Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:15:00 (3912194): wrapper (7.7.26015): starting
06:15:00 (3912194): wrapper: running run_atlas (--nthreads 2)
[2026-04-11 06:15:00] Arguments: --nthreads 2
[2026-04-11 06:15:00] Threads: 2
[2026-04-11 06:15:00] Checking for CVMFS
[2026-04-11 06:15:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-11 06:15:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-11 06:15:01] Running cvmfs_config stat atlas.cern.ch
[2026-04-11 06:15:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-11 06:15:01] 2.9.2.0 3735197 1704 54884 158332 3 9 19867906 36864001 0 130560 0 724145 99.983 69703 18935 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-11 06:15:01] CVMFS is ok
[2026-04-11 06:15:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 06:15:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 06:15:01] Further information can be found at the LHC@home message board.
[2026-04-11 06:15:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 06:15:01] Checking for apptainer binary...
[2026-04-11 06:15:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-11 06:15:01] Running /usr/bin/apptainer --version
[2026-04-11 06:15:01] apptainer version 1.4.1-1.1
[2026-04-11 06:15:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 06:15:01] magicA244
[2026-04-11 06:15:01] apptainer works
[2026-04-11 06:15:01] Set ATHENA_PROC_NUMBER=2
[2026-04-11 06:15:01] Set ATHENA_CORE_NUMBER=2
[2026-04-11 06:15:01] Starting ATLAS job with PandaID=7085540581
[2026-04-11 06:15:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 08:28:27]  *** The last 200 lines of the pilot log: ***
[2026-04-11 08:28:27] 2026-04-11 06:27:52,406 | INFO     | did not find any defunct processes belonging to 3920650
[2026-04-11 08:28:27] 2026-04-11 06:27:52,406 | INFO     | Ready for new job
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | **************************************
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | **************************************
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | 
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | architecture information:
[2026-04-11 08:28:27] 2026-04-11 06:27:52,407 | INFO     | executing command: cat /etc/os-release
[2026-04-11 08:28:27] 2026-04-11 06:27:52,417 | INFO     | cat /etc/os-release:
[2026-04-11 08:28:27] NAME="CentOS Linux"
[2026-04-11 08:28:27] VERSION="7 (Core)"
[2026-04-11 08:28:27] ID="centos"
[2026-04-11 08:28:27] ID_LIKE="rhel fedora"
[2026-04-11 08:28:27] VERSION_ID="7"
[2026-04-11 08:28:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 08:28:27] ANSI_COLOR="0;31"
[2026-04-11 08:28:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 08:28:27] HOME_URL="https://www.centos.org/"
[2026-04-11 08:28:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 08:28:27] 
[2026-04-11 08:28:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 08:28:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 08:28:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 08:28:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 08:28:27] 
[2026-04-11 08:28:27] 2026-04-11 06:27:52,417 | INFO     | **************************************
[2026-04-11 08:28:27] 2026-04-11 06:27:52,920 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | INFO     | sufficient remaining disk space (504323112960 B)
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | INFO     | update_server=False
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 08:28:27] 2026-04-11 06:27:52,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 08:28:27] 2026-04-11 06:27:53,040 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 08:28:27] 2026-04-11 06:27:53,040 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 08:28:27] 2026-04-11 06:27:53,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 08:28:27] 2026-04-11 06:27:53,040 | INFO     | will abort loop
[2026-04-11 08:28:27] 2026-04-11 06:27:53,285 | INFO     | all job control threads have been joined
[2026-04-11 08:28:27] 2026-04-11 06:27:53,751 | INFO     | all data control threads have been joined
[2026-04-11 08:28:27] 2026-04-11 06:27:53,935 | INFO     | [job] retrieve thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:53,935 | INFO     | [job] queue monitor thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:53,975 | INFO     | [payload] validate_post thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,007 | INFO     | [job] validate thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,022 | INFO     | [data] copytool_in thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,023 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,045 | INFO     | [job] job monitor thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,072 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,290 | INFO     | [job] control thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,343 | INFO     | all payload control threads have been joined
[2026-04-11 08:28:27] 2026-04-11 06:27:54,555 | INFO     | [payload] failed_post thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,756 | INFO     | [data] control thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:54,935 | INFO     | [data] copytool_out thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:55,149 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:55,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 08:28:27] 2026-04-11 06:27:55,348 | INFO     | [payload] control thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:27:59,280 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:28:03,196 | INFO     | job.realtimelogging is not enabled
[2026-04-11 08:28:27] 2026-04-11 06:28:04,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 08:28:27] 2026-04-11 06:28:21,399 | INFO     | [monitor] cgroup control has ended
[2026-04-11 08:28:27] 2026-04-11 06:28:22,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035664701248)>', '<ExcThread(monitor, started 140034715936512)>']
[2026-04-11 08:28:27] 2026-04-11 06:28:22,743 | INFO     | PID=3916225 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-11 08:28:27] 2026-04-11 06:28:22,744 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 08:28:27] 2026-04-11 06:28:22,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 08:28:27] 2026-04-11 06:28:22,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 08:28:27] 2026-04-11 06:28:22,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 08:28:27] 2026-04-11 06:28:22,744 | INFO     | [monitor] control thread has ended
[2026-04-11 08:28:27] 2026-04-11 06:28:27,402 | INFO     | all workflow threads have been joined
[2026-04-11 08:28:27] 2026-04-11 06:28:27,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 08:28:27] 2026-04-11 06:28:27,402 | INFO     | traces error code: 0
[2026-04-11 08:28:27] 2026-04-11 06:28:27,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 08:28:27] 2026-04-11 06:28:27,446 [wrapper] ==== pilot stdout END ====
[2026-04-11 08:28:27] 2026-04-11 06:28:27,449 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 08:28:27] 2026-04-11 06:28:27,451 [wrapper] pilotpid: 3916225
[2026-04-11 08:28:27] 2026-04-11 06:28:27,454 [wrapper] Pilot exit status: 0
[2026-04-11 08:28:27] 2026-04-11 06:28:27,461 [wrapper] pandaids: 7085540581
[2026-04-11 08:28:27] 2026-04-11 06:28:27,475 [wrapper] cleanup supervisor_pilot 3925880 3916226
[2026-04-11 08:28:27] 2026-04-11 06:28:27,478 [wrapper] Test setup, not cleaning
[2026-04-11 08:28:27] 2026-04-11 06:28:27,480 [wrapper] apfmon messages muted
[2026-04-11 08:28:27] 2026-04-11 06:28:27,483 [wrapper] ==== wrapper stdout END ====
[2026-04-11 08:28:27] 2026-04-11 06:28:27,485 [wrapper] ==== wrapper stderr END ====
[2026-04-11 08:28:27]  *** Error codes and diagnostics ***
[2026-04-11 08:28:27]     "exeErrorCode": 0,
[2026-04-11 08:28:27]     "pilotErrorCode": 0,
[2026-04-11 08:28:27]  *** Listing of results directory ***
[2026-04-11 08:28:27] total 415808
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc    644190 Apr 10 18:50 pilot3.tar.gz
[2026-04-11 08:28:27] -rwx------ 1 boinc boinc     36322 Apr 10 18:53 runpilot2-wrapper.sh
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      5094 Apr 10 18:57 queuedata.json
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc       100 Apr 11 06:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 08:28:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 06:15 run_atlas
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc       105 Apr 11 06:15 job.xml
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc 223931869 Apr 11 06:15 EVNT.49263206._000693.pool.root.1
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc    656934 Apr 11 06:15 input.tar.gz
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc     15665 Apr 11 06:15 start_atlas.sh
[2026-04-11 08:28:27] drwxrwx--x 2 boinc boinc      4096 Apr 11 06:15 shared
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc         0 Apr 11 06:15 boinc_setup_complete
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      6124 Apr 11 06:15 init_data.xml
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc         0 Apr 11 06:15 boinc_lockfile
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      2575 Apr 11 06:15 pandaJob.out
[2026-04-11 08:28:27] -rw------- 1 boinc boinc    997836 Apr 11 06:15 agis_schedconf.cvmfs.json
[2026-04-11 08:28:27] -rw------- 1 boinc boinc   1511579 Apr 11 06:15 agis_ddmendpoints.agis.ALL.json
[2026-04-11 08:28:27] -rw------- 1 boinc boinc       422 Apr 11 06:15 workernode_map.json
[2026-04-11 08:28:27] drwx------ 5 boinc boinc      4096 Apr 11 06:15 pilot3
[2026-04-11 08:28:27] -rw------- 1 boinc boinc 195820471 Apr 11 08:27 HITS.49263208._029654.pool.root.1
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc       487 Apr 11 08:27 boinc_task_state.xml
[2026-04-11 08:28:27] -rw------- 1 boinc boinc        95 Apr 11 08:27 pilot_heartbeat.json
[2026-04-11 08:28:27] -rw------- 1 boinc boinc      1013 Apr 11 08:27 memory_monitor_summary.json
[2026-04-11 08:28:27] -rw------- 1 boinc boinc    244342 Apr 11 08:27 log.49263208._029654.job.log.tgz.1
[2026-04-11 08:28:27] -rw------- 1 boinc boinc      6325 Apr 11 08:27 heartbeat_new.json
[2026-04-11 08:28:27] -rw------- 1 boinc boinc      6216 Apr 11 08:27 heartbeat.json
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      8192 Apr 11 08:28 boinc_mmap_file
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc        27 Apr 11 08:28 wrapper_checkpoint.txt
[2026-04-11 08:28:27] -rw------- 1 boinc boinc      5005 Apr 11 08:28 pilotlog.txt
[2026-04-11 08:28:27] -rw------- 1 boinc boinc    754102 Apr 11 08:28 log.49263208._029654.job.log.1
[2026-04-11 08:28:27] -rw------- 1 boinc boinc       357 Apr 11 08:28 output.list
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc       410 Apr 11 08:28 runtime_log
[2026-04-11 08:28:27] -rw------- 1 boinc boinc   1013760 Apr 11 08:28 result.tar.gz
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      8533 Apr 11 08:28 runtime_log.err
[2026-04-11 08:28:27] -rw------- 1 boinc boinc       662 Apr 11 08:28 2b08ca2d8799.diag
[2026-04-11 08:28:27] -rw-r--r-- 1 boinc boinc      9745 Apr 11 08:28 stderr.txt
[2026-04-11 08:28:27] HITS file was successfully produced:
[2026-04-11 08:28:27] -rw------- 1 boinc boinc 195820471 Apr 11 08:27 shared/HITS.pool.root.1
[2026-04-11 08:28:27]  *** Contents of shared directory: ***
[2026-04-11 08:28:27] total 411568
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc 223931869 Apr 11 06:15 ATLAS.root_0
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc    656934 Apr 11 06:15 input.tar.gz
[2026-04-11 08:28:27] -rw-r--r-- 2 boinc boinc     15665 Apr 11 06:15 start_atlas.sh
[2026-04-11 08:28:27] -rw------- 1 boinc boinc 195820471 Apr 11 08:27 HITS.pool.root.1
[2026-04-11 08:28:27] -rw------- 1 boinc boinc   1013760 Apr 11 08:28 result.tar.gz
08:28:29 (3912194): run_atlas exited; CPU time 15267.473525
08:28:29 (3912194): called boinc_finish(0)

</stderr_txt>
]]>

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