ==== wrapper stderr END ====
[2026-04-12 13:49:33]  *** Error codes and diagnostics ***
[2026-04-12 13:49:33]     "exeErrorCode": 0,
[2026-04-12 13:49:33]     "pilotErrorCode": 0,
[2026-04-12 13:49:33]  *** Listing of results directory ***
[2026-04-12 13:49:33] total 412652
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc    644190 Apr 10 19:48 pilot3.tar.gz
[2026-04-12 13:49:33] -rwx------. 1 boinc boinc     36322 Apr 10 19:51 runpilot2-wrapper.sh
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc      5094 Apr 10 19:57 queuedata.json
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc       100 Apr 12 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 13:49:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 10:59 run_atlas
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc       105 Apr 12 10:59 job.xml
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc 221484299 Apr 12 10:59 EVNT.49263206._000730.pool.root.1
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc      6539 Apr 12 10:59 init_data.xml
[2026-04-12 13:49:33] drwxrwx--x. 2 boinc boinc      4096 Apr 12 10:59 shared
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc    656933 Apr 12 10:59 input.tar.gz
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc     15665 Apr 12 10:59 start_atlas.sh
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc         0 Apr 12 10:59 boinc_lockfile
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc      2575 Apr 12 10:59 pandaJob.out
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc    997759 Apr 12 11:00 agis_schedconf.cvmfs.json
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc   1511579 Apr 12 11:00 agis_ddmendpoints.agis.ALL.json
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc       443 Apr 12 11:00 workernode_map.json
[2026-04-12 13:49:33] drwx------. 5 boinc boinc      4096 Apr 12 11:00 pilot3
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc 194553379 Apr 12 13:47 HITS.49263208._030576.pool.root.1
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc       488 Apr 12 13:47 boinc_task_state.xml
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc      1030 Apr 12 13:48 memory_monitor_summary.json
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc    293436 Apr 12 13:48 log.49263208._030576.job.log.tgz.1
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc      6376 Apr 12 13:48 heartbeat_new.json
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc      6267 Apr 12 13:48 heartbeat.json
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc        95 Apr 12 13:48 pilot_heartbeat.json
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc        28 Apr 12 13:49 wrapper_checkpoint.txt
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc      8192 Apr 12 13:49 boinc_mmap_file
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc      5015 Apr 12 13:49 pilotlog.txt
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc    933129 Apr 12 13:49 log.49263208._030576.job.log.1
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc       357 Apr 12 13:49 output.list
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc       410 Apr 12 13:49 runtime_log
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc   1249280 Apr 12 13:49 result.tar.gz
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc      8827 Apr 12 13:49 runtime_log.err
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc       665 Apr 12 13:49 38b93b0e0066.diag
[2026-04-12 13:49:33] -rw-r--r--. 1 boinc boinc     21060 Apr 12 13:49 stderr.txt
[2026-04-12 13:49:33] HITS file was successfully produced:
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc 194553379 Apr 12 13:47 shared/HITS.pool.root.1
[2026-04-12 13:49:33]  *** Contents of shared directory: ***
[2026-04-12 13:49:33] total 408180
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc 221484299 Apr 12 10:59 ATLAS.root_0
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc    656933 Apr 12 10:59 input.tar.gz
[2026-04-12 13:49:33] -rw-r--r--. 2 boinc boinc     15665 Apr 12 10:59 start_atlas.sh
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc 194553379 Apr 12 13:47 HITS.pool.root.1
[2026-04-12 13:49:33] -rw-------. 1 boinc boinc   1249280 Apr 12 13:49 result.tar.gz
13:49:35 (2146569): run_atlas exited; CPU time 38871.117348
13:49:35 (2146569): called boinc_finish(0)

</stderr_txt>
]]>

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