Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:53:09 (5731): wrapper (7.7.26015): starting
17:53:09 (5731): wrapper: running run_atlas (--nthreads 8)
[2026-04-10 17:53:09] Arguments: --nthreads 8
[2026-04-10 17:53:09] Threads: 8
[2026-04-10 17:53:09] Checking for CVMFS
[2026-04-10 17:53:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 17:53:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 17:53:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 17:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 17:53:10] 2.11.2.0 19153 13097 100524 158308 1 102 16656462 25165825 361 130560 0 6694149 99.847 5238053 6881 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-10 17:53:10] CVMFS is ok
[2026-04-10 17:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 17:53:10] Checking for apptainer binary...
[2026-04-10 17:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-10 17:53:10] Running /usr/bin/apptainer --version
[2026-04-10 17:53:10] apptainer version 1.3.2-1.el7
[2026-04-10 17:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 17:53:11] cg-vwn472.simple-grid.lan
[2026-04-10 17:53:11] apptainer works
[2026-04-10 17:53:12] Set ATHENA_PROC_NUMBER=8
[2026-04-10 17:53:12] Set ATHENA_CORE_NUMBER=8
[2026-04-10 17:53:12] Starting ATLAS job with PandaID=7083688041
[2026-04-10 17:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 20:06:57]  *** The last 200 lines of the pilot log: ***
[2026-04-10 20:06:57] 2026-04-10 18:06:45,233 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-04-10 20:06:57] 2026-04-10 18:06:45,233 | INFO     | this job has now completed (state=finished)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,233 | INFO     | log transfer has been attempted: DONE
[2026-04-10 20:06:57] 2026-04-10 18:06:45,233 | INFO     | job 7083688041 has finished - writing final server update
[2026-04-10 20:06:57] 2026-04-10 18:06:45,234 | INFO     | total number of processed events: 400 (read)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,236 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7083688041/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,236 | INFO     | extracted standard info from prmon json
[2026-04-10 20:06:57] 2026-04-10 18:06:45,237 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 20:06:57] 2026-04-10 18:06:45,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 20:06:57] 2026-04-10 18:06:45,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 20:06:57] 2026-04-10 18:06:45,240 | INFO     | fitting pss+swap vs Time
[2026-04-10 20:06:57] 2026-04-10 18:06:45,241 | INFO     | sum of square deviations: 697054930.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,242 | INFO     | sum of deviations: 2669388425.999996
[2026-04-10 20:06:57] 2026-04-10 18:06:45,242 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,242 | INFO     | mean y: 2479729.419847328
[2026-04-10 20:06:57] 2026-04-10 18:06:45,242 | INFO     | intersect: 2479729.419847328
[2026-04-10 20:06:57] 2026-04-10 18:06:45,242 | INFO     | chi2: 2.430480899644781
[2026-04-10 20:06:57] 2026-04-10 18:06:45,243 | INFO     | sum of square deviations: 620244187.5
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | sum of deviations: 11082771183.499987
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | mean y: 2495901.5317460317
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | intersect: 2495901.5317460317
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | chi2: 1.669323411335001
[2026-04-10 20:06:57] 2026-04-10 18:06:45,244 | INFO     | current chi2=1.669323411335001 (change=31.317155729182012 %)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,245 | INFO     | sum of square deviations: 549294020.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,245 | INFO     | sum of deviations: 10662797926.000002
[2026-04-10 20:06:57] 2026-04-10 18:06:45,245 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,246 | INFO     | mean y: 2494998.371900826
[2026-04-10 20:06:57] 2026-04-10 18:06:45,246 | INFO     | intersect: 2494998.371900826
[2026-04-10 20:06:57] 2026-04-10 18:06:45,246 | INFO     | chi2: 1.672255347663593
[2026-04-10 20:06:57] 2026-04-10 18:06:45,246 | INFO     | current chi2=1.672255347663593 (change=-0.17563620738100508 %)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,246 | INFO     | right removable region: 120
[2026-04-10 20:06:57] 2026-04-10 18:06:45,247 | INFO     | sum of square deviations: 620244187.5
[2026-04-10 20:06:57] 2026-04-10 18:06:45,247 | INFO     | sum of deviations: -17389026854.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,247 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,247 | INFO     | mean y: 2518841.0793650793
[2026-04-10 20:06:57] 2026-04-10 18:06:45,248 | INFO     | intersect: 2518841.0793650793
[2026-04-10 20:06:57] 2026-04-10 18:06:45,248 | INFO     | chi2: 0.8981643435435209
[2026-04-10 20:06:57] 2026-04-10 18:06:45,248 | INFO     | current chi2=0.8981643435435209 (change=63.04581765383184 %)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,248 | INFO     | sum of square deviations: 549294020.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,249 | INFO     | sum of deviations: -15895530121.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,249 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,249 | INFO     | mean y: 2515505.2975206613
[2026-04-10 20:06:57] 2026-04-10 18:06:45,249 | INFO     | intersect: 2515505.2975206613
[2026-04-10 20:06:57] 2026-04-10 18:06:45,250 | INFO     | chi2: 0.8826988053818027
[2026-04-10 20:06:57] 2026-04-10 18:06:45,250 | INFO     | current chi2=0.8826988053818027 (change=1.7219051583257226 %)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,250 | INFO     | left removable region: 10
[2026-04-10 20:06:57] 2026-04-10 18:06:45,250 | INFO     | sum of square deviations: 412686807.5
[2026-04-10 20:06:57] 2026-04-10 18:06:45,251 | INFO     | sum of deviations: -7085673959.5
[2026-04-10 20:06:57] 2026-04-10 18:06:45,251 | INFO     | mean x (centered): 0.0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,251 | INFO     | mean y: 2535533.0272727273
[2026-04-10 20:06:57] 2026-04-10 18:06:45,251 | INFO     | intersect: 2535533.0272727273
[2026-04-10 20:06:57] 2026-04-10 18:06:45,252 | INFO     | chi2: 0.08083689542242524
[2026-04-10 20:06:57] 2026-04-10 18:06:45,252 | INFO     | current memory leak: -17.17 B/s (using 110 data points, chi2=0.08)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,252 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,252 | INFO     | ..............................
[2026-04-10 20:06:57] 2026-04-10 18:06:45,252 | INFO     | . Timing measurements:
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . get job = 0 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . initial setup = 7 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . payload setup = 18 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . stage-in = 0 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . payload execution = 7960 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . stage-out = 0 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | . log creation = 0 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,253 | INFO     | ..............................
[2026-04-10 20:06:57] 2026-04-10 18:06:45,366 | INFO     | 
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | job summary report
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | --------------------------------------------------
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | PanDA job id: 7083688041
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | task id: 49263191
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | errors: (none)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | pilot state: finished 
[2026-04-10 20:06:57] 2026-04-10 18:06:45,367 | INFO     | transexitcode: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | exeerrorcode: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | exeerrordiag: 
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | exitcode: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | exitmsg: OK
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | cpuconsumptiontime: 58226 s
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | nevents: 400
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | neventsw: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | pid: 14494
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | pgrp: 14494
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | corecount: 8
[2026-04-10 20:06:57] 2026-04-10 18:06:45,368 | INFO     | event service: False
[2026-04-10 20:06:57] 2026-04-10 18:06:45,369 | INFO     | sizes: {0: 2279012, 1: 2281498, 2: 2281498, 7983: 2309266, 7984: 2318320, 7985: 2318458}
[2026-04-10 20:06:57] 2026-04-10 18:06:45,369 | INFO     | --------------------------------------------------
[2026-04-10 20:06:57] 2026-04-10 18:06:45,369 | INFO     | 
[2026-04-10 20:06:57] 2026-04-10 18:06:45,369 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | job 7083688041 has completed (purged errors)
[2026-04-10 20:06:57] 2026-04-10 18:06:45,397 | INFO     | overall cleanup function is called
[2026-04-10 20:06:57] 2026-04-10 18:06:46,404 | INFO     | --- collectZombieJob: --- 10, [14494]
[2026-04-10 20:06:57] 2026-04-10 18:06:46,404 | INFO     | zombie collector waiting for pid 14494
[2026-04-10 20:06:57] 2026-04-10 18:06:46,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 20:06:57] 2026-04-10 18:06:46,405 | INFO     | collected zombie processes
[2026-04-10 20:06:57] 2026-04-10 18:06:46,405 | INFO     | will attempt to kill all subprocesses of pid=14494
[2026-04-10 20:06:57] 2026-04-10 18:06:46,467 | INFO     | process IDs to be killed: [14494] (in reverse order)
[2026-04-10 20:06:57] 2026-04-10 18:06:46,514 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 20:06:57] 2026-04-10 18:06:46,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 20:06:57] 2026-04-10 18:06:46,517 | INFO     | did not find any defunct processes belonging to 14494
[2026-04-10 20:06:57] 2026-04-10 18:06:46,518 | INFO     | did not find any defunct processes belonging to 14494
[2026-04-10 20:06:57] 2026-04-10 18:06:46,519 | INFO     | Ready for new job
[2026-04-10 20:06:57] 2026-04-10 18:06:46,520 | INFO     | **************************************
[2026-04-10 20:06:57] 2026-04-10 18:06:46,521 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 20:06:57] 2026-04-10 18:06:46,521 | INFO     | **************************************
[2026-04-10 20:06:57] 2026-04-10 18:06:46,521 | INFO     | 
[2026-04-10 20:06:57] 2026-04-10 18:06:46,521 | INFO     | pilot is running in a VM
[2026-04-10 20:06:57] 2026-04-10 18:06:46,521 | INFO     | architecture information:
[2026-04-10 20:06:57] 2026-04-10 18:06:46,522 | INFO     | executing command: cat /etc/os-release
[2026-04-10 20:06:57] 2026-04-10 18:06:46,541 | INFO     | cat /etc/os-release:
[2026-04-10 20:06:57] NAME="CentOS Linux"
[2026-04-10 20:06:57] VERSION="7 (Core)"
[2026-04-10 20:06:57] ID="centos"
[2026-04-10 20:06:57] ID_LIKE="rhel fedora"
[2026-04-10 20:06:57] VERSION_ID="7"
[2026-04-10 20:06:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 20:06:57] ANSI_COLOR="0;31"
[2026-04-10 20:06:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 20:06:57] HOME_URL="https://www.centos.org/"
[2026-04-10 20:06:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 20:06:57] 
[2026-04-10 20:06:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 20:06:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 20:06:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 20:06:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 20:06:57] 
[2026-04-10 20:06:57] 2026-04-10 18:06:46,541 | INFO     | **************************************
[2026-04-10 20:06:57] 2026-04-10 18:06:47,044 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-10 20:06:57] 2026-04-10 18:06:47,066 | INFO     | sufficient remaining disk space (492454281216 B)
[2026-04-10 20:06:57] 2026-04-10 18:06:47,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 20:06:57] 2026-04-10 18:06:47,067 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 20:06:57] 2026-04-10 18:06:47,067 | INFO     | update_server=False
[2026-04-10 20:06:57] 2026-04-10 18:06:47,067 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 20:06:57] 2026-04-10 18:06:47,068 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-10 20:06:57] 2026-04-10 18:06:47,068 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 20:06:57] 2026-04-10 18:06:47,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 20:06:57] 2026-04-10 18:06:47,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 20:06:57] 2026-04-10 18:06:47,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 20:06:57] 2026-04-10 18:06:47,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 20:06:57] 2026-04-10 18:06:47,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 20:06:57] 2026-04-10 18:06:47,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 20:06:57] 2026-04-10 18:06:47,609 | INFO     | aborting loop
[2026-04-10 20:06:57] 2026-04-10 18:06:47,701 | INFO     | all data control threads have been joined
[2026-04-10 20:06:57] 2026-04-10 18:06:47,717 | INFO     | all job control threads have been joined
[2026-04-10 20:06:57] 2026-04-10 18:06:48,070 | INFO     | [job] retrieve thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,075 | INFO     | [job] queue monitor thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,162 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,438 | INFO     | all payload control threads have been joined
[2026-04-10 20:06:57] 2026-04-10 18:06:48,441 | INFO     | [data] copytool_in thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,615 | INFO     | [job] job monitor thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,705 | INFO     | [data] control thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,715 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,723 | INFO     | [job] control thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:48,981 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,120 | INFO     | [payload] validate_post thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,388 | INFO     | [data] copytool_out thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,395 | INFO     | [job] validate thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,402 | INFO     | [payload] failed_post thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:49,444 | INFO     | [payload] control thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:51,076 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 20:06:57] 2026-04-10 18:06:51,586 | INFO     | [monitor] cgroup control has ended
[2026-04-10 20:06:57] 2026-04-10 18:06:52,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056025401152)>', '<ExcThread(monitor, started 140055435790080)>']
[2026-04-10 20:06:57] 2026-04-10 18:06:53,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 20:06:57] 2026-04-10 18:06:53,095 | INFO     | [monitor] control thread has ended
[2026-04-10 20:06:57] 2026-04-10 18:06:57,141 | INFO     | all workflow threads have been joined
[2026-04-10 20:06:57] 2026-04-10 18:06:57,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 20:06:57] 2026-04-10 18:06:57,141 | INFO     | traces error code: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:57,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 20:06:57] 2026-04-10 18:06:57,319 [wrapper] ==== pilot stdout END ====
[2026-04-10 20:06:57] 2026-04-10 18:06:57,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 20:06:57] 2026-04-10 18:06:57,335 [wrapper] pilotpid: 9886
[2026-04-10 20:06:57] 2026-04-10 18:06:57,340 [wrapper] Pilot exit status: 0
[2026-04-10 20:06:57] 2026-04-10 18:06:57,370 [wrapper] pandaids: 7083688041
[2026-04-10 20:06:57] 2026-04-10 18:06:57,428 [wrapper] cleanup supervisor_pilot 24035 9887
[2026-04-10 20:06:57] 2026-04-10 18:06:57,439 [wrapper] Test setup, not cleaning
[2026-04-10 20:06:57] 2026-04-10 18:06:57,447 [wrapper] apfmon messages muted
[2026-04-10 20:06:57] 2026-04-10 18:06:57,455 [wrapper] ==== wrapper stdout END ====
[2026-04-10 20:06:57] 2026-04-10 18:06:57,463 [wrapper] ==== wrapper stderr END ====
[2026-04-10 20:06:57]  *** Error codes and diagnostics ***
[2026-04-10 20:06:57]     "exeErrorCode": 0,
[2026-04-10 20:06:57]     "pilotErrorCode": 0,
[2026-04-10 20:06:57]  *** Listing of results directory ***
[2026-04-10 20:06:57] total 421284
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc    644190 Apr 10 08:21 pilot3.tar.gz
[2026-04-10 20:06:57] -rwx------. 1 boinc boinc     36322 Apr 10 08:21 runpilot2-wrapper.sh
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc      5094 Apr 10 08:27 queuedata.json
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc       100 Apr 10 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 20:06:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 17:53 run_atlas
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc       105 Apr 10 17:53 job.xml
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc      6307 Apr 10 17:53 init_data.xml
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc 225134547 Apr 10 17:53 EVNT.49263189._000624.pool.root.1
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc     15665 Apr 10 17:53 start_atlas.sh
[2026-04-10 20:06:57] drwxrwx--x. 2 boinc boinc        68 Apr 10 17:53 shared
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc    656936 Apr 10 17:53 input.tar.gz
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc         0 Apr 10 17:53 boinc_lockfile
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc      2577 Apr 10 17:53 pandaJob.out
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc    997884 Apr 10 17:53 agis_schedconf.cvmfs.json
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc   1511579 Apr 10 17:53 agis_ddmendpoints.agis.ALL.json
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc       415 Apr 10 17:53 workernode_map.json
[2026-04-10 20:06:57] drwx------. 5 boinc boinc      4096 Apr 10 17:53 pilot3
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc 200042890 Apr 10 20:06 HITS.49263191._035860.pool.root.1
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc        95 Apr 10 20:06 pilot_heartbeat.json
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc       487 Apr 10 20:06 boinc_task_state.xml
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc      1010 Apr 10 20:06 memory_monitor_summary.json
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc    322906 Apr 10 20:06 log.49263191._035860.job.log.tgz.1
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc      6324 Apr 10 20:06 heartbeat_new.json
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc      6215 Apr 10 20:06 heartbeat.json
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc      8192 Apr 10 20:06 boinc_mmap_file
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc        27 Apr 10 20:06 wrapper_checkpoint.txt
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc      4610 Apr 10 20:06 pilotlog.txt
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc    765045 Apr 10 20:06 log.49263191._035860.job.log.1
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc       357 Apr 10 20:06 output.list
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc       410 Apr 10 20:06 runtime_log
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc   1105920 Apr 10 20:06 result.tar.gz
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc      8437 Apr 10 20:06 runtime_log.err
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc       652 Apr 10 20:06 96f28e499b51.diag
[2026-04-10 20:06:57] -rw-r--r--. 1 boinc boinc     20554 Apr 10 20:06 stderr.txt
[2026-04-10 20:06:57] HITS file was successfully produced:
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc 200042890 Apr 10 20:06 shared/HITS.pool.root.1
[2026-04-10 20:06:57]  *** Contents of shared directory: ***
[2026-04-10 20:06:57] total 416956
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc 225134547 Apr 10 17:53 ATLAS.root_0
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc     15665 Apr 10 17:53 start_atlas.sh
[2026-04-10 20:06:57] -rw-r--r--. 2 boinc boinc    656936 Apr 10 17:53 input.tar.gz
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc 200042890 Apr 10 20:06 HITS.pool.root.1
[2026-04-10 20:06:57] -rw-------. 1 boinc boinc   1105920 Apr 10 20:06 result.tar.gz
20:06:59 (5731): run_atlas exited; CPU time 58291.613456
20:06:59 (5731): called boinc_finish(0)

</stderr_txt>
]]>

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