Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:36 (3857453): wrapper (7.7.26015): starting
21:27:36 (3857453): wrapper: running run_atlas (--nthreads 2)
[2026-04-10 21:27:36] Arguments: --nthreads 2
[2026-04-10 21:27:36] Threads: 2
[2026-04-10 21:27:36] Checking for CVMFS
[2026-04-10 21:27:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 21:27:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 21:27:37] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 21:27:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 21:27:37] 2.9.2.0 3735197 1177 55888 158313 1 50 19797157 36864001 0 130560 0 501294 99.981 48089 17679 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-10 21:27:37] CVMFS is ok
[2026-04-10 21:27:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 21:27:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 21:27:37] Further information can be found at the LHC@home message board.
[2026-04-10 21:27:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 21:27:37] Checking for apptainer binary...
[2026-04-10 21:27:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-10 21:27:37] Running /usr/bin/apptainer --version
[2026-04-10 21:27:37] apptainer version 1.4.1-1.1
[2026-04-10 21:27:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 21:27:37] magicA244
[2026-04-10 21:27:37] apptainer works
[2026-04-10 21:27:37] Set ATHENA_PROC_NUMBER=2
[2026-04-10 21:27:37] Set ATHENA_CORE_NUMBER=2
[2026-04-10 21:27:37] Starting ATLAS job with PandaID=7083688795
[2026-04-10 21:27:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 23:42:04]  *** The last 200 lines of the pilot log: ***
[2026-04-10 23:42:04] 2026-04-10 21:41:20,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 23:42:04] 2026-04-10 21:41:20,366 | INFO     | aborting loop
[2026-04-10 23:42:04] 2026-04-10 21:41:20,438 | INFO     | all job control threads have been joined
[2026-04-10 23:42:04] 2026-04-10 21:41:20,519 | INFO     | all data control threads have been joined
[2026-04-10 23:42:04] 2026-04-10 21:41:20,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 23:42:04] 2026-04-10 21:41:21,366 | INFO     | [job] queue monitor thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,371 | INFO     | [job] retrieve thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,371 | INFO     | [job] job monitor thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,423 | INFO     | all payload control threads have been joined
[2026-04-10 23:42:04] 2026-04-10 21:41:21,443 | INFO     | [job] control thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,524 | INFO     | [data] control thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,574 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:21,786 | INFO     | [payload] failed_post thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,318 | INFO     | [payload] validate_post thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,371 | INFO     | [job] validate thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,428 | INFO     | [payload] control thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,432 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,461 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,551 | INFO     | [data] copytool_in thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:22,754 | INFO     | [data] copytool_out thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:24,371 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:30,600 | INFO     | job.realtimelogging is not enabled
[2026-04-10 23:42:04] 2026-04-10 21:41:31,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 23:42:04] 2026-04-10 21:41:51,419 | INFO     | PID=3861480 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-10 23:42:04] 2026-04-10 21:41:51,419 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 23:42:04] 2026-04-10 21:41:51,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 23:42:04] 2026-04-10 21:41:51,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 23:42:04] 2026-04-10 21:41:58,166 | INFO     | [monitor] cgroup control has ended
[2026-04-10 23:42:04] 2026-04-10 21:41:59,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285644240704)>', '<ExcThread(monitor, started 140284637738752)>']
[2026-04-10 23:42:04] 2026-04-10 21:42:00,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 23:42:04] 2026-04-10 21:42:00,460 | INFO     | [monitor] control thread has ended
[2026-04-10 23:42:04] 2026-04-10 21:42:04,628 | INFO     | all workflow threads have been joined
[2026-04-10 23:42:04] 2026-04-10 21:42:04,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 23:42:04] 2026-04-10 21:42:04,628 | INFO     | traces error code: 0
[2026-04-10 23:42:04] 2026-04-10 21:42:04,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 23:42:04] 2026-04-10 21:42:04,671 [wrapper] ==== pilot stdout END ====
[2026-04-10 23:42:04] 2026-04-10 21:42:04,674 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 23:42:04] 2026-04-10 21:42:04,676 [wrapper] pilotpid: 3861480
[2026-04-10 23:42:04] 2026-04-10 21:42:04,678 [wrapper] Pilot exit status: 0
[2026-04-10 23:42:04] 2026-04-10 21:42:04,684 [wrapper] pandaids: 7083688795
[2026-04-10 23:42:04] 2026-04-10 21:42:04,697 [wrapper] cleanup supervisor_pilot 3870682 3861481
[2026-04-10 23:42:04] 2026-04-10 21:42:04,700 [wrapper] Test setup, not cleaning
[2026-04-10 23:42:04] 2026-04-10 21:42:04,702 [wrapper] apfmon messages muted
[2026-04-10 23:42:04] 2026-04-10 21:42:04,704 [wrapper] ==== wrapper stdout END ====
[2026-04-10 23:42:04] 2026-04-10 21:42:04,707 [wrapper] ==== wrapper stderr END ====
[2026-04-10 23:42:04]  *** Error codes and diagnostics ***
[2026-04-10 23:42:04]     "exeErrorCode": 0,
[2026-04-10 23:42:04]     "pilotErrorCode": 0,
[2026-04-10 23:42:04]  *** Listing of results directory ***
[2026-04-10 23:42:04] total 420048
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc    644190 Apr 10 08:21 pilot3.tar.gz
[2026-04-10 23:42:04] -rwx------ 1 boinc boinc     36322 Apr 10 08:22 runpilot2-wrapper.sh
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      5094 Apr 10 08:27 queuedata.json
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc       100 Apr 10 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 23:42:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 10 21:27 run_atlas
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc       105 Apr 10 21:27 job.xml
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc 222158377 Apr 10 21:27 EVNT.49263189._000632.pool.root.1
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc    656929 Apr 10 21:27 input.tar.gz
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc     15665 Apr 10 21:27 start_atlas.sh
[2026-04-10 23:42:04] drwxrwx--x 2 boinc boinc      4096 Apr 10 21:27 shared
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc         0 Apr 10 21:27 boinc_setup_complete
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      6124 Apr 10 21:27 init_data.xml
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc         0 Apr 10 21:27 boinc_lockfile
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      2577 Apr 10 21:27 pandaJob.out
[2026-04-10 23:42:04] -rw------- 1 boinc boinc    997868 Apr 10 21:27 agis_schedconf.cvmfs.json
[2026-04-10 23:42:04] -rw------- 1 boinc boinc   1511579 Apr 10 21:27 agis_ddmendpoints.agis.ALL.json
[2026-04-10 23:42:04] -rw------- 1 boinc boinc       422 Apr 10 21:27 workernode_map.json
[2026-04-10 23:42:04] drwx------ 5 boinc boinc      4096 Apr 10 21:27 pilot3
[2026-04-10 23:42:04] -rw------- 1 boinc boinc 201943732 Apr 10 23:40 HITS.49263191._036067.pool.root.1
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc       487 Apr 10 23:41 boinc_task_state.xml
[2026-04-10 23:42:04] -rw------- 1 boinc boinc      1013 Apr 10 23:41 memory_monitor_summary.json
[2026-04-10 23:42:04] -rw------- 1 boinc boinc    240556 Apr 10 23:41 log.49263191._036067.job.log.tgz.1
[2026-04-10 23:42:04] -rw------- 1 boinc boinc        95 Apr 10 23:41 pilot_heartbeat.json
[2026-04-10 23:42:04] -rw------- 1 boinc boinc      6326 Apr 10 23:41 heartbeat_new.json
[2026-04-10 23:42:04] -rw------- 1 boinc boinc      6217 Apr 10 23:41 heartbeat.json
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      8192 Apr 10 23:42 boinc_mmap_file
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc        27 Apr 10 23:42 wrapper_checkpoint.txt
[2026-04-10 23:42:04] -rw------- 1 boinc boinc      4819 Apr 10 23:42 pilotlog.txt
[2026-04-10 23:42:04] -rw------- 1 boinc boinc    757213 Apr 10 23:42 log.49263191._036067.job.log.1
[2026-04-10 23:42:04] -rw------- 1 boinc boinc       357 Apr 10 23:42 output.list
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc       410 Apr 10 23:42 runtime_log
[2026-04-10 23:42:04] -rw------- 1 boinc boinc   1013760 Apr 10 23:42 result.tar.gz
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      8533 Apr 10 23:42 runtime_log.err
[2026-04-10 23:42:04] -rw------- 1 boinc boinc       662 Apr 10 23:42 9708746c0a49.diag
[2026-04-10 23:42:04] -rw-r--r-- 1 boinc boinc      6935 Apr 10 23:42 stderr.txt
[2026-04-10 23:42:04] HITS file was successfully produced:
[2026-04-10 23:42:04] -rw------- 1 boinc boinc 201943732 Apr 10 23:40 shared/HITS.pool.root.1
[2026-04-10 23:42:04]  *** Contents of shared directory: ***
[2026-04-10 23:42:04] total 415816
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc 222158377 Apr 10 21:27 ATLAS.root_0
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc    656929 Apr 10 21:27 input.tar.gz
[2026-04-10 23:42:04] -rw-r--r-- 2 boinc boinc     15665 Apr 10 21:27 start_atlas.sh
[2026-04-10 23:42:04] -rw------- 1 boinc boinc 201943732 Apr 10 23:40 HITS.pool.root.1
[2026-04-10 23:42:04] -rw------- 1 boinc boinc   1013760 Apr 10 23:42 result.tar.gz
23:42:05 (3857453): run_atlas exited; CPU time 15413.237797
23:42:05 (3857453): called boinc_finish(0)

</stderr_txt>
]]>

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