Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:15:14 (2104283): wrapper (7.7.26015): starting
08:15:14 (2104283): wrapper: running run_atlas (--nthreads 12)
[2026-04-12 08:15:14] Arguments: --nthreads 12
[2026-04-12 08:15:14] Threads: 12
[2026-04-12 08:15:14] Checking for CVMFS
[2026-04-12 08:15:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-12 08:15:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-12 08:15:15] Running cvmfs_config stat atlas.cern.ch
[2026-04-12 08:15:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-12 08:15:16] 2.13.3.0 333970 2824 68876 158372 3 9 2730774 4096000 17328 130560 0 25713674 99.999 109787 1594 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-12 08:15:16] CVMFS is ok
[2026-04-12 08:15:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 08:15:16] Checking for apptainer binary...
[2026-04-12 08:15:16] apptainer is not installed, using version from CVMFS
[2026-04-12 08:15:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 08:15:18] epyc7v12
[2026-04-12 08:15:18] apptainer works
[2026-04-12 08:15:18] Set ATHENA_PROC_NUMBER=12
[2026-04-12 08:15:18] Set ATHENA_CORE_NUMBER=12
[2026-04-12 08:15:18] Starting ATLAS job with PandaID=7082890494
[2026-04-12 08:15:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31424/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 10:14:28]  *** The last 200 lines of the pilot log: ***
[2026-04-12 10:14:28] 2026-04-12 10:13:31,825 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31424/slots/2/workernode_map.json
[2026-04-12 10:14:28] 2026-04-12 10:13:31,826 | INFO     | this job has now completed (state=finished)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,828 | INFO     | log transfer has been attempted: DONE
[2026-04-12 10:14:28] 2026-04-12 10:13:31,828 | INFO     | job 7082890494 has finished - writing final server update
[2026-04-12 10:14:28] 2026-04-12 10:13:31,829 | INFO     | total number of processed events: 400 (read)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,911 | INFO     | using path: /opt/boinc/instance_homes/boinc_31424/slots/2/PanDA_Pilot-7082890494/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,912 | INFO     | extracted standard info from prmon json
[2026-04-12 10:14:28] 2026-04-12 10:13:31,912 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 10:14:28] 2026-04-12 10:13:31,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 10:14:28] 2026-04-12 10:13:31,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 10:14:28] 2026-04-12 10:13:31,920 | INFO     | fitting pss+swap vs Time
[2026-04-12 10:14:28] 2026-04-12 10:13:31,921 | INFO     | sum of square deviations: 471562330.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,922 | INFO     | sum of deviations: 16746738090.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,922 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,922 | INFO     | mean y: 2585216.356521739
[2026-04-12 10:14:28] 2026-04-12 10:13:31,922 | INFO     | intersect: 2585216.356521739
[2026-04-12 10:14:28] 2026-04-12 10:13:31,925 | INFO     | chi2: 2.701043536140305
[2026-04-12 10:14:28] 2026-04-12 10:13:31,926 | INFO     | sum of square deviations: 412686807.5
[2026-04-12 10:14:28] 2026-04-12 10:13:31,926 | INFO     | sum of deviations: 23761841149.5
[2026-04-12 10:14:28] 2026-04-12 10:13:31,926 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,927 | INFO     | mean y: 2602671.6454545455
[2026-04-12 10:14:28] 2026-04-12 10:13:31,927 | INFO     | intersect: 2602671.6454545455
[2026-04-12 10:14:28] 2026-04-12 10:13:31,927 | INFO     | chi2: 1.9698150964303653
[2026-04-12 10:14:28] 2026-04-12 10:13:31,927 | INFO     | current chi2=1.9698150964303653 (change=27.07207158737023 %)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,927 | INFO     | sum of square deviations: 358927660.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,928 | INFO     | sum of deviations: 22781122220.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,928 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,928 | INFO     | mean y: 2599887.5523809525
[2026-04-12 10:14:28] 2026-04-12 10:13:31,928 | INFO     | intersect: 2599887.5523809525
[2026-04-12 10:14:28] 2026-04-12 10:13:31,929 | INFO     | chi2: 1.9705873944815813
[2026-04-12 10:14:28] 2026-04-12 10:13:31,929 | INFO     | current chi2=1.9705873944815813 (change=-0.03920662668366479 %)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,929 | INFO     | right removable region: 104
[2026-04-12 10:14:28] 2026-04-12 10:13:31,932 | INFO     | sum of square deviations: 412686807.5
[2026-04-12 10:14:28] 2026-04-12 10:13:31,933 | INFO     | sum of deviations: -6752284803.5
[2026-04-12 10:14:28] 2026-04-12 10:13:31,933 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,933 | INFO     | mean y: 2645335.827272727
[2026-04-12 10:14:28] 2026-04-12 10:13:31,933 | INFO     | intersect: 2645335.827272727
[2026-04-12 10:14:28] 2026-04-12 10:13:31,934 | INFO     | chi2: 0.8805829268970519
[2026-04-12 10:14:28] 2026-04-12 10:13:31,935 | INFO     | current chi2=0.8805829268970519 (change=67.39841786647492 %)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,935 | INFO     | sum of square deviations: 358927660.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,936 | INFO     | sum of deviations: -11864589548.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,936 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,936 | INFO     | mean y: 2659624.8476190474
[2026-04-12 10:14:28] 2026-04-12 10:13:31,936 | INFO     | intersect: 2659624.8476190474
[2026-04-12 10:14:28] 2026-04-12 10:13:31,936 | INFO     | chi2: 0.7684304440604245
[2026-04-12 10:14:28] 2026-04-12 10:13:31,937 | INFO     | current chi2=0.7684304440604245 (change=12.736163671923997 %)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,937 | INFO     | left removable region: 10
[2026-04-12 10:14:28] 2026-04-12 10:13:31,937 | INFO     | sum of square deviations: 257521107.5
[2026-04-12 10:14:28] 2026-04-12 10:13:31,937 | INFO     | sum of deviations: -3851699210.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,938 | INFO     | mean x (centered): 0.0
[2026-04-12 10:14:28] 2026-04-12 10:13:31,938 | INFO     | mean y: 2683913.0425531915
[2026-04-12 10:14:28] 2026-04-12 10:13:31,943 | INFO     | intersect: 2683913.0425531915
[2026-04-12 10:14:28] 2026-04-12 10:13:31,943 | INFO     | chi2: 0.003234244161586207
[2026-04-12 10:14:28] 2026-04-12 10:13:31,944 | INFO     | current memory leak: -14.96 B/s (using 94 data points, chi2=0.00)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,944 | INFO     | could have reported an average CPU frequency of 2395 MHz (7 samples)
[2026-04-12 10:14:28] 2026-04-12 10:13:31,944 | INFO     | ..............................
[2026-04-12 10:14:28] 2026-04-12 10:13:31,944 | INFO     | . Timing measurements:
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . get job = 0 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . initial setup = 16 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . payload setup = 27 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . stage-in = 0 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . payload execution = 7004 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . stage-out = 1 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | . log creation = 0 s
[2026-04-12 10:14:28] 2026-04-12 10:13:31,945 | INFO     | ..............................
[2026-04-12 10:14:28] 2026-04-12 10:13:32,440 | INFO     | 
[2026-04-12 10:14:28] 2026-04-12 10:13:32,440 | INFO     | job summary report
[2026-04-12 10:14:28] 2026-04-12 10:13:32,440 | INFO     | --------------------------------------------------
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | PanDA job id: 7082890494
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | task id: 49263208
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | errors: (none)
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | pilot state: finished 
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | transexitcode: 0
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | exeerrorcode: 0
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | exeerrordiag: 
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | exitcode: 0
[2026-04-12 10:14:28] 2026-04-12 10:13:32,441 | INFO     | exitmsg: OK
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | cpuconsumptiontime: 44888 s
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | nevents: 400
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | neventsw: 0
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | pid: 2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | pgrp: 2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | corecount: 12
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | event service: False
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | sizes: {0: 2279010, 1: 2279718, 2: 2281547, 7036: 2308889, 7039: 2317933, 7041: 2318311}
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | --------------------------------------------------
[2026-04-12 10:14:28] 2026-04-12 10:13:32,442 | INFO     | 
[2026-04-12 10:14:28] 2026-04-12 10:13:32,443 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31424/slots/2
[2026-04-12 10:14:28] 2026-04-12 10:13:32,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,502 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 10:14:28] 2026-04-12 10:13:32,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 10:14:28] 2026-04-12 10:13:32,502 | INFO     | job 7082890494 has completed (purged errors)
[2026-04-12 10:14:28] 2026-04-12 10:13:32,502 | INFO     | overall cleanup function is called
[2026-04-12 10:14:28] 2026-04-12 10:13:33,519 | INFO     | --- collectZombieJob: --- 10, [2113799]
[2026-04-12 10:14:28] 2026-04-12 10:13:33,519 | INFO     | zombie collector waiting for pid 2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:33,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 10:14:28] 2026-04-12 10:13:33,520 | INFO     | collected zombie processes
[2026-04-12 10:14:28] 2026-04-12 10:13:33,520 | INFO     | will attempt to kill all subprocesses of pid=2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:34,721 | INFO     | process IDs to be killed: [2113799] (in reverse order)
[2026-04-12 10:14:28] 2026-04-12 10:13:35,158 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 10:14:28] 2026-04-12 10:13:35,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 10:14:28] 2026-04-12 10:13:35,189 | INFO     | did not find any defunct processes belonging to 2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:35,205 | INFO     | did not find any defunct processes belonging to 2113799
[2026-04-12 10:14:28] 2026-04-12 10:13:35,206 | INFO     | Ready for new job
[2026-04-12 10:14:28] 2026-04-12 10:13:35,208 | INFO     | **************************************
[2026-04-12 10:14:28] 2026-04-12 10:13:35,208 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 10:14:28] 2026-04-12 10:13:35,208 | INFO     | **************************************
[2026-04-12 10:14:28] 2026-04-12 10:13:35,208 | INFO     | 
[2026-04-12 10:14:28] 2026-04-12 10:13:35,217 | INFO     | architecture information:
[2026-04-12 10:14:28] 2026-04-12 10:13:35,218 | INFO     | executing command: cat /etc/os-release
[2026-04-12 10:14:28] 2026-04-12 10:13:35,265 | INFO     | cat /etc/os-release:
[2026-04-12 10:14:28] NAME="CentOS Linux"
[2026-04-12 10:14:28] VERSION="7 (Core)"
[2026-04-12 10:14:28] ID="centos"
[2026-04-12 10:14:28] ID_LIKE="rhel fedora"
[2026-04-12 10:14:28] VERSION_ID="7"
[2026-04-12 10:14:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 10:14:28] ANSI_COLOR="0;31"
[2026-04-12 10:14:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 10:14:28] HOME_URL="https://www.centos.org/"
[2026-04-12 10:14:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 10:14:28] 
[2026-04-12 10:14:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 10:14:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 10:14:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 10:14:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 10:14:28] 
[2026-04-12 10:14:28] 2026-04-12 10:13:35,266 | INFO     | **************************************
[2026-04-12 10:14:28] 2026-04-12 10:13:35,768 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31424/slots/2
[2026-04-12 10:14:28] 2026-04-12 10:13:35,813 | INFO     | sufficient remaining disk space (327372767232 B)
[2026-04-12 10:14:28] 2026-04-12 10:13:35,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 10:14:28] 2026-04-12 10:13:35,813 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 10:14:28] 2026-04-12 10:13:35,813 | INFO     | update_server=False
[2026-04-12 10:14:28] 2026-04-12 10:13:35,813 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 10:14:28] 2026-04-12 10:13:35,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 10:14:28] 2026-04-12 10:13:36,148 | INFO     | all data control threads have been joined
[2026-04-12 10:14:28] 2026-04-12 10:13:36,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 10:14:28] 2026-04-12 10:13:36,361 | INFO     | aborting loop
[2026-04-12 10:14:28] 2026-04-12 10:13:36,821 | INFO     | [job] retrieve thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,061 | INFO     | all payload control threads have been joined
[2026-04-12 10:14:28] 2026-04-12 10:13:37,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 10:14:28] 2026-04-12 10:13:37,156 | INFO     | [data] control thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,236 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,366 | INFO     | [job] job monitor thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,399 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,402 | INFO     | all job control threads have been joined
[2026-04-12 10:14:28] 2026-04-12 10:13:37,795 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,821 | INFO     | [data] copytool_out thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:37,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 10:14:28] 2026-04-12 10:13:37,999 | INFO     | [data] copytool_in thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,062 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,066 | INFO     | [payload] control thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,133 | INFO     | [job] queue monitor thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,240 | INFO     | [payload] validate_post thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,309 | INFO     | [job] validate thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,366 | INFO     | [payload] failed_post thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:38,407 | INFO     | [job] control thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:13:41,836 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 10:14:28] 2026-04-12 10:14:05,706 | INFO     | PID=2108813 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 10:14:28] 2026-04-12 10:14:05,707 | INFO     | .. there are 20 such processes running
[2026-04-12 10:14:28] 2026-04-12 10:14:05,707 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 10:14:28] 2026-04-12 10:14:05,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 10:14:28] 2026-04-12 10:14:05,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 10:14:28] 2026-04-12 10:14:20,335 | INFO     | [monitor] cgroup control has ended
[2026-04-12 10:14:28] 2026-04-12 10:14:22,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134936005433152)>', '<ExcThread(monitor, started 134935669077760)>']
[2026-04-12 10:14:28] 2026-04-12 10:14:22,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 10:14:28] 2026-04-12 10:14:22,800 | INFO     | [monitor] control thread has ended
[2026-04-12 10:14:28] 2026-04-12 10:14:27,447 | INFO     | all workflow threads have been joined
[2026-04-12 10:14:28] 2026-04-12 10:14:27,447 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 10:14:28] 2026-04-12 10:14:27,448 | INFO     | traces error code: 0
[2026-04-12 10:14:28] 2026-04-12 10:14:27,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 10:14:28] 2026-04-12 10:14:27,834 [wrapper] ==== pilot stdout END ====
[2026-04-12 10:14:28] 2026-04-12 10:14:27,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 10:14:28] 2026-04-12 10:14:27,852 [wrapper] pilotpid: 2108813
[2026-04-12 10:14:28] 2026-04-12 10:14:27,860 [wrapper] Pilot exit status: 0
[2026-04-12 10:14:28] 2026-04-12 10:14:27,898 [wrapper] pandaids: 7082890494
[2026-04-12 10:14:28] 2026-04-12 10:14:28,060 [wrapper] cleanup supervisor_pilot 2322263 2108814
[2026-04-12 10:14:28] 2026-04-12 10:14:28,068 [wrapper] Test setup, not cleaning
[2026-04-12 10:14:28] 2026-04-12 10:14:28,077 [wrapper] apfmon messages muted
[2026-04-12 10:14:28] 2026-04-12 10:14:28,086 [wrapper] ==== wrapper stdout END ====
[2026-04-12 10:14:28] 2026-04-12 10:14:28,094 [wrapper] ==== wrapper stderr END ====
[2026-04-12 10:14:28]  *** Error codes and diagnostics ***
[2026-04-12 10:14:28]     "exeErrorCode": 0,
[2026-04-12 10:14:28]     "pilotErrorCode": 0,
[2026-04-12 10:14:28]  *** Listing of results directory ***
[2026-04-12 10:14:28] total 406780
[2026-04-12 10:14:28] -rwx------ 1 boinc boinc     36322 Apr  8 20:02 runpilot2-wrapper.sh
[2026-04-12 10:14:28] -rw-r--r-- 1 boinc boinc    644190 Apr 10 04:42 pilot3.tar.gz
[2026-04-12 10:14:28] -rw-r--r-- 1 boinc boinc      5094 Apr 10 05:12 queuedata.json
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc       100 Apr 12 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 10:14:28] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 08:15 run_atlas
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc       105 Apr 12 08:15 job.xml
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc 222333901 Apr 12 08:15 EVNT.49263206._000468.pool.root.1
[2026-04-12 10:14:28] drwxrwx--x 2 boinc boinc      4096 Apr 12 08:15 shared
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc    656935 Apr 12 08:15 input.tar.gz
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc     15665 Apr 12 08:15 start_atlas.sh
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc      6473 Apr 12 08:15 init_data.xml
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc         0 Apr 12 08:15 boinc_setup_complete
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc         0 Apr 12 08:15 boinc_lockfile
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc      2575 Apr 12 08:15 pandaJob.out
[2026-04-12 10:14:28] -rw------- 1 boinc boinc    997759 Apr 12 08:15 agis_schedconf.cvmfs.json
[2026-04-12 10:14:28] -rw------- 1 boinc boinc   1511579 Apr 12 08:15 agis_ddmendpoints.agis.ALL.json
[2026-04-12 10:14:28] -rw------- 1 boinc boinc       417 Apr 12 08:16 workernode_map.json
[2026-04-12 10:14:28] drwx------ 5 boinc boinc      4096 Apr 12 08:16 pilot3
[2026-04-12 10:14:28] -rw------- 1 boinc boinc 188070089 Apr 12 10:12 HITS.49263208._025058.pool.root.1
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc       488 Apr 12 10:12 boinc_task_state.xml
[2026-04-12 10:14:28] -rw------- 1 boinc boinc      1024 Apr 12 10:13 memory_monitor_summary.json
[2026-04-12 10:14:28] -rw------- 1 boinc boinc    382655 Apr 12 10:13 log.49263208._025058.job.log.tgz.1
[2026-04-12 10:14:28] -rw------- 1 boinc boinc      6300 Apr 12 10:13 heartbeat_new.json
[2026-04-12 10:14:28] -rw------- 1 boinc boinc      6191 Apr 12 10:13 heartbeat.json
[2026-04-12 10:14:28] -rw------- 1 boinc boinc        95 Apr 12 10:14 pilot_heartbeat.json
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 10:14 boinc_mmap_file
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc        27 Apr 12 10:14 wrapper_checkpoint.txt
[2026-04-12 10:14:28] -rw------- 1 boinc boinc      4843 Apr 12 10:14 pilotlog.txt
[2026-04-12 10:14:28] -rw------- 1 boinc boinc    657323 Apr 12 10:14 log.49263208._025058.job.log.1
[2026-04-12 10:14:28] -rw------- 1 boinc boinc       357 Apr 12 10:14 output.list
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc       410 Apr 12 10:14 runtime_log
[2026-04-12 10:14:28] -rw------- 1 boinc boinc   1054720 Apr 12 10:14 result.tar.gz
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc      8788 Apr 12 10:14 runtime_log.err
[2026-04-12 10:14:28] -rw------- 1 boinc boinc       652 Apr 12 10:14 b44e0263ebf9.diag
[2026-04-12 10:14:28] -rw-rw-r-- 1 boinc boinc     20783 Apr 12 10:14 stderr.txt
[2026-04-12 10:14:28] HITS file was successfully produced:
[2026-04-12 10:14:28] -rw------- 1 boinc boinc 188070089 Apr 12 10:12 shared/HITS.pool.root.1
[2026-04-12 10:14:28]  *** Contents of shared directory: ***
[2026-04-12 10:14:28] total 402488
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc 222333901 Apr 12 08:15 ATLAS.root_0
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc    656935 Apr 12 08:15 input.tar.gz
[2026-04-12 10:14:28] -rw-r--r-- 2 boinc boinc     15665 Apr 12 08:15 start_atlas.sh
[2026-04-12 10:14:28] -rw------- 1 boinc boinc 188070089 Apr 12 10:12 HITS.pool.root.1
[2026-04-12 10:14:28] -rw------- 1 boinc boinc   1054720 Apr 12 10:14 result.tar.gz
10:14:29 (2104283): run_atlas exited; CPU time 45286.743552
10:14:29 (2104283): called boinc_finish(0)

</stderr_txt>
]]>

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