Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:04:13 (23532): wrapper (7.7.26015): starting
22:04:13 (23532): wrapper: running run_atlas (--nthreads 8)
[2026-04-10 22:04:13] Arguments: --nthreads 8
[2026-04-10 22:04:13] Threads: 8
[2026-04-10 22:04:13] Checking for CVMFS
[2026-04-10 22:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 22:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 22:04:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 22:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 22:04:13] 2.11.0.0 5707 3269 58572 158313 0 50 2382776 4096001 0 130560 0 108997 94.054 776762 332 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-10 22:04:13] CVMFS is ok
[2026-04-10 22:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 22:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 22:04:13] Further information can be found at the LHC@home message board.
[2026-04-10 22:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 22:04:13] Checking for apptainer binary...
[2026-04-10 22:04:13] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-10 22:04:13] apptainer is not installed, using version from CVMFS
[2026-04-10 22:04:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 22:04:13] WARNING: Environment variable TMPDIR already has value [/tmp/job_11486630/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node374
[2026-04-10 22:04:13] apptainer works
[2026-04-10 22:04:13] Set ATHENA_PROC_NUMBER=8
[2026-04-10 22:04:13] Set ATHENA_CORE_NUMBER=8
[2026-04-10 22:04:13] Starting ATLAS job with PandaID=7059692548
[2026-04-10 22:04:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11486630/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 22:49:29]  *** The last 200 lines of the pilot log: ***
[2026-04-10 22:49:29]  protocol_id=None
[2026-04-10 22:49:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-10 22:49:29]  replicas=None
[2026-04-10 22:49:29]  scope=mc23_13p6TeV
[2026-04-10 22:49:29]  status=None
[2026-04-10 22:49:29]  status_code=0
[2026-04-10 22:49:29]  storage_token=
[2026-04-10 22:49:29]  surl=/tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/log.48955015._026296.job.log.tgz.1
[2026-04-10 22:49:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/5e/log.48955015._026296.job.log.tgz.1
[2026-04-10 22:49:29]  workdir=None
[2026-04-10 22:49:29] ]
[2026-04-10 22:49:29] 2026-04-10 20:48:37,902 | INFO     | transferring file log.48955015._026296.job.log.tgz.1 from /tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/log.48955015._026296.job.log.tgz.1 to /tmp/j
[2026-04-10 22:49:29] 2026-04-10 20:48:37,902 | INFO     | executing command: /usr/bin/env mv /tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/log.48955015._026296.job.log.tgz.1 /tmp/job_11486630/atlas/pilot/sl
[2026-04-10 22:49:29] 2026-04-10 20:48:37,910 | INFO     | adding to output.list: log.48955015._026296.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/5e/log.48955015._026296.job.log.tg
[2026-04-10 22:49:29] 2026-04-10 20:48:37,910 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-10 22:49:29] 2026-04-10 20:48:37,910 | INFO     | summary of transferred files:
[2026-04-10 22:49:29] 2026-04-10 20:48:37,911 | INFO     |  -- lfn=log.48955015._026296.job.log.tgz.1, status_code=0, status=transferred
[2026-04-10 22:49:29] 2026-04-10 20:48:37,911 | INFO     | stage-out finished correctly
[2026-04-10 22:49:29] 2026-04-10 20:48:37,961 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-10 22:49:29] 2026-04-10 20:48:38,006 | INFO     | job 7059692548 has state=finished
[2026-04-10 22:49:29] 2026-04-10 20:48:38,006 | INFO     | preparing for final server update for job 7059692548 in state='finished'
[2026-04-10 22:49:29] 2026-04-10 20:48:38,007 | INFO     | reading metadata from: /tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/jobReport.json
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | added worker_node to metadata from /tmp/job_11486630/atlas/pilot/slots/0/workernode_map.json
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | this job has now completed (state=finished)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | log transfer has been attempted: DONE
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | job 7059692548 has finished - writing final server update
[2026-04-10 22:49:29] 2026-04-10 20:48:38,008 | INFO     | total number of processed events: 400 (read)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,026 | INFO     | using path: /tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,027 | INFO     | extracted standard info from prmon json
[2026-04-10 22:49:29] 2026-04-10 20:48:38,027 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 22:49:29] 2026-04-10 20:48:38,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 22:49:29] 2026-04-10 20:48:38,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | fitting pss+swap vs Time
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | sum of square deviations: 15695178.0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | sum of deviations: -4149038037.0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | mean x (centered): 0.0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | mean y: 2811898.621621622
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | intersect: 2811898.621621622
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | chi2: 0.06451727761747367
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | current memory leak: -264.35 B/s (using 37 data points, chi2=0.06)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | ..............................
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . Timing measurements:
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . get job = 0 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . initial setup = 2 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . payload setup = 3 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . stage-in = 0 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . payload execution = 2638 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,028 | INFO     | . stage-out = 0 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,029 | INFO     | . log creation = 0 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,029 | INFO     | ..............................
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | 
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | job summary report
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | --------------------------------------------------
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | PanDA job id: 7059692548
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | task id: 48955015
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | errors: (none)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | pilot state: finished 
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | transexitcode: 0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | exeerrorcode: 0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | exeerrordiag: 
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | exitcode: 0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | exitmsg: OK
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | cpuconsumptiontime: 19541 s
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | nevents: 400
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | neventsw: 0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | pid: 1486
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | pgrp: 1486
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | corecount: 8
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | event service: False
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | sizes: {0: 2281580, 11: 2281580, 2645: 2306913, 2646: 2316167}
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | --------------------------------------------------
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | 
[2026-04-10 22:49:29] 2026-04-10 20:48:38,076 | INFO     | executing command: ls -lF /tmp/job_11486630/atlas/pilot/slots/0
[2026-04-10 22:49:29] 2026-04-10 20:48:38,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | job 7059692548 has completed (purged errors)
[2026-04-10 22:49:29] 2026-04-10 20:48:38,086 | INFO     | overall cleanup function is called
[2026-04-10 22:49:29] 2026-04-10 20:48:39,092 | INFO     | --- collectZombieJob: --- 10, [1486]
[2026-04-10 22:49:29] 2026-04-10 20:48:39,092 | INFO     | zombie collector waiting for pid 1486
[2026-04-10 22:49:29] 2026-04-10 20:48:39,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 22:49:29] 2026-04-10 20:48:39,093 | INFO     | collected zombie processes
[2026-04-10 22:49:29] 2026-04-10 20:48:39,093 | INFO     | will attempt to kill all subprocesses of pid=1486
[2026-04-10 22:49:29] 2026-04-10 20:48:39,179 | INFO     | process IDs to be killed: [1486] (in reverse order)
[2026-04-10 22:49:29] 2026-04-10 20:48:39,209 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 22:49:29] 2026-04-10 20:48:39,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 22:49:29] 2026-04-10 20:48:39,212 | INFO     | did not find any defunct processes belonging to 1486
[2026-04-10 22:49:29] 2026-04-10 20:48:39,215 | INFO     | did not find any defunct processes belonging to 1486
[2026-04-10 22:49:29] 2026-04-10 20:48:39,215 | INFO     | Ready for new job
[2026-04-10 22:49:29] 2026-04-10 20:48:39,216 | INFO     | **************************************
[2026-04-10 22:49:29] 2026-04-10 20:48:39,216 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 22:49:29] 2026-04-10 20:48:39,216 | INFO     | **************************************
[2026-04-10 22:49:29] 2026-04-10 20:48:39,216 | INFO     | 
[2026-04-10 22:49:29] 2026-04-10 20:48:39,229 | INFO     | architecture information:
[2026-04-10 22:49:29] 2026-04-10 20:48:39,229 | INFO     | executing command: cat /etc/os-release
[2026-04-10 22:49:29] 2026-04-10 20:48:39,235 | INFO     | cat /etc/os-release:
[2026-04-10 22:49:29] NAME="CentOS Linux"
[2026-04-10 22:49:29] VERSION="7 (Core)"
[2026-04-10 22:49:29] ID="centos"
[2026-04-10 22:49:29] ID_LIKE="rhel fedora"
[2026-04-10 22:49:29] VERSION_ID="7"
[2026-04-10 22:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 22:49:29] ANSI_COLOR="0;31"
[2026-04-10 22:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 22:49:29] HOME_URL="https://www.centos.org/"
[2026-04-10 22:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 22:49:29] 
[2026-04-10 22:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 22:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 22:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 22:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 22:49:29] 
[2026-04-10 22:49:29] 2026-04-10 20:48:39,235 | INFO     | **************************************
[2026-04-10 22:49:29] 2026-04-10 20:48:39,738 | INFO     | executing command: df -mP /tmp/job_11486630/atlas/pilot/slots/0
[2026-04-10 22:49:29] 2026-04-10 20:48:39,744 | INFO     | sufficient remaining disk space (227856613376 B)
[2026-04-10 22:49:29] 2026-04-10 20:48:39,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 22:49:29] 2026-04-10 20:48:39,744 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 22:49:29] 2026-04-10 20:48:39,744 | INFO     | update_server=False
[2026-04-10 22:49:29] 2026-04-10 20:48:39,744 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 22:49:29] 2026-04-10 20:48:39,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 22:49:29] 2026-04-10 20:48:39,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 22:49:29] 2026-04-10 20:48:39,784 | INFO     | all data control threads have been joined
[2026-04-10 22:49:29] 2026-04-10 20:48:39,875 | INFO     | all payload control threads have been joined
[2026-04-10 22:49:29] 2026-04-10 20:48:40,750 | INFO     | [job] retrieve thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:40,750 | INFO     | [job] queue monitor thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:40,764 | INFO     | all job control threads have been joined
[2026-04-10 22:49:29] 2026-04-10 20:48:40,789 | INFO     | [data] control thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:40,880 | INFO     | [payload] control thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:40,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 22:49:29] 2026-04-10 20:48:41,030 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,272 | INFO     | [payload] validate_post thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,500 | INFO     | [job] validate thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,558 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,571 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,614 | INFO     | [payload] failed_post thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,769 | INFO     | [job] control thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:41,877 | INFO     | [data] copytool_in thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:42,971 | INFO     | [data] copytool_out thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:43,063 | WARNING  | process 1486 can no longer be monitored (due to stat problems) - aborting
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | INFO     | using path: /tmp/job_11486630/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | INFO     | using path: /tmp/job_11486630/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | WARNING  | maxPSS not found in memory monitor output
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | INFO     | skipping file size check of payload stdout file (/tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/payload.stdout) since it has not been created yet
[2026-04-10 22:49:29] 2026-04-10 20:48:43,135 | INFO     | executing command: df -mP /tmp/job_11486630/atlas/pilot/slots/0
[2026-04-10 22:49:29] 2026-04-10 20:48:43,142 | INFO     | sufficient remaining disk space (227855564800 B)
[2026-04-10 22:49:29] 2026-04-10 20:48:43,142 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-10 22:49:29] 2026-04-10 20:48:43,142 | INFO     | output file size check: skipping output file /tmp/job_11486630/atlas/pilot/slots/0/PanDA_Pilot-7059692548/HITS.48955015._026296.pool.root.1 since it does not exist
[2026-04-10 22:49:29] 2026-04-10 20:48:43,230 | INFO     | number of running child processes to parent process 1486: 1
[2026-04-10 22:49:29] 2026-04-10 20:48:43,230 | INFO     | maximum number of monitored processes: 6
[2026-04-10 22:49:29] 2026-04-10 20:48:43,230 | INFO     | aborting job monitoring since job object (job id=7059692548) has expired
[2026-04-10 22:49:29] 2026-04-10 20:48:43,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 22:49:29] 2026-04-10 20:48:43,230 | INFO     | will abort loop
[2026-04-10 22:49:29] 2026-04-10 20:48:43,750 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:44,235 | INFO     | [job] job monitor thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:48:50,376 | INFO     | job.realtimelogging is not enabled
[2026-04-10 22:49:29] 2026-04-10 20:48:51,381 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 22:49:29] 2026-04-10 20:49:09,767 | INFO     | PID=28187 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-10 22:49:29] 2026-04-10 20:49:09,768 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 22:49:29] 2026-04-10 20:49:09,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 22:49:29] 2026-04-10 20:49:09,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 22:49:29] 2026-04-10 20:49:18,024 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-04-10 22:49:29] 2026-04-10 20:49:24,647 | INFO     | [monitor] cgroup control has ended
[2026-04-10 22:49:29] 2026-04-10 20:49:24,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-04-10 22:49:29] 2026-04-10 20:49:24,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 22:49:29] 2026-04-10 20:49:24,841 | INFO     | [monitor] control thread has ended
[2026-04-10 22:49:29] 2026-04-10 20:49:29,677 | INFO     | all workflow threads have been joined
[2026-04-10 22:49:29] 2026-04-10 20:49:29,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 22:49:29] 2026-04-10 20:49:29,677 | INFO     | traces error code: 0
[2026-04-10 22:49:29] 2026-04-10 20:49:29,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 22:49:29] 2026-04-10 20:49:29,730 [wrapper] ==== pilot stdout END ====
[2026-04-10 22:49:29] 2026-04-10 20:49:29,731 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 22:49:29] 2026-04-10 20:49:29,732 [wrapper] pilotpid: 28187
[2026-04-10 22:49:29] 2026-04-10 20:49:29,733 [wrapper] Pilot exit status: 0
[2026-04-10 22:49:29] 2026-04-10 20:49:29,738 [wrapper] pandaids: 7059692548
[2026-04-10 22:49:29] 2026-04-10 20:49:29,758 [wrapper] cleanup supervisor_pilot 16659 28188
[2026-04-10 22:49:29] 2026-04-10 20:49:29,759 [wrapper] Test setup, not cleaning
[2026-04-10 22:49:29] 2026-04-10 20:49:29,760 [wrapper] apfmon messages muted
[2026-04-10 22:49:29] 2026-04-10 20:49:29,761 [wrapper] ==== wrapper stdout END ====
[2026-04-10 22:49:29] 2026-04-10 20:49:29,762 [wrapper] ==== wrapper stderr END ====
[2026-04-10 22:49:29]  *** Error codes and diagnostics ***
[2026-04-10 22:49:29]     "exeErrorCode": 0,
[2026-04-10 22:49:29]     "pilotErrorCode": 0,
[2026-04-10 22:49:29]  *** Listing of results directory ***
[2026-04-10 22:49:29] total 624836
[2026-04-10 22:49:29] -rwx------ 1 mf493845 unix-user     36322 Apr  9 23:44 runpilot2-wrapper.sh
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    644190 Apr  9 23:52 pilot3.tar.gz
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      5094 Apr  9 23:53 queuedata.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       100 Apr 10 20:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 22:49:29] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 10 20:10 run_atlas
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       105 Apr 10 20:10 job.xml
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user 445162498 Apr 10 22:04 EVNT.46701403._002283.pool.root.1
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 10 22:04 start_atlas.sh
[2026-04-10 22:49:29] drwxrwx--x 2 mf493845 unix-user       100 Apr 10 22:04 shared
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user    656934 Apr 10 22:04 input.tar.gz
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      6306 Apr 10 22:04 init_data.xml
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user         0 Apr 10 22:04 boinc_setup_complete
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      8192 Apr 10 22:04 boinc_mmap_file
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user         0 Apr 10 22:04 boinc_lockfile
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      2572 Apr 10 22:04 pandaJob.out
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    997868 Apr 10 22:04 agis_schedconf.cvmfs.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user   1511579 Apr 10 22:04 agis_ddmendpoints.agis.ALL.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       415 Apr 10 22:04 workernode_map.json
[2026-04-10 22:49:29] drwx------ 5 mf493845 unix-user       480 Apr 10 22:04 pilot3
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user 189442433 Apr 10 22:48 HITS.48955015._026296.pool.root.1
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      1026 Apr 10 22:48 memory_monitor_summary.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    306963 Apr 10 22:48 log.48955015._026296.job.log.tgz.1
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      6337 Apr 10 22:48 heartbeat_new.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      6227 Apr 10 22:48 heartbeat.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user        95 Apr 10 22:49 pilot_heartbeat.json
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      6382 Apr 10 22:49 pilotlog.txt
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    290902 Apr 10 22:49 log.48955015._026296.job.log.1
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       357 Apr 10 22:49 output.list
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       410 Apr 10 22:49 runtime_log
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    614400 Apr 10 22:49 result.tar.gz
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user      8841 Apr 10 22:49 runtime_log.err
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user       643 Apr 10 22:49 1dca0722a490.diag
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user     22410 Apr 10 22:49 stderr.txt
[2026-04-10 22:49:29] HITS file was successfully produced:
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user 189442433 Apr 10 22:48 shared/HITS.pool.root.1
[2026-04-10 22:49:29]  *** Contents of shared directory: ***
[2026-04-10 22:49:29] total 620996
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user 445162498 Apr 10 22:04 ATLAS.root_0
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user     15665 Apr 10 22:04 start_atlas.sh
[2026-04-10 22:49:29] -rw-r--r-- 2 mf493845 unix-user    656934 Apr 10 22:04 input.tar.gz
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user 189442433 Apr 10 22:48 HITS.pool.root.1
[2026-04-10 22:49:29] -rw------- 1 mf493845 unix-user    614400 Apr 10 22:49 result.tar.gz
22:49:31 (23532): run_atlas exited; CPU time 19573.733441
22:49:31 (23532): called boinc_finish(0)

</stderr_txt>
]]>

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