Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:54:09 (1724516): wrapper (7.7.26015): starting
08:54:09 (1724516): wrapper: running run_atlas (--nthreads 4)
[2026-04-12 08:54:09] Arguments: --nthreads 4
[2026-04-12 08:54:09] Threads: 4
[2026-04-12 08:54:09] Checking for CVMFS
[2026-04-12 08:54:09] No cvmfs_config command found, will try listing directly
[2026-04-12 08:54:09] CVMFS is ok
[2026-04-12 08:54:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 08:54:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 08:54:09] Further information can be found at the LHC@home message board.
[2026-04-12 08:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 08:54:09] Checking for apptainer binary...
[2026-04-12 08:54:09] which: no apptainer in ((null))
[2026-04-12 08:54:09] apptainer is not installed, using version from CVMFS
[2026-04-12 08:54:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 08:54:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-04-12 08:54:09] apptainer works
[2026-04-12 08:54:09] Set ATHENA_PROC_NUMBER=4
[2026-04-12 08:54:09] Set ATHENA_CORE_NUMBER=4
[2026-04-12 08:54:09] Starting ATLAS job with PandaID=7085529048
[2026-04-12 08:54:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 12:02:48]  *** The last 200 lines of the pilot log: ***
[2026-04-12 12:02:48] 2026-04-12 10:01:52,202 | INFO     |  -- lfn=log.49263200._037030.job.log.tgz.1, status_code=0, status=transferred
[2026-04-12 12:02:48] 2026-04-12 10:01:52,203 | INFO     | stage-out finished correctly
[2026-04-12 12:02:48] 2026-04-12 10:01:52,299 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 12:02:48] 2026-04-12 10:01:52,386 | INFO     | job 7085529048 has state=finished
[2026-04-12 12:02:48] 2026-04-12 10:01:52,387 | INFO     | preparing for final server update for job 7085529048 in state='finished'
[2026-04-12 12:02:48] 2026-04-12 10:01:52,388 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7085529048/jobReport.json
[2026-04-12 12:02:48] 2026-04-12 10:01:52,390 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/0/workernode_map.json
[2026-04-12 12:02:48] 2026-04-12 10:01:52,390 | INFO     | this job has now completed (state=finished)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,391 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,391 | INFO     | log transfer has been attempted: DONE
[2026-04-12 12:02:48] 2026-04-12 10:01:52,391 | INFO     | job 7085529048 has finished - writing final server update
[2026-04-12 12:02:48] 2026-04-12 10:01:52,395 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3126276/.job.ad'
[2026-04-12 12:02:48] 2026-04-12 10:01:52,395 | INFO     | total number of processed events: 400 (read)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,407 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7085529048/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,407 | INFO     | extracted standard info from prmon json
[2026-04-12 12:02:48] 2026-04-12 10:01:52,408 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 12:02:48] 2026-04-12 10:01:52,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 12:02:48] 2026-04-12 10:01:52,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 12:02:48] 2026-04-12 10:01:52,411 | INFO     | fitting pss+swap vs Time
[2026-04-12 12:02:48] 2026-04-12 10:01:52,412 | INFO     | sum of square deviations: 1931608310.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,413 | INFO     | sum of deviations: 19975043529.999996
[2026-04-12 12:02:48] 2026-04-12 10:01:52,413 | INFO     | mean x (centered): 0.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,413 | INFO     | mean y: 2307970.847826087
[2026-04-12 12:02:48] 2026-04-12 10:01:52,413 | INFO     | intersect: 2307970.847826087
[2026-04-12 12:02:48] 2026-04-12 10:01:52,414 | INFO     | chi2: 1.3656746572330396
[2026-04-12 12:02:48] 2026-04-12 10:01:52,414 | INFO     | sum of square deviations: 1778377530.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,415 | INFO     | sum of deviations: 19440832980.000004
[2026-04-12 12:02:48] 2026-04-12 10:01:52,415 | INFO     | mean x (centered): 0.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,415 | INFO     | mean y: 2307439.055865922
[2026-04-12 12:02:48] 2026-04-12 10:01:52,415 | INFO     | intersect: 2307439.055865922
[2026-04-12 12:02:48] 2026-04-12 10:01:52,416 | INFO     | chi2: 1.3666571903111724
[2026-04-12 12:02:48] 2026-04-12 10:01:52,416 | INFO     | current chi2=1.3666571903111724 (change=-0.07194488620909699 %)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,416 | INFO     | right removable region: 178
[2026-04-12 12:02:48] 2026-04-12 10:01:52,416 | INFO     | sum of square deviations: 1778377530.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,417 | INFO     | sum of deviations: -4040583452.9999986
[2026-04-12 12:02:48] 2026-04-12 10:01:52,417 | INFO     | mean x (centered): 0.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,417 | INFO     | mean y: 2331546.675977654
[2026-04-12 12:02:48] 2026-04-12 10:01:52,417 | INFO     | intersect: 2331546.675977654
[2026-04-12 12:02:48] 2026-04-12 10:01:52,418 | INFO     | chi2: 0.01289480741635882
[2026-04-12 12:02:48] 2026-04-12 10:01:52,418 | INFO     | current chi2=0.01289480741635882 (change=99.05579214287503 %)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,418 | INFO     | sum of square deviations: 1633472487.5
[2026-04-12 12:02:48] 2026-04-12 10:01:52,419 | INFO     | sum of deviations: -2793769042.5
[2026-04-12 12:02:48] 2026-04-12 10:01:52,419 | INFO     | mean x (centered): 0.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,419 | INFO     | mean y: 2330232.293103448
[2026-04-12 12:02:48] 2026-04-12 10:01:52,419 | INFO     | intersect: 2330232.293103448
[2026-04-12 12:02:48] 2026-04-12 10:01:52,420 | INFO     | chi2: 0.011731315008900492
[2026-04-12 12:02:48] 2026-04-12 10:01:52,420 | INFO     | current chi2=0.011731315008900492 (change=9.02295295998201 %)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,420 | INFO     | left removable region: 10
[2026-04-12 12:02:48] 2026-04-12 10:01:52,420 | INFO     | sum of square deviations: 1470248962.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,421 | INFO     | sum of deviations: -2691112325.499999
[2026-04-12 12:02:48] 2026-04-12 10:01:52,421 | INFO     | mean x (centered): 0.0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,421 | INFO     | mean y: 2330347.4345238097
[2026-04-12 12:02:48] 2026-04-12 10:01:52,421 | INFO     | intersect: 2330347.4345238097
[2026-04-12 12:02:48] 2026-04-12 10:01:52,422 | INFO     | chi2: 0.011689500170547418
[2026-04-12 12:02:48] 2026-04-12 10:01:52,422 | INFO     | current memory leak: -1.83 B/s (using 168 data points, chi2=0.01)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,422 | INFO     | could have reported an average CPU frequency of 2615 MHz (10 samples)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,422 | INFO     | ..............................
[2026-04-12 12:02:48] 2026-04-12 10:01:52,422 | INFO     | . Timing measurements:
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . get job = 0 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . initial setup = 6 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . payload setup = 10 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . stage-in = 0 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . payload execution = 11221 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . stage-out = 1 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | . log creation = 0 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,423 | INFO     | ..............................
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | 
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | job summary report
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | --------------------------------------------------
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | PanDA job id: 7085529048
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | task id: 49263200
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | errors: (none)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | pilot state: finished 
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | transexitcode: 0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | exeerrorcode: 0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | exeerrordiag: 
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | exitcode: 0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | exitmsg: OK
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | cpuconsumptiontime: 43442 s
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | nevents: 400
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | neventsw: 0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | pid: 1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | pgrp: 1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | corecount: 4
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | event service: False
[2026-04-12 12:02:48] 2026-04-12 10:01:52,796 | INFO     | sizes: {0: 2279672, 1: 2281501, 11: 2281501, 11235: 2310692, 11237: 2319906}
[2026-04-12 12:02:48] 2026-04-12 10:01:52,797 | INFO     | --------------------------------------------------
[2026-04-12 12:02:48] 2026-04-12 10:01:52,797 | INFO     | 
[2026-04-12 12:02:48] 2026-04-12 10:01:52,797 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-12 12:02:48] 2026-04-12 10:01:52,818 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,819 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | job 7085529048 has completed (purged errors)
[2026-04-12 12:02:48] 2026-04-12 10:01:52,821 | INFO     | overall cleanup function is called
[2026-04-12 12:02:48] 2026-04-12 10:01:53,829 | INFO     | --- collectZombieJob: --- 10, [1733158]
[2026-04-12 12:02:48] 2026-04-12 10:01:53,829 | INFO     | zombie collector waiting for pid 1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:53,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 12:02:48] 2026-04-12 10:01:53,829 | INFO     | collected zombie processes
[2026-04-12 12:02:48] 2026-04-12 10:01:53,829 | INFO     | will attempt to kill all subprocesses of pid=1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:54,195 | INFO     | process IDs to be killed: [1733158] (in reverse order)
[2026-04-12 12:02:48] 2026-04-12 10:01:54,327 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 12:02:48] 2026-04-12 10:01:54,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 12:02:48] 2026-04-12 10:01:54,340 | INFO     | did not find any defunct processes belonging to 1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:54,351 | INFO     | did not find any defunct processes belonging to 1733158
[2026-04-12 12:02:48] 2026-04-12 10:01:54,352 | INFO     | Ready for new job
[2026-04-12 12:02:48] 2026-04-12 10:01:54,354 | INFO     | **************************************
[2026-04-12 12:02:48] 2026-04-12 10:01:54,354 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 12:02:48] 2026-04-12 10:01:54,354 | INFO     | **************************************
[2026-04-12 12:02:48] 2026-04-12 10:01:54,354 | INFO     | 
[2026-04-12 12:02:48] 2026-04-12 10:01:54,358 | INFO     | architecture information:
[2026-04-12 12:02:48] 2026-04-12 10:01:54,358 | INFO     | executing command: cat /etc/os-release
[2026-04-12 12:02:48] 2026-04-12 10:01:54,375 | INFO     | cat /etc/os-release:
[2026-04-12 12:02:48] NAME="CentOS Linux"
[2026-04-12 12:02:48] VERSION="7 (Core)"
[2026-04-12 12:02:48] ID="centos"
[2026-04-12 12:02:48] ID_LIKE="rhel fedora"
[2026-04-12 12:02:48] VERSION_ID="7"
[2026-04-12 12:02:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 12:02:48] ANSI_COLOR="0;31"
[2026-04-12 12:02:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 12:02:48] HOME_URL="https://www.centos.org/"
[2026-04-12 12:02:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 12:02:48] 
[2026-04-12 12:02:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 12:02:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 12:02:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 12:02:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 12:02:48] 
[2026-04-12 12:02:48] 2026-04-12 10:01:54,375 | INFO     | **************************************
[2026-04-12 12:02:48] 2026-04-12 10:01:54,878 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-12 12:02:48] 2026-04-12 10:01:54,894 | INFO     | sufficient remaining disk space (27138195456 B)
[2026-04-12 12:02:48] 2026-04-12 10:01:54,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 12:02:48] 2026-04-12 10:01:54,894 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 12:02:48] 2026-04-12 10:01:54,895 | INFO     | update_server=False
[2026-04-12 12:02:48] 2026-04-12 10:01:54,895 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 12:02:48] 2026-04-12 10:01:54,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 12:02:48] 2026-04-12 10:01:54,895 | INFO     | aborting loop
[2026-04-12 12:02:48] 2026-04-12 10:01:55,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 12:02:48] 2026-04-12 10:01:55,770 | INFO     | all data control threads have been joined
[2026-04-12 12:02:48] 2026-04-12 10:01:55,900 | INFO     | [job] retrieve thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:55,901 | INFO     | [job] job monitor thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:55,975 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:55,989 | INFO     | all payload control threads have been joined
[2026-04-12 12:02:48] 2026-04-12 10:01:56,063 | INFO     | [data] copytool_in thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,375 | INFO     | [payload] validate_post thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,393 | INFO     | [payload] failed_post thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,495 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,591 | INFO     | all job control threads have been joined
[2026-04-12 12:02:48] 2026-04-12 10:01:56,651 | INFO     | [job] validate thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,775 | INFO     | [data] control thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,896 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:56,994 | INFO     | [payload] control thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:57,220 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:57,310 | INFO     | [data] copytool_out thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:57,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 12:02:48] 2026-04-12 10:01:57,596 | INFO     | [job] control thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:01:58,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 12:02:48] 2026-04-12 10:01:58,532 | INFO     | [job] queue monitor thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:02:02,395 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 12:02:48] 2026-04-12 10:02:25,333 | INFO     | PID=1728300 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 12:02:48] 2026-04-12 10:02:25,333 | INFO     | .. there are 11 such processes running
[2026-04-12 12:02:48] 2026-04-12 10:02:25,334 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 12:02:48] 2026-04-12 10:02:25,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 12:02:48] 2026-04-12 10:02:25,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 12:02:48] 2026-04-12 10:02:42,035 | INFO     | [monitor] cgroup control has ended
[2026-04-12 12:02:48] 2026-04-12 10:02:43,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22624537794368)>', '<ExcThread(monitor, started 22624290993920)>']
[2026-04-12 12:02:48] 2026-04-12 10:02:43,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 12:02:48] 2026-04-12 10:02:43,427 | INFO     | [monitor] control thread has ended
[2026-04-12 12:02:48] 2026-04-12 10:02:48,331 | INFO     | all workflow threads have been joined
[2026-04-12 12:02:48] 2026-04-12 10:02:48,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 12:02:48] 2026-04-12 10:02:48,331 | INFO     | traces error code: 0
[2026-04-12 12:02:48] 2026-04-12 10:02:48,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 12:02:48] 2026-04-12 10:02:48,515 [wrapper] ==== pilot stdout END ====
[2026-04-12 12:02:48] 2026-04-12 10:02:48,518 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 12:02:48] 2026-04-12 10:02:48,520 [wrapper] pilotpid: 1728300
[2026-04-12 12:02:48] 2026-04-12 10:02:48,523 [wrapper] Pilot exit status: 0
[2026-04-12 12:02:48] 2026-04-12 10:02:48,534 [wrapper] pandaids: 7085529048
[2026-04-12 12:02:48] 2026-04-12 10:02:48,615 [wrapper] cleanup supervisor_pilot 1950264 1728301
[2026-04-12 12:02:48] 2026-04-12 10:02:48,618 [wrapper] Test setup, not cleaning
[2026-04-12 12:02:48] 2026-04-12 10:02:48,621 [wrapper] apfmon messages muted
[2026-04-12 12:02:48] 2026-04-12 10:02:48,624 [wrapper] ==== wrapper stdout END ====
[2026-04-12 12:02:48] 2026-04-12 10:02:48,627 [wrapper] ==== wrapper stderr END ====
[2026-04-12 12:02:48]  *** Error codes and diagnostics ***
[2026-04-12 12:02:48]     "exeErrorCode": 0,
[2026-04-12 12:02:48]     "pilotErrorCode": 0,
[2026-04-12 12:02:48]  *** Listing of results directory ***
[2026-04-12 12:02:48] total 419236
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc    644190 Apr 10 17:52 pilot3.tar.gz
[2026-04-12 12:02:48] -rwx------. 1 boinc boinc     36322 Apr 10 17:53 runpilot2-wrapper.sh
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc      5094 Apr 10 17:53 queuedata.json
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc       100 Apr 12 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 12:02:48] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 08:54 run_atlas
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc       105 Apr 12 08:54 job.xml
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc      6483 Apr 12 08:54 init_data.xml
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc 225776924 Apr 12 08:54 EVNT.49263198._000786.pool.root.1
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc     15665 Apr 12 08:54 start_atlas.sh
[2026-04-12 12:02:48] drwxrwx--x. 2 boinc boinc      4096 Apr 12 08:54 shared
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc    656936 Apr 12 08:54 input.tar.gz
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc         0 Apr 12 08:54 boinc_lockfile
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc      2572 Apr 12 08:54 pandaJob.out
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc    997759 Apr 12 08:54 agis_schedconf.cvmfs.json
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc       452 Apr 12 08:54 workernode_map.json
[2026-04-12 12:02:48] drwx------. 5 boinc boinc      4096 Apr 12 08:54 pilot3
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc 196748959 Apr 12 12:01 HITS.49263200._037030.pool.root.1
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc        95 Apr 12 12:01 pilot_heartbeat.json
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc      1033 Apr 12 12:01 memory_monitor_summary.json
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc       487 Apr 12 12:01 boinc_task_state.xml
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc   1511579 Apr 12 12:01 agis_ddmendpoints.agis.ALL.json
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc    293601 Apr 12 12:01 log.49263200._037030.job.log.tgz.1
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc      6420 Apr 12 12:01 heartbeat_new.json
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc      6311 Apr 12 12:01 heartbeat.json
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc      8192 Apr 12 12:02 boinc_mmap_file
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc        27 Apr 12 12:02 wrapper_checkpoint.txt
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc      4828 Apr 12 12:02 pilotlog.txt
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc   1062002 Apr 12 12:02 log.49263200._037030.job.log.1
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc       357 Apr 12 12:02 output.list
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc       410 Apr 12 12:02 runtime_log
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc   1372160 Apr 12 12:02 result.tar.gz
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc      8827 Apr 12 12:02 runtime_log.err
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc       665 Apr 12 12:02 1cf8b249509e.diag
[2026-04-12 12:02:48] -rw-r--r--. 1 boinc boinc     21041 Apr 12 12:02 stderr.txt
[2026-04-12 12:02:48] HITS file was successfully produced:
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc 196748959 Apr 12 12:01 shared/HITS.pool.root.1
[2026-04-12 12:02:48]  *** Contents of shared directory: ***
[2026-04-12 12:02:48] total 414636
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc 225776924 Apr 12 08:54 ATLAS.root_0
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc     15665 Apr 12 08:54 start_atlas.sh
[2026-04-12 12:02:48] -rw-r--r--. 2 boinc boinc    656936 Apr 12 08:54 input.tar.gz
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc 196748959 Apr 12 12:01 HITS.pool.root.1
[2026-04-12 12:02:48] -rw-------. 1 boinc boinc   1372160 Apr 12 12:02 result.tar.gz
12:02:49 (1724516): run_atlas exited; CPU time 43874.914143
12:02:49 (1724516): called boinc_finish(0)

</stderr_txt>
]]>

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