Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:57:40 (307134): wrapper (7.7.26015): starting
13:57:40 (307134): wrapper: running run_atlas (--nthreads 12)
[2026-04-11 13:57:40] Arguments: --nthreads 12
[2026-04-11 13:57:40] Threads: 12
[2026-04-11 13:57:40] Checking for CVMFS
[2026-04-11 13:57:40] No cvmfs_config command found, will try listing directly
[2026-04-11 13:57:40] CVMFS is ok
[2026-04-11 13:57:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 13:57:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 13:57:40] Further information can be found at the LHC@home message board.
[2026-04-11 13:57:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 13:57:40] Checking for apptainer binary...
[2026-04-11 13:57:40] which: no apptainer in ((null))
[2026-04-11 13:57:40] apptainer is not installed, using version from CVMFS
[2026-04-11 13:57:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 13:57:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-04-11 13:57:40] apptainer works
[2026-04-11 13:57:40] Set ATHENA_PROC_NUMBER=12
[2026-04-11 13:57:40] Set ATHENA_CORE_NUMBER=12
[2026-04-11 13:57:40] Starting ATLAS job with PandaID=7085529231
[2026-04-11 13:57:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 14:27:59]  *** The last 200 lines of the pilot log: ***
[2026-04-11 14:27:59]  filetype=log
[2026-04-11 14:27:59]  guid=bc54e0ce-38f5-4d17-9bf4-483db20e8aca
[2026-04-11 14:27:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-11 14:27:59]  is_altstaged=None
[2026-04-11 14:27:59]  is_tar=False
[2026-04-11 14:27:59]  lfn=log.49263200._037213.job.log.tgz.1
[2026-04-11 14:27:59]  mtime=0
[2026-04-11 14:27:59]  protocol_id=None
[2026-04-11 14:27:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-11 14:27:59]  replicas=None
[2026-04-11 14:27:59]  scope=mc23_13p6TeV
[2026-04-11 14:27:59]  status=None
[2026-04-11 14:27:59]  status_code=0
[2026-04-11 14:27:59]  storage_token=
[2026-04-11 14:27:59]  surl=/var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7085529231/log.49263200._037213.job.log.tgz.1
[2026-04-11 14:27:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/88/log.49263200._037213.job.log.tgz.1
[2026-04-11 14:27:59]  workdir=None
[2026-04-11 14:27:59] ]
[2026-04-11 14:27:59] 2026-04-11 12:27:16,358 | INFO     | transferring file log.49263200._037213.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7085529231/log.49263200._037213.job.log.tgz.1 to /var/lib/
[2026-04-11 14:27:59] 2026-04-11 12:27:16,358 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7085529231/log.49263200._037213.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/1/
[2026-04-11 14:27:59] 2026-04-11 12:27:16,372 | INFO     | adding to output.list: log.49263200._037213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/88/log.49263200._037213.job.log.tg
[2026-04-11 14:27:59] 2026-04-11 12:27:16,373 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-11 14:27:59] 2026-04-11 12:27:16,373 | INFO     | summary of transferred files:
[2026-04-11 14:27:59] 2026-04-11 12:27:16,373 | INFO     |  -- lfn=log.49263200._037213.job.log.tgz.1, status_code=0, status=transferred
[2026-04-11 14:27:59] 2026-04-11 12:27:16,373 | INFO     | stage-out finished correctly
[2026-04-11 14:27:59] 2026-04-11 12:27:17,692 | INFO     | monitor loop #136: job 0:7085529231 is in state 'finished'
[2026-04-11 14:27:59] 2026-04-11 12:27:17,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 14:27:59] 2026-04-11 12:27:19,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 14:27:59] 2026-04-11 12:27:20,195 | INFO     | monitor loop #137: job 0:7085529231 is in state 'finished'
[2026-04-11 14:27:59] 2026-04-11 12:27:20,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,839 | INFO     | job 7085529231 has state=finished
[2026-04-11 14:27:59] 2026-04-11 12:27:20,839 | INFO     | preparing for final server update for job 7085529231 in state='finished'
[2026-04-11 14:27:59] 2026-04-11 12:27:20,840 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7085529231/jobReport.json
[2026-04-11 14:27:59] 2026-04-11 12:27:20,841 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/1/workernode_map.json
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | INFO     | this job has now completed (state=finished)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | INFO     | log transfer has been attempted: DONE
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | INFO     | job 7085529231 has finished - writing final server update
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1133735/.job.ad'
[2026-04-11 14:27:59] 2026-04-11 12:27:20,842 | INFO     | total number of processed events: 400 (read)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,860 | INFO     | using path: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7085529231/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,861 | INFO     | extracted standard info from prmon json
[2026-04-11 14:27:59] 2026-04-11 12:27:20,861 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 14:27:59] 2026-04-11 12:27:20,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 14:27:59] 2026-04-11 12:27:20,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | fitting pss+swap vs Time
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | sum of square deviations: 3294945.5
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | sum of deviations: -34471588.00000001
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | mean x (centered): 0.0
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | mean y: 2695644.727272727
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | intersect: 2695644.727272727
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | chi2: 0.00012608159622404827
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | current memory leak: -10.46 B/s (using 22 data points, chi2=0.00)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,862 | INFO     | could have reported an average CPU frequency of 3649 MHz (4 samples)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | ..............................
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . Timing measurements:
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . get job = 0 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . initial setup = 4 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . payload setup = 6 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . stage-in = 0 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . payload execution = 1743 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . stage-out = 0 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | . log creation = 0 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,863 | INFO     | ..............................
[2026-04-11 14:27:59] 2026-04-11 12:27:20,911 | INFO     | 
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | job summary report
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | --------------------------------------------------
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | PanDA job id: 7085529231
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | task id: 49263200
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | errors: (none)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | pilot state: finished 
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | transexitcode: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | exeerrorcode: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | exeerrordiag: 
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | exitcode: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | exitmsg: OK
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | cpuconsumptiontime: 18690 s
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | nevents: 400
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | neventsw: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | pid: 329452
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | pgrp: 329452
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | corecount: 12
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | event service: False
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | sizes: {0: 2281480, 10: 2281480, 1753: 2306348, 1754: 2315425, 1757: 2315425, 1759: 2315619}
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | --------------------------------------------------
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | 
[2026-04-11 14:27:59] 2026-04-11 12:27:20,912 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/1
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | job 7085529231 has completed (purged errors)
[2026-04-11 14:27:59] 2026-04-11 12:27:20,933 | INFO     | overall cleanup function is called
[2026-04-11 14:27:59] 2026-04-11 12:27:21,940 | INFO     | --- collectZombieJob: --- 10, [329452]
[2026-04-11 14:27:59] 2026-04-11 12:27:21,940 | INFO     | zombie collector waiting for pid 329452
[2026-04-11 14:27:59] 2026-04-11 12:27:21,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 14:27:59] 2026-04-11 12:27:21,941 | INFO     | collected zombie processes
[2026-04-11 14:27:59] 2026-04-11 12:27:21,941 | INFO     | will attempt to kill all subprocesses of pid=329452
[2026-04-11 14:27:59] 2026-04-11 12:27:22,246 | INFO     | process IDs to be killed: [329452] (in reverse order)
[2026-04-11 14:27:59] 2026-04-11 12:27:22,384 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 14:27:59] 2026-04-11 12:27:22,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 14:27:59] 2026-04-11 12:27:22,407 | INFO     | did not find any defunct processes belonging to 329452
[2026-04-11 14:27:59] 2026-04-11 12:27:22,430 | INFO     | did not find any defunct processes belonging to 329452
[2026-04-11 14:27:59] 2026-04-11 12:27:22,430 | INFO     | Ready for new job
[2026-04-11 14:27:59] 2026-04-11 12:27:22,431 | INFO     | **************************************
[2026-04-11 14:27:59] 2026-04-11 12:27:22,431 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 14:27:59] 2026-04-11 12:27:22,431 | INFO     | **************************************
[2026-04-11 14:27:59] 2026-04-11 12:27:22,431 | INFO     | 
[2026-04-11 14:27:59] 2026-04-11 12:27:22,437 | INFO     | architecture information:
[2026-04-11 14:27:59] 2026-04-11 12:27:22,438 | INFO     | executing command: cat /etc/os-release
[2026-04-11 14:27:59] 2026-04-11 12:27:22,450 | INFO     | cat /etc/os-release:
[2026-04-11 14:27:59] NAME="CentOS Linux"
[2026-04-11 14:27:59] VERSION="7 (Core)"
[2026-04-11 14:27:59] ID="centos"
[2026-04-11 14:27:59] ID_LIKE="rhel fedora"
[2026-04-11 14:27:59] VERSION_ID="7"
[2026-04-11 14:27:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 14:27:59] ANSI_COLOR="0;31"
[2026-04-11 14:27:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 14:27:59] HOME_URL="https://www.centos.org/"
[2026-04-11 14:27:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 14:27:59] 
[2026-04-11 14:27:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 14:27:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 14:27:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 14:27:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 14:27:59] 
[2026-04-11 14:27:59] 2026-04-11 12:27:22,451 | INFO     | **************************************
[2026-04-11 14:27:59] 2026-04-11 12:27:22,953 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/1
[2026-04-11 14:27:59] 2026-04-11 12:27:22,971 | INFO     | sufficient remaining disk space (189165207552 B)
[2026-04-11 14:27:59] 2026-04-11 12:27:22,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 14:27:59] 2026-04-11 12:27:22,971 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 14:27:59] 2026-04-11 12:27:22,971 | INFO     | update_server=False
[2026-04-11 14:27:59] 2026-04-11 12:27:22,971 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 14:27:59] 2026-04-11 12:27:23,239 | INFO     | all job control threads have been joined
[2026-04-11 14:27:59] 2026-04-11 12:27:23,480 | INFO     | all data control threads have been joined
[2026-04-11 14:27:59] 2026-04-11 12:27:23,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 14:27:59] 2026-04-11 12:27:23,703 | INFO     | aborting loop
[2026-04-11 14:27:59] 2026-04-11 12:27:23,861 | INFO     | all payload control threads have been joined
[2026-04-11 14:27:59] 2026-04-11 12:27:23,976 | INFO     | [job] retrieve thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,069 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,245 | INFO     | [job] control thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,289 | INFO     | [payload] failed_post thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 14:27:59] 2026-04-11 12:27:24,485 | INFO     | [data] control thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,708 | INFO     | [job] job monitor thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,867 | INFO     | [payload] control thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,912 | INFO     | [payload] validate_post thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,937 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:24,999 | INFO     | [job] validate thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:25,003 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:25,214 | INFO     | [data] copytool_in thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:25,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 14:27:59] 2026-04-11 12:27:25,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 14:27:59] 2026-04-11 12:27:26,436 | INFO     | [data] copytool_out thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:26,924 | INFO     | [job] queue monitor thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:29,489 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:33,344 | INFO     | job.realtimelogging is not enabled
[2026-04-11 14:27:59] 2026-04-11 12:27:34,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 14:27:59] 2026-04-11 12:27:46,546 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-04-11 14:27:59] 2026-04-11 12:27:53,832 | INFO     | PID=315234 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 14:27:59] 2026-04-11 12:27:53,833 | INFO     | .. there are 15 such processes running
[2026-04-11 14:27:59] 2026-04-11 12:27:53,833 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 14:27:59] 2026-04-11 12:27:53,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 14:27:59] 2026-04-11 12:27:53,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 14:27:59] 2026-04-11 12:27:54,162 | INFO     | [monitor] cgroup control has ended
[2026-04-11 14:27:59] 2026-04-11 12:27:54,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22416538691392)>', '<ExcThread(monitor, started 22416233318144)>']
[2026-04-11 14:27:59] 2026-04-11 12:27:54,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 14:27:59] 2026-04-11 12:27:54,838 | INFO     | [monitor] control thread has ended
[2026-04-11 14:27:59] 2026-04-11 12:27:59,446 | INFO     | all workflow threads have been joined
[2026-04-11 14:27:59] 2026-04-11 12:27:59,446 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 14:27:59] 2026-04-11 12:27:59,446 | INFO     | traces error code: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:59,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 14:27:59] 2026-04-11 12:27:59,580 [wrapper] ==== pilot stdout END ====
[2026-04-11 14:27:59] 2026-04-11 12:27:59,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 14:27:59] 2026-04-11 12:27:59,584 [wrapper] pilotpid: 315234
[2026-04-11 14:27:59] 2026-04-11 12:27:59,585 [wrapper] Pilot exit status: 0
[2026-04-11 14:27:59] 2026-04-11 12:27:59,590 [wrapper] pandaids: 7085529231
[2026-04-11 14:27:59] 2026-04-11 12:27:59,686 [wrapper] cleanup supervisor_pilot  521663 315236
[2026-04-11 14:27:59] 2026-04-11 12:27:59,688 [wrapper] Test setup, not cleaning
[2026-04-11 14:27:59] 2026-04-11 12:27:59,690 [wrapper] apfmon messages muted
[2026-04-11 14:27:59] 2026-04-11 12:27:59,692 [wrapper] ==== wrapper stdout END ====
[2026-04-11 14:27:59] 2026-04-11 12:27:59,693 [wrapper] ==== wrapper stderr END ====
[2026-04-11 14:27:59]  *** Error codes and diagnostics ***
[2026-04-11 14:27:59]     "exeErrorCode": 0,
[2026-04-11 14:27:59]     "pilotErrorCode": 0,
[2026-04-11 14:27:59]  *** Listing of results directory ***
[2026-04-11 14:27:59] total 418760
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc    644190 Apr 10 17:52 pilot3.tar.gz
[2026-04-11 14:27:59] -rwx------. 1 boinc boinc     36322 Apr 10 17:53 runpilot2-wrapper.sh
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc      5094 Apr 10 17:53 queuedata.json
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc       100 Apr 11 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 14:27:59] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 13:57 run_atlas
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc       105 Apr 11 13:57 job.xml
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc      6628 Apr 11 13:57 init_data.xml
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc 226227464 Apr 11 13:57 EVNT.49263198._000793.pool.root.1
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc     15665 Apr 11 13:57 start_atlas.sh
[2026-04-11 14:27:59] drwxrwx--x. 2 boinc boinc      4096 Apr 11 13:57 shared
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc    656932 Apr 11 13:57 input.tar.gz
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc         0 Apr 11 13:57 boinc_lockfile
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc      2575 Apr 11 13:57 pandaJob.out
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc    997828 Apr 11 13:57 agis_schedconf.cvmfs.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc   1511579 Apr 11 13:57 agis_ddmendpoints.agis.ALL.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc       442 Apr 11 13:57 workernode_map.json
[2026-04-11 14:27:59] drwx------. 5 boinc boinc      4096 Apr 11 13:57 pilot3
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc 197428353 Apr 11 14:26 HITS.49263200._037213.pool.root.1
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc       487 Apr 11 14:26 boinc_task_state.xml
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc      1032 Apr 11 14:27 memory_monitor_summary.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc    331882 Apr 11 14:27 log.49263200._037213.job.log.tgz.1
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc      6382 Apr 11 14:27 heartbeat_new.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc      6273 Apr 11 14:27 heartbeat.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc        95 Apr 11 14:27 pilot_heartbeat.json
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc      4901 Apr 11 14:27 pilotlog.txt
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc        27 Apr 11 14:27 wrapper_checkpoint.txt
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc      8192 Apr 11 14:27 boinc_mmap_file
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc    212228 Apr 11 14:27 log.49263200._037213.job.log.1
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc       357 Apr 11 14:27 output.list
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc       410 Apr 11 14:27 runtime_log
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc    563200 Apr 11 14:27 result.tar.gz
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc      8845 Apr 11 14:27 runtime_log.err
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc       662 Apr 11 14:27 1d015aef21c1.diag
[2026-04-11 14:27:59] -rw-r--r--. 1 boinc boinc     21073 Apr 11 14:27 stderr.txt
[2026-04-11 14:27:59] HITS file was successfully produced:
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc 197428353 Apr 11 14:26 shared/HITS.pool.root.1
[2026-04-11 14:27:59]  *** Contents of shared directory: ***
[2026-04-11 14:27:59] total 414952
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc 226227464 Apr 11 13:57 ATLAS.root_0
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc     15665 Apr 11 13:57 start_atlas.sh
[2026-04-11 14:27:59] -rw-r--r--. 2 boinc boinc    656932 Apr 11 13:57 input.tar.gz
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc 197428353 Apr 11 14:26 HITS.pool.root.1
[2026-04-11 14:27:59] -rw-------. 1 boinc boinc    563200 Apr 11 14:27 result.tar.gz
14:28:01 (307134): run_atlas exited; CPU time 18729.489773
14:28:01 (307134): called boinc_finish(0)

</stderr_txt>
]]>

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