Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:55:42 (3627723): wrapper (7.7.26015): starting
13:55:42 (3627723): wrapper: running run_atlas (--nthreads 12)
[2026-04-11 13:55:43] Arguments: --nthreads 12
[2026-04-11 13:55:43] Threads: 12
[2026-04-11 13:55:43] Checking for CVMFS
[2026-04-11 13:55:43] No cvmfs_config command found, will try listing directly
[2026-04-11 13:55:43] CVMFS is ok
[2026-04-11 13:55:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 13:55:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 13:55:43] Further information can be found at the LHC@home message board.
[2026-04-11 13:55:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 13:55:43] Checking for apptainer binary...
[2026-04-11 13:55:43] which: no apptainer in ((null))
[2026-04-11 13:55:43] apptainer is not installed, using version from CVMFS
[2026-04-11 13:55:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 13:55:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-04-11 13:55:43] apptainer works
[2026-04-11 13:55:43] Set ATHENA_PROC_NUMBER=12
[2026-04-11 13:55:43] Set ATHENA_CORE_NUMBER=12
[2026-04-11 13:55:43] Starting ATLAS job with PandaID=7085007814
[2026-04-11 13:55:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 14:25:01]  *** The last 200 lines of the pilot log: ***
[2026-04-11 14:25:01]  guid=d51243ca-44f9-4818-97f0-bd7e9d21a1a8
[2026-04-11 14:25:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-11 14:25:01]  is_altstaged=None
[2026-04-11 14:25:01]  is_tar=False
[2026-04-11 14:25:01]  lfn=log.49263200._036248.job.log.tgz.1
[2026-04-11 14:25:01]  mtime=0
[2026-04-11 14:25:01]  protocol_id=None
[2026-04-11 14:25:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-11 14:25:01]  replicas=None
[2026-04-11 14:25:01]  scope=mc23_13p6TeV
[2026-04-11 14:25:01]  status=None
[2026-04-11 14:25:01]  status_code=0
[2026-04-11 14:25:01]  storage_token=
[2026-04-11 14:25:01]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/log.49263200._036248.job.log.tgz.1
[2026-04-11 14:25:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/34/log.49263200._036248.job.log.tgz.1
[2026-04-11 14:25:01]  workdir=None
[2026-04-11 14:25:01] ]
[2026-04-11 14:25:01] 2026-04-11 12:24:11,898 | INFO     | transferring file log.49263200._036248.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/log.49263200._036248.job.log.tgz.1 to /var/lib/
[2026-04-11 14:25:01] 2026-04-11 12:24:11,898 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/log.49263200._036248.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-04-11 14:25:01] 2026-04-11 12:24:11,914 | INFO     | adding to output.list: log.49263200._036248.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/34/log.49263200._036248.job.log.tg
[2026-04-11 14:25:01] 2026-04-11 12:24:11,914 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-11 14:25:01] 2026-04-11 12:24:11,914 | INFO     | summary of transferred files:
[2026-04-11 14:25:01] 2026-04-11 12:24:11,914 | INFO     |  -- lfn=log.49263200._036248.job.log.tgz.1, status_code=0, status=transferred
[2026-04-11 14:25:01] 2026-04-11 12:24:11,915 | INFO     | stage-out finished correctly
[2026-04-11 14:25:01] 2026-04-11 12:24:13,224 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-11 14:25:01] 2026-04-11 12:24:13,985 | WARNING  | process 3646518 can no longer be monitored (due to stat problems) - aborting
[2026-04-11 14:25:01] 2026-04-11 12:24:13,986 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,113 | INFO     | job 7085007814 has state=finished
[2026-04-11 14:25:01] 2026-04-11 12:24:14,114 | INFO     | preparing for final server update for job 7085007814 in state='finished'
[2026-04-11 14:25:01] 2026-04-11 12:24:14,114 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/jobReport.json
[2026-04-11 14:25:01] 2026-04-11 12:24:14,115 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | INFO     | this job has now completed (state=finished)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | INFO     | log transfer has been attempted: DONE
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | INFO     | job 7085007814 has finished - writing final server update
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_41573/.job.ad'
[2026-04-11 14:25:01] 2026-04-11 12:24:14,116 | INFO     | total number of processed events: 400 (read)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,137 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7085007814/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,138 | INFO     | extracted standard info from prmon json
[2026-04-11 14:25:01] 2026-04-11 12:24:14,138 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 14:25:01] 2026-04-11 12:24:14,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 14:25:01] 2026-04-11 12:24:14,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | fitting pss+swap vs Time
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | sum of square deviations: 2865170.0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | sum of deviations: -36959656.0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | mean x (centered): 0.0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | mean y: 2695013.3333333335
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | intersect: 2695013.3333333335
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | chi2: 0.00021770097871097016
[2026-04-11 14:25:01] 2026-04-11 12:24:14,139 | INFO     | current memory leak: -12.90 B/s (using 21 data points, chi2=0.00)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | could have reported an average CPU frequency of 3670 MHz (4 samples)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | ..............................
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . Timing measurements:
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . get job = 0 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . initial setup = 4 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . payload setup = 5 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . stage-in = 0 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . payload execution = 1676 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . stage-out = 0 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | . log creation = 0 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,140 | INFO     | ..............................
[2026-04-11 14:25:01] 2026-04-11 12:24:14,355 | INFO     | number of running child processes to parent process 3646518: 1
[2026-04-11 14:25:01] 2026-04-11 12:24:14,355 | INFO     | maximum number of monitored processes: 6
[2026-04-11 14:25:01] 2026-04-11 12:24:14,355 | INFO     | aborting job monitoring since job object (job id=7085007814) has expired
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | 
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | job summary report
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | --------------------------------------------------
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | PanDA job id: 7085007814
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | task id: 49263200
[2026-04-11 14:25:01] 2026-04-11 12:24:14,554 | INFO     | errors: (none)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | pilot state: finished 
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | transexitcode: 0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | exeerrorcode: 0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | exeerrordiag: 
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | exitcode: 0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | exitmsg: OK
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | cpuconsumptiontime: 18003 s
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | nevents: 400
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | neventsw: 0
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | pid: 3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | pgrp: 3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | corecount: 12
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | event service: False
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | sizes: {0: 2279736, 1: 2281508, 11: 2281508, 1686: 2306348, 1688: 2315370, 1689: 2315426, 1690: 2315748}
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | --------------------------------------------------
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | 
[2026-04-11 14:25:01] 2026-04-11 12:24:14,555 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-04-11 14:25:01] 2026-04-11 12:24:14,570 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,570 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,570 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | job 7085007814 has completed (purged errors)
[2026-04-11 14:25:01] 2026-04-11 12:24:14,571 | INFO     | overall cleanup function is called
[2026-04-11 14:25:01] 2026-04-11 12:24:15,577 | INFO     | --- collectZombieJob: --- 10, [3646518]
[2026-04-11 14:25:01] 2026-04-11 12:24:15,578 | INFO     | zombie collector waiting for pid 3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:15,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 14:25:01] 2026-04-11 12:24:15,578 | INFO     | collected zombie processes
[2026-04-11 14:25:01] 2026-04-11 12:24:15,578 | INFO     | will attempt to kill all subprocesses of pid=3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:15,908 | INFO     | process IDs to be killed: [3646518] (in reverse order)
[2026-04-11 14:25:01] 2026-04-11 12:24:16,038 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 14:25:01] 2026-04-11 12:24:16,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 14:25:01] 2026-04-11 12:24:16,061 | INFO     | did not find any defunct processes belonging to 3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:16,083 | INFO     | did not find any defunct processes belonging to 3646518
[2026-04-11 14:25:01] 2026-04-11 12:24:16,083 | INFO     | Ready for new job
[2026-04-11 14:25:01] 2026-04-11 12:24:16,084 | INFO     | **************************************
[2026-04-11 14:25:01] 2026-04-11 12:24:16,084 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 14:25:01] 2026-04-11 12:24:16,084 | INFO     | **************************************
[2026-04-11 14:25:01] 2026-04-11 12:24:16,084 | INFO     | 
[2026-04-11 14:25:01] 2026-04-11 12:24:16,089 | INFO     | architecture information:
[2026-04-11 14:25:01] 2026-04-11 12:24:16,090 | INFO     | executing command: cat /etc/os-release
[2026-04-11 14:25:01] 2026-04-11 12:24:16,102 | INFO     | cat /etc/os-release:
[2026-04-11 14:25:01] NAME="CentOS Linux"
[2026-04-11 14:25:01] VERSION="7 (Core)"
[2026-04-11 14:25:01] ID="centos"
[2026-04-11 14:25:01] ID_LIKE="rhel fedora"
[2026-04-11 14:25:01] VERSION_ID="7"
[2026-04-11 14:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 14:25:01] ANSI_COLOR="0;31"
[2026-04-11 14:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 14:25:01] HOME_URL="https://www.centos.org/"
[2026-04-11 14:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 14:25:01] 
[2026-04-11 14:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 14:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 14:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 14:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 14:25:01] 
[2026-04-11 14:25:01] 2026-04-11 12:24:16,102 | INFO     | **************************************
[2026-04-11 14:25:01] 2026-04-11 12:24:16,605 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-04-11 14:25:01] 2026-04-11 12:24:16,621 | INFO     | sufficient remaining disk space (187858681856 B)
[2026-04-11 14:25:01] 2026-04-11 12:24:16,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 14:25:01] 2026-04-11 12:24:16,622 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 14:25:01] 2026-04-11 12:24:16,622 | INFO     | update_server=False
[2026-04-11 14:25:01] 2026-04-11 12:24:16,622 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 14:25:01] 2026-04-11 12:24:16,857 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 14:25:01] 2026-04-11 12:24:16,858 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 14:25:01] 2026-04-11 12:24:16,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 14:25:01] 2026-04-11 12:24:16,858 | INFO     | will abort loop
[2026-04-11 14:25:01] 2026-04-11 12:24:16,980 | INFO     | all job control threads have been joined
[2026-04-11 14:25:01] 2026-04-11 12:24:17,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 14:25:01] 2026-04-11 12:24:17,551 | INFO     | all data control threads have been joined
[2026-04-11 14:25:01] 2026-04-11 12:24:17,627 | INFO     | [job] retrieve thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:17,863 | INFO     | [job] job monitor thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:17,985 | INFO     | [job] control thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,029 | INFO     | all payload control threads have been joined
[2026-04-11 14:25:01] 2026-04-11 12:24:18,221 | INFO     | [payload] failed_post thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,531 | INFO     | [job] validate thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,556 | INFO     | [data] control thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,614 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,689 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,866 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,866 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:18,953 | INFO     | [data] copytool_in thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:19,034 | INFO     | [payload] control thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:19,160 | INFO     | [payload] validate_post thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:19,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 14:25:01] 2026-04-11 12:24:19,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 14:25:01] 2026-04-11 12:24:19,476 | INFO     | [data] copytool_out thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:20,201 | INFO     | [job] queue monitor thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:23,283 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 14:25:01] 2026-04-11 12:24:47,371 | INFO     | PID=3635173 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-11 14:25:01] 2026-04-11 12:24:47,371 | INFO     | .. there are 14 such processes running
[2026-04-11 14:25:01] 2026-04-11 12:24:47,371 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 14:25:01] 2026-04-11 12:24:47,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 14:25:01] 2026-04-11 12:24:47,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 14:25:01] 2026-04-11 12:24:55,688 | INFO     | [monitor] cgroup control has ended
[2026-04-11 14:25:01] 2026-04-11 12:24:56,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22871570708288)>', '<ExcThread(monitor, started 22871333418752)>']
[2026-04-11 14:25:01] 2026-04-11 12:24:57,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 14:25:01] 2026-04-11 12:24:57,416 | INFO     | [monitor] control thread has ended
[2026-04-11 14:25:01] 2026-04-11 12:25:01,471 | INFO     | all workflow threads have been joined
[2026-04-11 14:25:01] 2026-04-11 12:25:01,471 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 14:25:01] 2026-04-11 12:25:01,471 | INFO     | traces error code: 0
[2026-04-11 14:25:01] 2026-04-11 12:25:01,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 14:25:01] 2026-04-11 12:25:01,571 [wrapper] ==== pilot stdout END ====
[2026-04-11 14:25:01] 2026-04-11 12:25:01,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 14:25:01] 2026-04-11 12:25:01,575 [wrapper] pilotpid: 3635173
[2026-04-11 14:25:01] 2026-04-11 12:25:01,576 [wrapper] Pilot exit status: 0
[2026-04-11 14:25:01] 2026-04-11 12:25:01,582 [wrapper] pandaids: 7085007814
[2026-04-11 14:25:01] 2026-04-11 12:25:01,676 [wrapper] cleanup supervisor_pilot 3780463 3635174
[2026-04-11 14:25:01] 2026-04-11 12:25:01,679 [wrapper] Test setup, not cleaning
[2026-04-11 14:25:01] 2026-04-11 12:25:01,681 [wrapper] apfmon messages muted
[2026-04-11 14:25:01] 2026-04-11 12:25:01,683 [wrapper] ==== wrapper stdout END ====
[2026-04-11 14:25:01] 2026-04-11 12:25:01,684 [wrapper] ==== wrapper stderr END ====
[2026-04-11 14:25:01]  *** Error codes and diagnostics ***
[2026-04-11 14:25:01]     "exeErrorCode": 0,
[2026-04-11 14:25:01]     "pilotErrorCode": 0,
[2026-04-11 14:25:01]  *** Listing of results directory ***
[2026-04-11 14:25:01] total 416304
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc    644190 Apr 10 13:32 pilot3.tar.gz
[2026-04-11 14:25:01] -rwx------. 1 boinc boinc     36322 Apr 10 13:34 runpilot2-wrapper.sh
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc      5094 Apr 10 13:43 queuedata.json
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc       100 Apr 11 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 14:25:01] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 13:55 run_atlas
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc       105 Apr 11 13:55 job.xml
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc     15665 Apr 11 13:55 start_atlas.sh
[2026-04-11 14:25:01] drwxrwx--x. 2 boinc boinc      4096 Apr 11 13:55 shared
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc    656933 Apr 11 13:55 input.tar.gz
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc      6626 Apr 11 13:55 init_data.xml
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc 222710451 Apr 11 13:55 EVNT.49263198._000754.pool.root.1
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc         0 Apr 11 13:55 boinc_lockfile
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc      2575 Apr 11 13:55 pandaJob.out
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc    997828 Apr 11 13:55 agis_schedconf.cvmfs.json
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc   1511579 Apr 11 13:55 agis_ddmendpoints.agis.ALL.json
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc       443 Apr 11 13:55 workernode_map.json
[2026-04-11 14:25:01] drwx------. 5 boinc boinc      4096 Apr 11 13:55 pilot3
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc 198429946 Apr 11 14:23 HITS.49263200._036248.pool.root.1
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc      1029 Apr 11 14:24 memory_monitor_summary.json
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc       487 Apr 11 14:24 boinc_task_state.xml
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc    342703 Apr 11 14:24 log.49263200._036248.job.log.tgz.1
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc      6378 Apr 11 14:24 heartbeat_new.json
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc      6269 Apr 11 14:24 heartbeat.json
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc      8192 Apr 11 14:24 boinc_mmap_file
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc        27 Apr 11 14:24 wrapper_checkpoint.txt
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc        95 Apr 11 14:24 pilot_heartbeat.json
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc      5016 Apr 11 14:25 pilotlog.txt
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc    206015 Apr 11 14:25 log.49263200._036248.job.log.1
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc       357 Apr 11 14:25 output.list
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc       410 Apr 11 14:25 runtime_log
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc    563200 Apr 11 14:25 result.tar.gz
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc      8845 Apr 11 14:25 runtime_log.err
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc       660 Apr 11 14:25 e02dcc606b8e.diag
[2026-04-11 14:25:01] -rw-r--r--. 1 boinc boinc     21240 Apr 11 14:25 stderr.txt
[2026-04-11 14:25:01] HITS file was successfully produced:
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc 198429946 Apr 11 14:23 shared/HITS.pool.root.1
[2026-04-11 14:25:01]  *** Contents of shared directory: ***
[2026-04-11 14:25:01] total 412492
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc     15665 Apr 11 13:55 start_atlas.sh
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc    656933 Apr 11 13:55 input.tar.gz
[2026-04-11 14:25:01] -rw-r--r--. 2 boinc boinc 222710451 Apr 11 13:55 ATLAS.root_0
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc 198429946 Apr 11 14:23 HITS.pool.root.1
[2026-04-11 14:25:01] -rw-------. 1 boinc boinc    563200 Apr 11 14:25 result.tar.gz
14:25:03 (3627723): run_atlas exited; CPU time 18050.891524
14:25:03 (3627723): called boinc_finish(0)

</stderr_txt>
]]>

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