Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-10 14:32:18 (15624): vboxwrapper version 26210
2026-04-10 14:32:18 (15624): BOINC client version: 8.2.9
2026-04-10 14:32:19 (15624): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-10 14:32:19 (15624): Successfully copied 'init_data.xml' to the shared directory.
2026-04-10 14:32:19 (15624): Create VM. (boinc_b472f25726be86d8, slot#4)
2026-04-10 14:32:20 (15624): Setting Memory Size for VM. (4800MB)
2026-04-10 14:32:20 (15624): Setting CPU Count for VM. (8)
2026-04-10 14:32:20 (15624): Setting Chipset Options for VM.
2026-04-10 14:32:20 (15624): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-10 14:32:21 (15624): Setting Boot Options for VM.
2026-04-10 14:32:21 (15624): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-10 14:32:21 (15624): Enabling VM Network Access.
2026-04-10 14:32:22 (15624): Disabling USB Support for VM.
2026-04-10 14:32:22 (15624): Disabling COM Port Support for VM.
2026-04-10 14:32:22 (15624): Disabling LPT Port Support for VM.
2026-04-10 14:32:23 (15624): Disabling Audio Support for VM.
2026-04-10 14:32:23 (15624): Disabling Clipboard Support for VM.
2026-04-10 14:32:23 (15624): Disabling Drag and Drop Support for VM.
2026-04-10 14:32:23 (15624): Adding storage controller(s) to VM.
2026-04-10 14:32:24 (15624): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-10 14:32:24 (15624): Adding VirtualBox Guest Additions to VM.
2026-04-10 14:32:24 (15624): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-10 14:32:25 (15624): forwarding host port 57195 to guest port 80
2026-04-10 14:32:25 (15624): Enabling remote desktop for VM.
2026-04-10 14:32:25 (15624): Required extension pack not installed, remote desktop not enabled.
2026-04-10 14:32:25 (15624): Enabling shared directory for VM.
2026-04-10 14:32:26 (15624): Starting VM using VBoxManage interface. (boinc_b472f25726be86d8, slot#4)
2026-04-10 14:32:30 (15624): Successfully started VM. (PID = '8440')
2026-04-10 14:32:30 (15624): Reporting VM Process ID to BOINC.
2026-04-10 14:32:30 (15624): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-10 14:32:30 (15624): Guest Log: CPUID EDX: 0x178bfbff
2026-04-10 14:32:30 (15624): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-10 14:32:30 (15624): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-10 14:32:30 (15624): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-10 14:32:30 (15624): Detected: Web Application Enabled (http://localhost:57195)
2026-04-10 14:32:30 (15624): Preference change detected
2026-04-10 14:32:30 (15624): Setting CPU throttle for VM. (100%)
2026-04-10 14:32:31 (15624): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 14:32:32 (15624): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-10 14:32:32 (15624): Guest Log: BIOS: Booting from Hard Disk...
2026-04-10 14:32:35 (15624): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-10 14:32:35 (15624): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-10 14:32:35 (15624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-10 14:32:42 (15624): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-10 14:32:42 (15624): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-10 14:32:46 (15624): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000137 main     Log opened 2026-04-10T14:32:44.250814000Z
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000207 main     OS Product: Linux
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000229 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000262 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000262 main     Process ID: 1369
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000263 main     Package type: LINUX_64BITS_GENERIC
2026-04-10 14:32:46 (15624): Guest Log: 00:00:00.000774 main     5.2.32 r132073 started. Verbose level = 0
2026-04-10 14:32:46 (15624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-10 14:32:46 (15624): Guest Log: [INFO] Mounting shared directory
2026-04-10 14:32:46 (15624): Guest Log: [INFO] Checking for init_data.xml
2026-04-10 14:32:51 (15624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-10 14:32:51 (15624): Guest Log: [INFO] Detected branch: prod
2026-04-10 14:32:51 (15624): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-10 14:32:51 (15624): Guest Log: Copying input files
2026-04-10 14:32:52 (15624): Guest Log: Copied input files into RunAtlas.
2026-04-10 14:32:52 (15624): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-10 14:32:52 (15624): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-10 14:32:52 (15624): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-10 14:32:52 (15624): Guest Log: Further information can be found at the LHC@home message board.
2026-04-10 14:32:56 (15624): Guest Log: 00:00:10.004688 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 943 582 000ns (GuestNow=1 775 824 376 308 867 000 ns GuestLast=1 775 831 564 252 449 000 ns fSetTimeLastLoop=true )
2026-04-10 14:33:00 (15624): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-10 14:33:00 (15624): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-10 14:33:00 (15624): Guest Log: 2.6.3.0 1646 0 29960 158301 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-10 14:33:01 (15624): Guest Log: copied the webapp to /var/www
2026-04-10 14:33:01 (15624): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-10 14:33:01 (15624): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-10 14:33:01 (15624): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-10 14:33:01 (15624): Guest Log:  *** Starting ATLAS job. (PandaID=7083736513 taskID=49263200) ***
2026-04-10 16:13:32 (15624): Status Report: Elapsed Time: '6000.000000'
2026-04-10 16:13:32 (15624): Status Report: CPU Time: '43059.921875'
2026-04-10 16:15:56 (15624): Guest Log:  *** Job finished ***
2026-04-10 16:15:56 (15624): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:14:59,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:03,176 | INFO     | [data] queue_monitor thread has finished
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:45,943 | INFO     | [monitor] cgroup control has ended
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:47,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975431137088)>', '<ExcThread(monitor, started 139974678648576)>']
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:47,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:47,989 | INFO     | [monitor] control thread has ended
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,018 | INFO     | all workflow threads have been joined
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,019 | INFO     | end of generic workflow (traces error code: 0)
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,019 | INFO     | traces error code: 0
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,114 [wrapper] ==== pilot stdout END ====
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,120 [wrapper] ==== wrapper stdout RESUME ====
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,125 [wrapper] pilotpid: 6084
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,129 [wrapper] Pilot exit status: 0
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,183 [wrapper] pandaids: 7083736513
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,212 [wrapper] cleanup supervisor_pilot 25581 6085
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,220 [wrapper] Test setup, not cleaning
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,224 [wrapper] apfmon messages muted
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,228 [wrapper] ==== wrapper stdout END ====
2026-04-10 16:15:56 (15624): Guest Log: 2026-04-10 14:15:52,232 [wrapper] ==== wrapper stderr END ====
2026-04-10 16:15:56 (15624): Guest Log:  *** Error codes and diagnostics ***
2026-04-10 16:15:56 (15624): Guest Log:     "exeErrorCode": 0,
2026-04-10 16:15:56 (15624): Guest Log:     "pilotErrorCode": 0,
2026-04-10 16:15:56 (15624): Guest Log:  *** Listing of results directory ***
2026-04-10 16:15:56 (15624): Guest Log: total 199428
2026-04-10 16:15:56 (15624): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 10 06:21 pilot3.tar.gz
2026-04-10 16:15:56 (15624): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 10 06:22 runpilot2-wrapper.sh
2026-04-10 16:15:56 (15624): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 10 06:27 queuedata.json
2026-04-10 16:15:56 (15624): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 10 12:32 start_atlas.sh
2026-04-10 16:15:56 (15624): Guest Log: -rwxr-xr-x. 1 atlas atlas    656936 Apr 10 12:32 input.tar.gz
2026-04-10 16:15:56 (15624): Guest Log: -rwxr-xr-x. 1 atlas atlas      8908 Apr 10 12:32 init_data.xml
2026-04-10 16:15:56 (15624): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 10 12:32 EVNT.49263198._000714.pool.root.1 -> /data/./ATLAS.root_0
2026-04-10 16:15:56 (15624): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Apr 10 12:33 pandaJob.out
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas    997900 Apr 10 12:33 agis_schedconf.cvmfs.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 10 12:33 agis_ddmendpoints.agis.ALL.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas       419 Apr 10 12:33 workernode_map.json
2026-04-10 16:15:56 (15624): Guest Log: drwx------. 5 atlas atlas      4096 Apr 10 12:33 pilot3
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas 198438424 Apr 10 14:14 HITS.49263200._035185.pool.root.1
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas        95 Apr 10 14:14 pilot_heartbeat.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 10 14:14 memory_monitor_summary.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas    323462 Apr 10 14:14 log.49263200._035185.job.log.tgz.1
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas      6351 Apr 10 14:14 heartbeat_new.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas      6242 Apr 10 14:14 heartbeat.json
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas      5194 Apr 10 14:15 pilotlog.txt
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas    569422 Apr 10 14:15 log.49263200._035185.job.log.1
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas       357 Apr 10 14:15 output.list
2026-04-10 16:15:56 (15624): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 10 14:15 runtime_log
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas    911360 Apr 10 14:15 result.tar.gz
2026-04-10 16:15:56 (15624): Guest Log: -rw-r--r--. 1 atlas atlas      8346 Apr 10 14:15 runtime_log.err
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas       646 Apr 10 14:15 9725563ada90.diag
2026-04-10 16:15:56 (15624): Guest Log: Looking for outputfile HITS.49263200._035185.pool.root.1
2026-04-10 16:15:56 (15624): Guest Log: HITS file was successfully produced
2026-04-10 16:15:56 (15624): Guest Log: -rw-------. 1 atlas atlas 198438424 Apr 10 14:14 /home/atlas/RunAtlas/HITS.49263200._035185.pool.root.1
2026-04-10 16:15:57 (15624): Guest Log: Successfully finished the ATLAS job!
2026-04-10 16:15:57 (15624): Guest Log: Copying the results back to the shared directory!
2026-04-10 16:15:57 (15624): Guest Log:  *** Contents of shared directory: ***
2026-04-10 16:15:57 (15624): Guest Log: total 412928
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root 222794380 Apr 10 12:32 ATLAS.root_0
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root 198438424 Apr 10  2026 HITS.pool.root.1
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root      8908 Apr 10 12:32 init_data.xml
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root    656936 Apr 10 10:32 input.tar.gz
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root    911360 Apr 10  2026 result.tar.gz
2026-04-10 16:15:57 (15624): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 10 10:32 start_atlas.sh
2026-04-10 16:15:57 (15624): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-10 16:15:57 (15624): VM Completion File Detected.
2026-04-10 16:15:57 (15624): Powering off VM.
2026-04-10 16:15:58 (15624): Successfully stopped VM.
2026-04-10 16:15:58 (15624): Deregistering VM. (boinc_b472f25726be86d8, slot#4)
2026-04-10 16:15:58 (15624): Removing network bandwidth throttle group from VM.
2026-04-10 16:15:58 (15624): Removing VM from VirtualBox.
2026-04-10 16:16:03 (15624): called boinc_finish(0)

</stderr_txt>
]]>

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