Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:36:02 (29695): wrapper (7.7.26015): starting
04:36:02 (29695): wrapper: running run_atlas (--nthreads 8)
[2026-04-11 04:36:02] Arguments: --nthreads 8
[2026-04-11 04:36:02] Threads: 8
[2026-04-11 04:36:02] Checking for CVMFS
[2026-04-11 04:36:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 04:36:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 04:36:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 04:36:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 04:36:07] 2.11.2.0 4392 13721 100688 158328 2 53 21012712 25165824 4688 130560 0 4623569 99.951 1312436 4965 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-11 04:36:07] CVMFS is ok
[2026-04-11 04:36:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 04:36:07] Checking for apptainer binary...
[2026-04-11 04:36:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 04:36:07] Running /usr/bin/apptainer --version
[2026-04-11 04:36:07] apptainer version 1.3.2-1.el7
[2026-04-11 04:36:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 04:36:22] cg-vwn449.simple-grid.lan
[2026-04-11 04:36:22] apptainer works
[2026-04-11 04:36:22] Set ATHENA_PROC_NUMBER=8
[2026-04-11 04:36:22] Set ATHENA_CORE_NUMBER=8
[2026-04-11 04:36:22] Starting ATLAS job with PandaID=7085529049
[2026-04-11 04:36:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 09:14:22]  *** The last 200 lines of the pilot log: ***
[2026-04-11 09:14:22] 2026-04-11 07:13:38,731 | INFO     | log transfer has been attempted: DONE
[2026-04-11 09:14:22] 2026-04-11 07:13:38,731 | INFO     | job 7085529049 has finished - writing final server update
[2026-04-11 09:14:22] 2026-04-11 07:13:38,731 | INFO     | total number of processed events: 400 (read)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,741 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7085529049/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,742 | INFO     | extracted standard info from prmon json
[2026-04-11 09:14:22] 2026-04-11 07:13:38,742 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 09:14:22] 2026-04-11 07:13:38,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 09:14:22] 2026-04-11 07:13:38,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 09:14:22] 2026-04-11 07:13:38,748 | INFO     | fitting pss+swap vs Time
[2026-04-11 09:14:22] 2026-04-11 07:13:38,748 | INFO     | sum of square deviations: 5576683165.5
[2026-04-11 09:14:22] 2026-04-11 07:13:38,751 | INFO     | sum of deviations: 69402709984.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,751 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,751 | INFO     | mean y: 2448917.6870229007
[2026-04-11 09:14:22] 2026-04-11 07:13:38,751 | INFO     | intersect: 2448917.6870229007
[2026-04-11 09:14:22] 2026-04-11 07:13:38,752 | INFO     | chi2: 6.129466297252392
[2026-04-11 09:14:22] 2026-04-11 07:13:38,752 | INFO     | sum of square deviations: 5263458688.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,754 | INFO     | sum of deviations: 86160642672.00002
[2026-04-11 09:14:22] 2026-04-11 07:13:38,754 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,755 | INFO     | mean y: 2456939.1712062256
[2026-04-11 09:14:22] 2026-04-11 07:13:38,755 | INFO     | intersect: 2456939.1712062256
[2026-04-11 09:14:22] 2026-04-11 07:13:38,755 | INFO     | chi2: 5.321616373257554
[2026-04-11 09:14:22] 2026-04-11 07:13:38,755 | INFO     | current chi2=5.321616373257554 (change=13.179775935091879 %)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,755 | INFO     | right removable region: 256
[2026-04-11 09:14:22] 2026-04-11 07:13:38,756 | INFO     | sum of square deviations: 5263458688.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,758 | INFO     | sum of deviations: -19815016618.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,758 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,758 | INFO     | mean y: 2492314.19844358
[2026-04-11 09:14:22] 2026-04-11 07:13:38,758 | INFO     | intersect: 2492314.19844358
[2026-04-11 09:14:22] 2026-04-11 07:13:38,759 | INFO     | chi2: 1.607332050639184
[2026-04-11 09:14:22] 2026-04-11 07:13:38,759 | INFO     | current chi2=1.607332050639184 (change=73.77696568199273 %)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,759 | INFO     | sum of square deviations: 4962187923.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,762 | INFO     | sum of deviations: -44679401505.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,762 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,762 | INFO     | mean y: 2504794.5476190476
[2026-04-11 09:14:22] 2026-04-11 07:13:38,762 | INFO     | intersect: 2504794.5476190476
[2026-04-11 09:14:22] 2026-04-11 07:13:38,763 | INFO     | chi2: 1.0392758850046147
[2026-04-11 09:14:22] 2026-04-11 07:13:38,763 | INFO     | current chi2=1.0392758850046147 (change=35.34155655072465 %)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,763 | INFO     | sum of square deviations: 4672638308.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,765 | INFO     | sum of deviations: -41515667676.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,766 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,766 | INFO     | mean y: 2503099.5344129554
[2026-04-11 09:14:22] 2026-04-11 07:13:38,766 | INFO     | intersect: 2503099.5344129554
[2026-04-11 09:14:22] 2026-04-11 07:13:38,766 | INFO     | chi2: 1.0236389368518766
[2026-04-11 09:14:22] 2026-04-11 07:13:38,766 | INFO     | current chi2=1.0236389368518766 (change=1.5046003066518427 %)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,767 | INFO     | left removable region: 15
[2026-04-11 09:14:22] 2026-04-11 07:13:38,767 | INFO     | sum of square deviations: 4340323240.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,769 | INFO     | sum of deviations: -23585905590.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,769 | INFO     | mean x (centered): 0.0
[2026-04-11 09:14:22] 2026-04-11 07:13:38,770 | INFO     | mean y: 2512779.323651452
[2026-04-11 09:14:22] 2026-04-11 07:13:38,770 | INFO     | intersect: 2512779.323651452
[2026-04-11 09:14:22] 2026-04-11 07:13:38,770 | INFO     | chi2: 0.14598882490873116
[2026-04-11 09:14:22] 2026-04-11 07:13:38,770 | INFO     | current memory leak: -5.43 B/s (using 241 data points, chi2=0.15)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,771 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-04-11 09:14:22] 2026-04-11 07:13:38,771 | INFO     | ..............................
[2026-04-11 09:14:22] 2026-04-11 07:13:38,771 | INFO     | . Timing measurements:
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . get job = 0 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . initial setup = 100 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . payload setup = 185 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . stage-in = 0 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . payload execution = 16108 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . stage-out = 3 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | . log creation = 1 s
[2026-04-11 09:14:22] 2026-04-11 07:13:38,772 | INFO     | ..............................
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | 
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | job summary report
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | --------------------------------------------------
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | PanDA job id: 7085529049
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | task id: 49263200
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | errors: (none)
[2026-04-11 09:14:22] 2026-04-11 07:13:39,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | pilot state: finished 
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | transexitcode: 0
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | exeerrorcode: 0
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | exeerrordiag: 
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | exitcode: 0
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | exitmsg: OK
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | cpuconsumptiontime: 61589 s
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | nevents: 400
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | neventsw: 0
[2026-04-11 09:14:22] 2026-04-11 07:13:39,191 | INFO     | pid: 5979
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | pgrp: 5979
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | corecount: 8
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | event service: False
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | sizes: {0: 2279008, 1: 2242809, 2: 2281522, 12: 2281522, 16298: 2312801, 16299: 2312800, 16302: 2321982, 16304: 2322232}
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | --------------------------------------------------
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | 
[2026-04-11 09:14:22] 2026-04-11 07:13:39,192 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-11 09:14:22] 2026-04-11 07:13:39,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 09:14:22] 2026-04-11 07:13:39,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 09:14:22] 2026-04-11 07:13:39,518 | INFO     | job 7085529049 has completed (purged errors)
[2026-04-11 09:14:22] 2026-04-11 07:13:39,518 | INFO     | overall cleanup function is called
[2026-04-11 09:14:22] 2026-04-11 07:13:40,527 | INFO     | --- collectZombieJob: --- 10, [5979]
[2026-04-11 09:14:22] 2026-04-11 07:13:40,527 | INFO     | zombie collector waiting for pid 5979
[2026-04-11 09:14:22] 2026-04-11 07:13:40,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 09:14:22] 2026-04-11 07:13:40,527 | INFO     | collected zombie processes
[2026-04-11 09:14:22] 2026-04-11 07:13:40,527 | INFO     | will attempt to kill all subprocesses of pid=5979
[2026-04-11 09:14:22] 2026-04-11 07:13:40,649 | INFO     | process IDs to be killed: [5979] (in reverse order)
[2026-04-11 09:14:22] 2026-04-11 07:13:40,879 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 09:14:22] 2026-04-11 07:13:40,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 09:14:22] 2026-04-11 07:13:40,883 | INFO     | did not find any defunct processes belonging to 5979
[2026-04-11 09:14:22] 2026-04-11 07:13:40,886 | INFO     | did not find any defunct processes belonging to 5979
[2026-04-11 09:14:22] 2026-04-11 07:13:40,886 | INFO     | Ready for new job
[2026-04-11 09:14:22] 2026-04-11 07:13:40,888 | INFO     | **************************************
[2026-04-11 09:14:22] 2026-04-11 07:13:40,888 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 09:14:22] 2026-04-11 07:13:40,889 | INFO     | **************************************
[2026-04-11 09:14:22] 2026-04-11 07:13:40,889 | INFO     | 
[2026-04-11 09:14:22] 2026-04-11 07:13:40,889 | INFO     | pilot is running in a VM
[2026-04-11 09:14:22] 2026-04-11 07:13:40,889 | INFO     | architecture information:
[2026-04-11 09:14:22] 2026-04-11 07:13:40,893 | INFO     | executing command: cat /etc/os-release
[2026-04-11 09:14:22] 2026-04-11 07:13:41,017 | INFO     | cat /etc/os-release:
[2026-04-11 09:14:22] NAME="CentOS Linux"
[2026-04-11 09:14:22] VERSION="7 (Core)"
[2026-04-11 09:14:22] ID="centos"
[2026-04-11 09:14:22] ID_LIKE="rhel fedora"
[2026-04-11 09:14:22] VERSION_ID="7"
[2026-04-11 09:14:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 09:14:22] ANSI_COLOR="0;31"
[2026-04-11 09:14:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 09:14:22] HOME_URL="https://www.centos.org/"
[2026-04-11 09:14:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 09:14:22] 
[2026-04-11 09:14:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 09:14:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 09:14:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 09:14:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 09:14:22] 
[2026-04-11 09:14:22] 2026-04-11 07:13:41,017 | INFO     | **************************************
[2026-04-11 09:14:22] 2026-04-11 07:13:41,521 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-11 09:14:22] 2026-04-11 07:13:41,832 | INFO     | sufficient remaining disk space (496603496448 B)
[2026-04-11 09:14:22] 2026-04-11 07:13:41,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 09:14:22] 2026-04-11 07:13:41,833 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 09:14:22] 2026-04-11 07:13:41,833 | INFO     | update_server=False
[2026-04-11 09:14:22] 2026-04-11 07:13:41,833 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 09:14:22] 2026-04-11 07:13:41,880 | INFO     | all job control threads have been joined
[2026-04-11 09:14:22] 2026-04-11 07:13:41,893 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 09:14:22] 2026-04-11 07:13:41,893 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 09:14:22] 2026-04-11 07:13:41,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 09:14:22] 2026-04-11 07:13:41,893 | INFO     | will abort loop
[2026-04-11 09:14:22] 2026-04-11 07:13:42,074 | INFO     | all payload control threads have been joined
[2026-04-11 09:14:22] 2026-04-11 07:13:42,358 | INFO     | all data control threads have been joined
[2026-04-11 09:14:22] 2026-04-11 07:13:42,839 | INFO     | [job] retrieve thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:42,889 | INFO     | [job] control thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:42,899 | INFO     | [job] job monitor thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 09:14:22] 2026-04-11 07:13:43,080 | INFO     | [payload] control thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,118 | INFO     | [payload] validate_post thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,364 | INFO     | [data] control thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,366 | INFO     | [payload] failed_post thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,438 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,466 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,597 | INFO     | [data] copytool_in thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,623 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:43,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 09:14:22] 2026-04-11 07:13:44,071 | INFO     | [job] validate thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:44,299 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:44,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 09:14:22] 2026-04-11 07:13:44,931 | INFO     | [job] queue monitor thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:45,028 | INFO     | [data] copytool_out thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:13:48,747 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 09:14:22] 2026-04-11 07:14:10,564 | INFO     | [monitor] cgroup control has ended
[2026-04-11 09:14:22] 2026-04-11 07:14:11,778 | INFO     | PID=1402 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-11 09:14:22] 2026-04-11 07:14:11,779 | INFO     | .. there are 9 such processes running
[2026-04-11 09:14:22] 2026-04-11 07:14:11,780 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 09:14:22] 2026-04-11 07:14:11,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 09:14:22] 2026-04-11 07:14:11,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 09:14:22] 2026-04-11 07:14:12,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669526685504)>', '<ExcThread(monitor, started 140668928239360)>']
[2026-04-11 09:14:22] 2026-04-11 07:14:12,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 09:14:22] 2026-04-11 07:14:12,788 | INFO     | [monitor] control thread has ended
[2026-04-11 09:14:22] 2026-04-11 07:14:17,655 | INFO     | all workflow threads have been joined
[2026-04-11 09:14:22] 2026-04-11 07:14:17,655 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 09:14:22] 2026-04-11 07:14:17,655 | INFO     | traces error code: 0
[2026-04-11 09:14:22] 2026-04-11 07:14:17,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 09:14:22] 2026-04-11 07:14:17,938 [wrapper] ==== pilot stdout END ====
[2026-04-11 09:14:22] 2026-04-11 07:14:18,048 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 09:14:22] 2026-04-11 07:14:18,125 [wrapper] pilotpid: 1402
[2026-04-11 09:14:22] 2026-04-11 07:14:18,213 [wrapper] Pilot exit status: 0
[2026-04-11 09:14:22] 2026-04-11 07:14:18,679 [wrapper] pandaids: 7085529049
[2026-04-11 09:14:22] 2026-04-11 07:14:19,697 [wrapper] cleanup supervisor_pilot 14498 1403
[2026-04-11 09:14:22] 2026-04-11 07:14:19,784 [wrapper] Test setup, not cleaning
[2026-04-11 09:14:22] 2026-04-11 07:14:19,872 [wrapper] apfmon messages muted
[2026-04-11 09:14:22] 2026-04-11 07:14:19,914 [wrapper] ==== wrapper stdout END ====
[2026-04-11 09:14:22] 2026-04-11 07:14:19,982 [wrapper] ==== wrapper stderr END ====
[2026-04-11 09:14:22]  *** Error codes and diagnostics ***
[2026-04-11 09:14:22]     "exeErrorCode": 0,
[2026-04-11 09:14:22]     "pilotErrorCode": 0,
[2026-04-11 09:14:22]  *** Listing of results directory ***
[2026-04-11 09:14:22] total 420412
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc    644190 Apr 10 17:52 pilot3.tar.gz
[2026-04-11 09:14:22] -rwx------. 1 boinc boinc     36322 Apr 10 17:53 runpilot2-wrapper.sh
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc      5094 Apr 10 17:53 queuedata.json
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc       100 Apr 11 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 09:14:22] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 04:36 run_atlas
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc       105 Apr 11 04:36 job.xml
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc      6307 Apr 11 04:36 init_data.xml
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc 225776924 Apr 11 04:36 EVNT.49263198._000786.pool.root.1
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc     15665 Apr 11 04:36 start_atlas.sh
[2026-04-11 09:14:22] drwxrwx--x. 2 boinc boinc        68 Apr 11 04:36 shared
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc    656935 Apr 11 04:36 input.tar.gz
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc         0 Apr 11 04:36 boinc_lockfile
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc      2574 Apr 11 04:36 pandaJob.out
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc       415 Apr 11 04:41 workernode_map.json
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc    997860 Apr 11 04:41 agis_schedconf.cvmfs.json
[2026-04-11 09:14:22] drwx------. 5 boinc boinc      4096 Apr 11 04:41 pilot3
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc 196922659 Apr 11 09:12 HITS.49263200._037031.pool.root.1
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc       489 Apr 11 09:12 boinc_task_state.xml
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc      1011 Apr 11 09:13 memory_monitor_summary.json
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc   1511579 Apr 11 09:13 agis_ddmendpoints.agis.ALL.json
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc    396929 Apr 11 09:13 log.49263200._037031.job.log.tgz.1
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc      6335 Apr 11 09:13 heartbeat_new.json
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc      6226 Apr 11 09:13 heartbeat.json
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc      8192 Apr 11 09:14 boinc_mmap_file
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc        28 Apr 11 09:14 wrapper_checkpoint.txt
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc        95 Apr 11 09:14 pilot_heartbeat.json
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc      5064 Apr 11 09:14 pilotlog.txt
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc   1479302 Apr 11 09:14 log.49263200._037031.job.log.1
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc       357 Apr 11 09:14 output.list
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc       410 Apr 11 09:14 runtime_log
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc   1894400 Apr 11 09:14 result.tar.gz
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc      8438 Apr 11 09:14 runtime_log.err
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc       655 Apr 11 09:14 1cf8c5cc0ef9.diag
[2026-04-11 09:14:22] -rw-r--r--. 1 boinc boinc     20605 Apr 11 09:14 stderr.txt
[2026-04-11 09:14:22] HITS file was successfully produced:
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc 196922659 Apr 11 09:12 shared/HITS.pool.root.1
[2026-04-11 09:14:22]  *** Contents of shared directory: ***
[2026-04-11 09:14:22] total 415308
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc 225776924 Apr 11 04:36 ATLAS.root_0
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc     15665 Apr 11 04:36 start_atlas.sh
[2026-04-11 09:14:22] -rw-r--r--. 2 boinc boinc    656935 Apr 11 04:36 input.tar.gz
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc 196922659 Apr 11 09:12 HITS.pool.root.1
[2026-04-11 09:14:22] -rw-------. 1 boinc boinc   1894400 Apr 11 09:14 result.tar.gz
09:14:24 (29695): run_atlas exited; CPU time 61848.498188
09:14:24 (29695): called boinc_finish(0)

</stderr_txt>
]]>

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