Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:26 (897492): wrapper (7.7.26015): starting
07:54:26 (897492): wrapper: running run_atlas (--nthreads 4)
[2026-04-13 07:54:26] Arguments: --nthreads 4
[2026-04-13 07:54:26] Threads: 4
[2026-04-13 07:54:26] Checking for CVMFS
[2026-04-13 07:54:26] No cvmfs_config command found, will try listing directly
[2026-04-13 07:54:26] CVMFS is ok
[2026-04-13 07:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-13 07:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-13 07:54:26] Further information can be found at the LHC@home message board.
[2026-04-13 07:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-13 07:54:26] Checking for apptainer binary...
[2026-04-13 07:54:26] which: no apptainer in ((null))
[2026-04-13 07:54:26] apptainer is not installed, using version from CVMFS
[2026-04-13 07:54:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-13 07:54:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/19/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-13 07:54:27] apptainer works
[2026-04-13 07:54:27] Set ATHENA_PROC_NUMBER=4
[2026-04-13 07:54:27] Set ATHENA_CORE_NUMBER=4
[2026-04-13 07:54:27] Starting ATLAS job with PandaID=7083736248
[2026-04-13 07:54:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-13 11:32:27]  *** The last 200 lines of the pilot log: ***
[2026-04-13 11:32:27] 2026-04-13 09:31:36,039 | INFO     | log transfer has been attempted: DONE
[2026-04-13 11:32:27] 2026-04-13 09:31:36,040 | INFO     | job 7083736248 has finished - writing final server update
[2026-04-13 11:32:27] 2026-04-13 09:31:36,044 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_770923/.job.ad'
[2026-04-13 11:32:27] 2026-04-13 09:31:36,044 | INFO     | total number of processed events: 400 (read)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,099 | INFO     | using path: /var/lib/boinc/var/slot40/slots/19/PanDA_Pilot-7083736248/memory_monitor_summary.json (trf name=prmon)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,100 | INFO     | extracted standard info from prmon json
[2026-04-13 11:32:27] 2026-04-13 09:31:36,100 | INFO     | extracted standard memory fields from prmon json
[2026-04-13 11:32:27] 2026-04-13 09:31:36,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-13 11:32:27] 2026-04-13 09:31:36,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-13 11:32:27] 2026-04-13 09:31:36,125 | INFO     | fitting pss+swap vs Time
[2026-04-13 11:32:27] 2026-04-13 09:31:36,125 | INFO     | sum of square deviations: 2996396134.7699537
[2026-04-13 11:32:27] 2026-04-13 09:31:36,150 | INFO     | monitor loop #789: job 0:7083736248 is in state 'finished'
[2026-04-13 11:32:27] 2026-04-13 09:31:36,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,153 | INFO     | sum of deviations: 21262285763.920185
[2026-04-13 11:32:27] 2026-04-13 09:31:36,153 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,154 | INFO     | mean y: 2297992.868544601
[2026-04-13 11:32:27] 2026-04-13 09:31:36,154 | INFO     | intersect: 2297992.868544601
[2026-04-13 11:32:27] 2026-04-13 09:31:36,154 | INFO     | chi2: 2.3572168968719316
[2026-04-13 11:32:27] 2026-04-13 09:31:36,154 | INFO     | sum of square deviations: 2790292079.7644095
[2026-04-13 11:32:27] 2026-04-13 09:31:36,156 | INFO     | sum of deviations: 33499272634.278862
[2026-04-13 11:32:27] 2026-04-13 09:31:36,178 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,178 | INFO     | mean y: 2306862.8173076925
[2026-04-13 11:32:27] 2026-04-13 09:31:36,178 | INFO     | intersect: 2306862.8173076925
[2026-04-13 11:32:27] 2026-04-13 09:31:36,178 | INFO     | chi2: 1.5931249730486836
[2026-04-13 11:32:27] 2026-04-13 09:31:36,179 | INFO     | current chi2=1.5931249730486836 (change=32.4150028297019 %)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,179 | INFO     | sum of square deviations: 2593862624.7586155
[2026-04-13 11:32:27] 2026-04-13 09:31:36,180 | INFO     | sum of deviations: 32412163749.482758
[2026-04-13 11:32:27] 2026-04-13 09:31:36,180 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | mean y: 2306018.645320197
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | intersect: 2306018.645320197
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | chi2: 1.59410499091748
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | current chi2=1.59410499091748 (change=-0.061515442000825094 %)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | right removable region: 202
[2026-04-13 11:32:27] 2026-04-13 09:31:36,181 | INFO     | sum of square deviations: 2790287809.7644095
[2026-04-13 11:32:27] 2026-04-13 09:31:36,193 | INFO     | sum of deviations: -11570663915.009615
[2026-04-13 11:32:27] 2026-04-13 09:31:36,193 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,193 | INFO     | mean y: 2322059.144230769
[2026-04-13 11:32:27] 2026-04-13 09:31:36,193 | INFO     | intersect: 2322059.144230769
[2026-04-13 11:32:27] 2026-04-13 09:31:36,194 | INFO     | chi2: 0.8014834473693572
[2026-04-13 11:32:27] 2026-04-13 09:31:36,194 | INFO     | current chi2=0.8014834473693572 (change=65.99873993636564 %)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,194 | INFO     | sum of square deviations: 2593854084.7586155
[2026-04-13 11:32:27] 2026-04-13 09:31:36,195 | INFO     | sum of deviations: -13705784050.482763
[2026-04-13 11:32:27] 2026-04-13 09:31:36,195 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,196 | INFO     | mean y: 2323701.21182266
[2026-04-13 11:32:27] 2026-04-13 09:31:36,196 | INFO     | intersect: 2323701.21182266
[2026-04-13 11:32:27] 2026-04-13 09:31:36,203 | INFO     | chi2: 0.7935726933694647
[2026-04-13 11:32:27] 2026-04-13 09:31:36,203 | INFO     | current chi2=0.7935726933694647 (change=0.9870140207957268 %)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,203 | INFO     | left removable region: 10
[2026-04-13 11:32:27] 2026-04-13 09:31:36,203 | INFO     | sum of square deviations: 2194617807.744788
[2026-04-13 11:32:27] 2026-04-13 09:31:36,205 | INFO     | sum of deviations: -1507182194.1927075
[2026-04-13 11:32:27] 2026-04-13 09:31:36,205 | INFO     | mean x (centered): 0.0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,205 | INFO     | mean y: 2333434.0989583335
[2026-04-13 11:32:27] 2026-04-13 09:31:36,205 | INFO     | intersect: 2333434.0989583335
[2026-04-13 11:32:27] 2026-04-13 09:31:36,205 | INFO     | chi2: 0.008251146370964867
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | current memory leak: -0.69 B/s (using 192 data points, chi2=0.01)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | could have reported an average CPU frequency of 1994 MHz (11 samples)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | ..............................
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | . Timing measurements:
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | . get job = 0 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | . initial setup = 11 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,206 | INFO     | . payload setup = 21 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,207 | INFO     | . stage-in = 0 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,207 | INFO     | . payload execution = 12964 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,207 | INFO     | . stage-out = 1 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,207 | INFO     | . log creation = 0 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,214 | INFO     | ..............................
[2026-04-13 11:32:27] 2026-04-13 09:31:36,409 | INFO     | 
[2026-04-13 11:32:27] 2026-04-13 09:31:36,409 | INFO     | job summary report
[2026-04-13 11:32:27] 2026-04-13 09:31:36,409 | INFO     | --------------------------------------------------
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | PanDA job id: 7083736248
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | task id: 49263191
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | errors: (none)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | pilot state: finished 
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | transexitcode: 0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | exeerrorcode: 0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | exeerrordiag: 
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | exitcode: 0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | exitmsg: OK
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | cpuconsumptiontime: 44427 s
[2026-04-13 11:32:27] 2026-04-13 09:31:36,410 | INFO     | nevents: 400
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | neventsw: 0
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | pid: 907563
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | pgrp: 907563
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | corecount: 4
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | event service: False
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | sizes: {0: 2279906, 1: 2281508, 12990: 2311622, 12992: 2320644, 12995: 2320894}
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | --------------------------------------------------
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | 
[2026-04-13 11:32:27] 2026-04-13 09:31:36,411 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/19
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | job 7083736248 has completed (purged errors)
[2026-04-13 11:32:27] 2026-04-13 09:31:36,484 | INFO     | overall cleanup function is called
[2026-04-13 11:32:27] 2026-04-13 09:31:37,493 | INFO     | --- collectZombieJob: --- 10, [907563]
[2026-04-13 11:32:27] 2026-04-13 09:31:37,493 | INFO     | zombie collector waiting for pid 907563
[2026-04-13 11:32:27] 2026-04-13 09:31:37,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-13 11:32:27] 2026-04-13 09:31:37,494 | INFO     | collected zombie processes
[2026-04-13 11:32:27] 2026-04-13 09:31:37,494 | INFO     | will attempt to kill all subprocesses of pid=907563
[2026-04-13 11:32:27] 2026-04-13 09:31:38,328 | INFO     | process IDs to be killed: [907563] (in reverse order)
[2026-04-13 11:32:27] 2026-04-13 09:31:38,654 | WARNING  | found no corresponding commands to process id(s)
[2026-04-13 11:32:27] 2026-04-13 09:31:38,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-13 11:32:27] 2026-04-13 09:31:38,686 | INFO     | did not find any defunct processes belonging to 907563
[2026-04-13 11:32:27] 2026-04-13 09:31:38,715 | INFO     | did not find any defunct processes belonging to 907563
[2026-04-13 11:32:27] 2026-04-13 09:31:38,715 | INFO     | Ready for new job
[2026-04-13 11:32:27] 2026-04-13 09:31:38,718 | INFO     | **************************************
[2026-04-13 11:32:27] 2026-04-13 09:31:38,718 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-13 11:32:27] 2026-04-13 09:31:38,719 | INFO     | **************************************
[2026-04-13 11:32:27] 2026-04-13 09:31:38,719 | INFO     | 
[2026-04-13 11:32:27] 2026-04-13 09:31:38,728 | INFO     | architecture information:
[2026-04-13 11:32:27] 2026-04-13 09:31:38,728 | INFO     | executing command: cat /etc/os-release
[2026-04-13 11:32:27] 2026-04-13 09:31:38,755 | INFO     | cat /etc/os-release:
[2026-04-13 11:32:27] NAME="CentOS Linux"
[2026-04-13 11:32:27] VERSION="7 (Core)"
[2026-04-13 11:32:27] ID="centos"
[2026-04-13 11:32:27] ID_LIKE="rhel fedora"
[2026-04-13 11:32:27] VERSION_ID="7"
[2026-04-13 11:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-13 11:32:27] ANSI_COLOR="0;31"
[2026-04-13 11:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-13 11:32:27] HOME_URL="https://www.centos.org/"
[2026-04-13 11:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-13 11:32:27] 
[2026-04-13 11:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-13 11:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-13 11:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-13 11:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-13 11:32:27] 
[2026-04-13 11:32:27] 2026-04-13 09:31:38,756 | INFO     | **************************************
[2026-04-13 11:32:27] 2026-04-13 09:31:39,258 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/19
[2026-04-13 11:32:27] 2026-04-13 09:31:39,286 | INFO     | sufficient remaining disk space (241230151680 B)
[2026-04-13 11:32:27] 2026-04-13 09:31:39,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-13 11:32:27] 2026-04-13 09:31:39,287 | INFO     | current server update state: UPDATING_FINAL
[2026-04-13 11:32:27] 2026-04-13 09:31:39,287 | INFO     | update_server=False
[2026-04-13 11:32:27] 2026-04-13 09:31:39,287 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-13 11:32:27] 2026-04-13 09:31:39,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-13 11:32:27] 2026-04-13 09:31:39,443 | INFO     | all payload control threads have been joined
[2026-04-13 11:32:27] 2026-04-13 09:31:39,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:32:27] 2026-04-13 09:31:39,660 | INFO     | aborting loop
[2026-04-13 11:32:27] 2026-04-13 09:31:40,143 | INFO     | all job control threads have been joined
[2026-04-13 11:32:27] 2026-04-13 09:31:40,263 | INFO     | all data control threads have been joined
[2026-04-13 11:32:27] 2026-04-13 09:31:40,292 | INFO     | [job] retrieve thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,448 | INFO     | [payload] control thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,664 | INFO     | [job] job monitor thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,782 | INFO     | [data] copytool_in thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,824 | INFO     | [job] validate thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,853 | INFO     | [payload] validate_pre thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:40,977 | INFO     | [payload] failed_post thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,038 | INFO     | [payload] execute_payloads thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,148 | INFO     | [job] control thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,268 | INFO     | [data] control thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,293 | INFO     | [data] copytool_out thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-13 11:32:27] 2026-04-13 09:31:41,663 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,745 | INFO     | [job] create_data_payload thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,809 | INFO     | [payload] validate_post thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:41,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-13 11:32:27] 2026-04-13 09:31:42,424 | INFO     | [job] queue monitor thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:31:45,978 | INFO     | [data] queue_monitor thread has finished
[2026-04-13 11:32:27] 2026-04-13 09:32:08,788 | INFO     | PID=901615 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-13 11:32:27] 2026-04-13 09:32:08,789 | INFO     | .. there are 23 such processes running
[2026-04-13 11:32:27] 2026-04-13 09:32:08,789 | INFO     | found 0 job(s) in 20 queues
[2026-04-13 11:32:27] 2026-04-13 09:32:08,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-13 11:32:27] 2026-04-13 09:32:08,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-13 11:32:27] 2026-04-13 09:32:21,014 | INFO     | [monitor] cgroup control has ended
[2026-04-13 11:32:27] 2026-04-13 09:32:22,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23228242470720)>', '<ExcThread(monitor, started 23228000245504)>']
[2026-04-13 11:32:27] 2026-04-13 09:32:22,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-13 11:32:27] 2026-04-13 09:32:22,857 | INFO     | [monitor] control thread has ended
[2026-04-13 11:32:27] 2026-04-13 09:32:27,223 | INFO     | all workflow threads have been joined
[2026-04-13 11:32:27] 2026-04-13 09:32:27,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-13 11:32:27] 2026-04-13 09:32:27,224 | INFO     | traces error code: 0
[2026-04-13 11:32:27] 2026-04-13 09:32:27,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-13 11:32:27] 2026-04-13 09:32:27,392 [wrapper] ==== pilot stdout END ====
[2026-04-13 11:32:27] 2026-04-13 09:32:27,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-13 11:32:27] 2026-04-13 09:32:27,399 [wrapper] pilotpid: 901615
[2026-04-13 11:32:27] 2026-04-13 09:32:27,403 [wrapper] Pilot exit status: 0
[2026-04-13 11:32:27] 2026-04-13 09:32:27,419 [wrapper] pandaids: 7083736248
[2026-04-13 11:32:27] 2026-04-13 09:32:27,626 [wrapper] cleanup supervisor_pilot 1290984 901617
[2026-04-13 11:32:27] 2026-04-13 09:32:27,631 [wrapper] Test setup, not cleaning
[2026-04-13 11:32:27] 2026-04-13 09:32:27,635 [wrapper] apfmon messages muted
[2026-04-13 11:32:27] 2026-04-13 09:32:27,639 [wrapper] ==== wrapper stdout END ====
[2026-04-13 11:32:27] 2026-04-13 09:32:27,643 [wrapper] ==== wrapper stderr END ====
[2026-04-13 11:32:27]  *** Error codes and diagnostics ***
[2026-04-13 11:32:27]     "exeErrorCode": 0,
[2026-04-13 11:32:27]     "pilotErrorCode": 0,
[2026-04-13 11:32:27]  *** Listing of results directory ***
[2026-04-13 11:32:27] total 412140
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc    644190 Apr 10 08:21 pilot3.tar.gz
[2026-04-13 11:32:27] -rwx------. 1 boinc boinc     36322 Apr 10 08:22 runpilot2-wrapper.sh
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc      5094 Apr 10 08:27 queuedata.json
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc       100 Apr 13 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-13 11:32:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 13 07:17 run_atlas
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc       105 Apr 13 07:17 job.xml
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc 222281544 Apr 13 07:54 EVNT.49263189._000639.pool.root.1
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc      6609 Apr 13 07:54 init_data.xml
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc     15665 Apr 13 07:54 start_atlas.sh
[2026-04-13 11:32:27] drwxrwx--x. 2 boinc boinc      4096 Apr 13 07:54 shared
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc    656925 Apr 13 07:54 input.tar.gz
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc         0 Apr 13 07:54 boinc_lockfile
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc      2576 Apr 13 07:54 pandaJob.out
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc    997767 Apr 13 07:54 agis_schedconf.cvmfs.json
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc       443 Apr 13 07:54 workernode_map.json
[2026-04-13 11:32:27] drwx------. 5 boinc boinc      4096 Apr 13 07:54 pilot3
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc 192876067 Apr 13 11:30 HITS.49263191._036233.pool.root.1
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc       487 Apr 13 11:31 boinc_task_state.xml
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc        95 Apr 13 11:31 pilot_heartbeat.json
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc      1027 Apr 13 11:31 memory_monitor_summary.json
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc   1511579 Apr 13 11:31 agis_ddmendpoints.agis.ALL.json
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc    307142 Apr 13 11:31 log.49263191._036233.job.log.tgz.1
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc      6372 Apr 13 11:31 heartbeat_new.json
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc      6263 Apr 13 11:31 heartbeat.json
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc        27 Apr 13 11:32 wrapper_checkpoint.txt
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc      8192 Apr 13 11:32 boinc_mmap_file
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc      4830 Apr 13 11:32 pilotlog.txt
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc   1103342 Apr 13 11:32 log.49263191._036233.job.log.1
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc       357 Apr 13 11:32 output.list
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc       410 Apr 13 11:32 runtime_log
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc   1423360 Apr 13 11:32 result.tar.gz
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc      8844 Apr 13 11:32 runtime_log.err
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc       666 Apr 13 11:32 9712ed4b694c.diag
[2026-04-13 11:32:27] -rw-r--r--. 1 boinc boinc     20858 Apr 13 11:32 stderr.txt
[2026-04-13 11:32:27] HITS file was successfully produced:
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc 192876067 Apr 13 11:30 shared/HITS.pool.root.1
[2026-04-13 11:32:27]  *** Contents of shared directory: ***
[2026-04-13 11:32:27] total 407488
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc 222281544 Apr 13 07:54 ATLAS.root_0
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc     15665 Apr 13 07:54 start_atlas.sh
[2026-04-13 11:32:27] -rw-r--r--. 2 boinc boinc    656925 Apr 13 07:54 input.tar.gz
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc 192876067 Apr 13 11:30 HITS.pool.root.1
[2026-04-13 11:32:27] -rw-------. 1 boinc boinc   1423360 Apr 13 11:32 result.tar.gz
11:32:29 (897492): run_atlas exited; CPU time 45380.288377
11:32:29 (897492): called boinc_finish(0)

</stderr_txt>
]]>

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