Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-10 21:09:22 (14528): vboxwrapper version 26210
2026-04-10 21:09:22 (14528): BOINC client version: 8.2.8
2026-04-10 21:09:23 (14528): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-10 21:09:24 (14528): Successfully copied 'init_data.xml' to the shared directory.
2026-04-10 21:09:24 (14528): Create VM. (boinc_899146af2bfbd438, slot#1)
2026-04-10 21:09:24 (14528): Setting Memory Size for VM. (4300MB)
2026-04-10 21:09:25 (14528): Setting CPU Count for VM. (3)
2026-04-10 21:09:25 (14528): Setting Chipset Options for VM.
2026-04-10 21:09:25 (14528): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-10 21:09:25 (14528): Setting Boot Options for VM.
2026-04-10 21:09:26 (14528): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-10 21:09:26 (14528): Enabling VM Network Access.
2026-04-10 21:09:26 (14528): Disabling USB Support for VM.
2026-04-10 21:09:27 (14528): Disabling COM Port Support for VM.
2026-04-10 21:09:27 (14528): Disabling LPT Port Support for VM.
2026-04-10 21:09:27 (14528): Disabling Audio Support for VM.
2026-04-10 21:09:27 (14528): Disabling Clipboard Support for VM.
2026-04-10 21:09:28 (14528): Disabling Drag and Drop Support for VM.
2026-04-10 21:09:28 (14528): Adding storage controller(s) to VM.
2026-04-10 21:09:28 (14528): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-10 21:09:30 (14528): Adding VirtualBox Guest Additions to VM.
2026-04-10 21:09:31 (14528): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-10 21:09:31 (14528): forwarding host port 55382 to guest port 80
2026-04-10 21:09:31 (14528): Enabling remote desktop for VM.
2026-04-10 21:09:31 (14528): Required extension pack not installed, remote desktop not enabled.
2026-04-10 21:09:31 (14528): Enabling shared directory for VM.
2026-04-10 21:09:32 (14528): Starting VM using VBoxManage interface. (boinc_899146af2bfbd438, slot#1)
2026-04-10 21:09:37 (14528): Successfully started VM. (PID = '10780')
2026-04-10 21:09:37 (14528): Reporting VM Process ID to BOINC.
2026-04-10 21:09:37 (14528): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-10 21:09:37 (14528): Guest Log: CPUID EDX: 0x178bfbff
2026-04-10 21:09:37 (14528): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-10 21:09:37 (14528): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-10 21:09:37 (14528): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-10 21:09:37 (14528): Detected: Web Application Enabled (http://localhost:55382)
2026-04-10 21:09:37 (14528): Preference change detected
2026-04-10 21:09:37 (14528): Setting CPU throttle for VM. (60%)
2026-04-10 21:09:37 (14528): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 21:09:39 (14528): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-10 21:09:39 (14528): Guest Log: BIOS: Booting from Hard Disk...
2026-04-10 21:09:42 (14528): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-10 21:09:42 (14528): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-10 21:09:42 (14528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-10 21:09:48 (14528): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-10 21:09:48 (14528): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-10 21:09:55 (14528): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000113 main     Log opened 2026-04-10T21:09:53.510931000Z
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000195 main     OS Product: Linux
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000215 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000249 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000249 main     Process ID: 1290
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000249 main     Package type: LINUX_64BITS_GENERIC
2026-04-10 21:09:55 (14528): Guest Log: 00:00:00.000857 main     5.2.32 r132073 started. Verbose level = 0
2026-04-10 21:09:55 (14528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-10 21:09:55 (14528): Guest Log: [INFO] Mounting shared directory
2026-04-10 21:09:55 (14528): Guest Log: [INFO] Checking for init_data.xml
2026-04-10 21:10:05 (14528): Guest Log: 00:00:10.002849 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 835 389 000ns (GuestNow=1 775 823 004 677 121 000 ns GuestLast=1 775 855 393 512 510 000 ns fSetTimeLastLoop=true )
2026-04-10 21:10:16 (14528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-10 21:10:16 (14528): Guest Log: [INFO] Detected branch: prod
2026-04-10 21:10:17 (14528): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-10 21:10:17 (14528): Guest Log: Copying input files
2026-04-10 21:10:18 (14528): Guest Log: Copied input files into RunAtlas.
2026-04-10 21:10:18 (14528): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-10 21:10:18 (14528): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-10 21:10:18 (14528): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-10 21:10:18 (14528): Guest Log: Further information can be found at the LHC@home message board.
2026-04-10 21:10:36 (14528): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-10 21:10:37 (14528): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-10 21:10:37 (14528): Guest Log: 2.6.3.0 1585 0 32040 158298 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-10 21:10:37 (14528): Guest Log: copied the webapp to /var/www
2026-04-10 21:10:37 (14528): Guest Log: ATHENA_PROC_NUMBER=3
2026-04-10 21:10:37 (14528): Guest Log: ATHENA_CORE_NUMBER=3
2026-04-10 21:10:39 (14528): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-10 21:10:39 (14528): Guest Log:  *** Starting ATLAS job. (PandaID=7072875638 taskID=49263191) ***
2026-04-10 22:00:13 (14528): VM state change detected. (old = 'running', new = 'paused')
2026-04-10 22:00:33 (14528): VM state change detected. (old = 'paused', new = 'running')
2026-04-10 22:50:01 (14528): Status Report: Elapsed Time: '6000.000000'
2026-04-10 22:50:01 (14528): Status Report: CPU Time: '9780.031250'
2026-04-11 00:30:04 (14528): Status Report: Elapsed Time: '12000.000000'
2026-04-11 00:30:04 (14528): Status Report: CPU Time: '20638.203125'
2026-04-11 00:39:10 (14528): Guest Log:  *** Job finished ***
2026-04-11 00:39:10 (14528): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:18,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:18,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:40,376 | INFO     | [monitor] cgroup control has ended
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:41,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233503418176)>', '<ExcThread(monitor, started 140232603191040)>']
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:42,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:42,187 | INFO     | [monitor] control thread has ended
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,617 | INFO     | all workflow threads have been joined
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,617 | INFO     | end of generic workflow (traces error code: 0)
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,617 | INFO     | traces error code: 0
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,680 [wrapper] ==== pilot stdout END ====
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,683 [wrapper] ==== wrapper stdout RESUME ====
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,686 [wrapper] pilotpid: 5988
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,690 [wrapper] Pilot exit status: 0
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,746 [wrapper] pandaids: 7072875638
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,767 [wrapper] cleanup supervisor_pilot 27016 5989
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,771 [wrapper] Test setup, not cleaning
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,775 [wrapper] apfmon messages muted
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,778 [wrapper] ==== wrapper stdout END ====
2026-04-11 00:39:10 (14528): Guest Log: 2026-04-10 15:38:46,781 [wrapper] ==== wrapper stderr END ====
2026-04-11 00:39:10 (14528): Guest Log:  *** Error codes and diagnostics ***
2026-04-11 00:39:10 (14528): Guest Log:     "exeErrorCode": 0,
2026-04-11 00:39:10 (14528): Guest Log:     "pilotErrorCode": 0,
2026-04-11 00:39:10 (14528): Guest Log:  *** Listing of results directory ***
2026-04-11 00:39:10 (14528): Guest Log: total 193400
2026-04-11 00:39:10 (14528): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 31 20:56 runpilot2-wrapper.sh
2026-04-11 00:39:10 (14528): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 10 05:14 pilot3.tar.gz
2026-04-11 00:39:10 (14528): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 10 05:17 queuedata.json
2026-04-11 00:39:10 (14528): Guest Log: -rwxr-xr-x. 1 atlas atlas      8519 Apr 10 12:10 init_data.xml
2026-04-11 00:39:10 (14528): Guest Log: -rwxr-xr-x. 1 atlas atlas    656934 Apr 10 12:10 input.tar.gz
2026-04-11 00:39:10 (14528): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 10 12:10 start_atlas.sh
2026-04-11 00:39:10 (14528): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 10 12:10 EVNT.49263189._000526.pool.root.1 -> /data/./ATLAS.root_0
2026-04-11 00:39:10 (14528): Guest Log: -rw-r--r--. 1 atlas atlas      2577 Apr 10 12:10 pandaJob.out
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas    997884 Apr 10 12:13 agis_schedconf.cvmfs.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas       429 Apr 10 12:13 workernode_map.json
2026-04-11 00:39:10 (14528): Guest Log: drwx------. 5 atlas atlas      4096 Apr 10 12:13 pilot3
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas 191265034 Apr 10 15:36 HITS.49263191._013138.pool.root.1
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 10 15:37 memory_monitor_summary.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 10 15:37 agis_ddmendpoints.agis.ALL.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas    296239 Apr 10 15:37 log.49263191._013138.job.log.tgz.1
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas      6363 Apr 10 15:37 heartbeat_new.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas      6254 Apr 10 15:37 heartbeat.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas        95 Apr 10 15:38 pilot_heartbeat.json
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas      4800 Apr 10 15:38 pilotlog.txt
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas   1097350 Apr 10 15:38 log.49263191._013138.job.log.1
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas       357 Apr 10 15:38 output.list
2026-04-11 00:39:10 (14528): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 10 15:38 runtime_log
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas   1413120 Apr 10 15:38 result.tar.gz
2026-04-11 00:39:10 (14528): Guest Log: -rw-r--r--. 1 atlas atlas      8407 Apr 10 15:38 runtime_log.err
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas       668 Apr 10 15:38 35026a8ec45b.diag
2026-04-11 00:39:10 (14528): Guest Log: Looking for outputfile HITS.49263191._013138.pool.root.1
2026-04-11 00:39:10 (14528): Guest Log: HITS file was successfully produced
2026-04-11 00:39:10 (14528): Guest Log: -rw-------. 1 atlas atlas 191265034 Apr 10 15:36 /home/atlas/RunAtlas/HITS.49263191._013138.pool.root.1
2026-04-11 00:39:11 (14528): Guest Log: Successfully finished the ATLAS job!
2026-04-11 00:39:11 (14528): Guest Log: Copying the results back to the shared directory!
2026-04-11 00:39:11 (14528): Guest Log:  *** Contents of shared directory: ***
2026-04-11 00:39:11 (14528): Guest Log: total 407376
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root 223780978 Apr 10 12:09 ATLAS.root_0
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root 191265034 Apr 10  2026 HITS.pool.root.1
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root      8519 Apr 10 12:09 init_data.xml
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root    656934 Apr 10 08:44 input.tar.gz
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root   1413120 Apr 10  2026 result.tar.gz
2026-04-11 00:39:11 (14528): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 10 08:44 start_atlas.sh
2026-04-11 00:39:11 (14528): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-11 00:39:11 (14528): VM Completion File Detected.
2026-04-11 00:39:11 (14528): Powering off VM.
2026-04-11 00:39:12 (14528): Successfully stopped VM.
2026-04-11 00:39:12 (14528): Deregistering VM. (boinc_899146af2bfbd438, slot#1)
2026-04-11 00:39:12 (14528): Removing network bandwidth throttle group from VM.
2026-04-11 00:39:12 (14528): Removing VM from VirtualBox.
2026-04-11 00:39:17 (14528): called boinc_finish(0)

</stderr_txt>
]]>

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