Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:00 (1088754): wrapper (7.7.26015): starting
10:01:00 (1088754): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 10:01:00] Arguments: --nthreads 4
[2026-04-11 10:01:00] Threads: 4
[2026-04-11 10:01:00] Checking for CVMFS
[2026-04-11 10:01:00] No cvmfs_config command found, will try listing directly
[2026-04-11 10:01:00] CVMFS is ok
[2026-04-11 10:01:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 10:01:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 10:01:00] Further information can be found at the LHC@home message board.
[2026-04-11 10:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 10:01:00] Checking for apptainer binary...
[2026-04-11 10:01:00] which: no apptainer in ((null))
[2026-04-11 10:01:00] apptainer is not installed, using version from CVMFS
[2026-04-11 10:01:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 10:01:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-04-11 10:01:00] apptainer works
[2026-04-11 10:01:00] Set ATHENA_PROC_NUMBER=4
[2026-04-11 10:01:00] Set ATHENA_CORE_NUMBER=4
[2026-04-11 10:01:00] Starting ATLAS job with PandaID=7083316570
[2026-04-11 10:01:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 13:16:10]  *** The last 200 lines of the pilot log: ***
[2026-04-11 13:16:10] 2026-04-11 11:08:48,359 | INFO     | chi2: 1.3449440054874
[2026-04-11 13:16:10] 2026-04-11 11:08:48,360 | INFO     | sum of square deviations: 1778377530.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,361 | INFO     | sum of deviations: 24714960812.000004
[2026-04-11 13:16:10] 2026-04-11 11:08:48,361 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,361 | INFO     | mean y: 2311652.413407821
[2026-04-11 13:16:10] 2026-04-11 11:08:48,361 | INFO     | intersect: 2311652.413407821
[2026-04-11 13:16:10] 2026-04-11 11:08:48,362 | INFO     | chi2: 1.3458367014094865
[2026-04-11 13:16:10] 2026-04-11 11:08:48,362 | INFO     | current chi2=1.3458367014094865 (change=-0.06637420728627355 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,362 | INFO     | right removable region: 178
[2026-04-11 13:16:10] 2026-04-11 11:08:48,362 | INFO     | sum of square deviations: 1778377530.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,363 | INFO     | sum of deviations: 1824319496.9999995
[2026-04-11 13:16:10] 2026-04-11 11:08:48,363 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,363 | INFO     | mean y: 2335947.089385475
[2026-04-11 13:16:10] 2026-04-11 11:08:48,364 | INFO     | intersect: 2335947.089385475
[2026-04-11 13:16:10] 2026-04-11 11:08:48,364 | INFO     | chi2: 0.009115240187020463
[2026-04-11 13:16:10] 2026-04-11 11:08:48,364 | INFO     | current chi2=0.009115240187020463 (change=99.32225875948515 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,369 | INFO     | sum of square deviations: 1633472487.5
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | sum of deviations: 2810518666.5000005
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | mean y: 2334893.8908045976
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | intersect: 2334893.8908045976
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | chi2: 0.0047373881130449115
[2026-04-11 13:16:10] 2026-04-11 11:08:48,371 | INFO     | current chi2=0.0047373881130449115 (change=48.02783014110085 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,372 | INFO     | sum of square deviations: 1496660620.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,373 | INFO     | sum of deviations: 3983413094.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,373 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,373 | INFO     | mean y: 2333599.0355029586
[2026-04-11 13:16:10] 2026-04-11 11:08:48,373 | INFO     | intersect: 2333599.0355029586
[2026-04-11 13:16:10] 2026-04-11 11:08:48,373 | INFO     | chi2: 0.0003729359523076335
[2026-04-11 13:16:10] 2026-04-11 11:08:48,374 | INFO     | current chi2=0.0003729359523076335 (change=92.12781508695237 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,374 | INFO     | sum of square deviations: 1367709365.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,375 | INFO     | sum of deviations: 3435541960.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,375 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,375 | INFO     | mean y: 2334244.2682926827
[2026-04-11 13:16:10] 2026-04-11 11:08:48,375 | INFO     | intersect: 2334244.2682926827
[2026-04-11 13:16:10] 2026-04-11 11:08:48,375 | INFO     | chi2: 0.00027310823905342103
[2026-04-11 13:16:10] 2026-04-11 11:08:48,376 | INFO     | current chi2=0.00027310823905342103 (change=26.768058331867383 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,376 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,377 | INFO     | sum of deviations: 3049234938.0000052
[2026-04-11 13:16:10] 2026-04-11 11:08:48,377 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,377 | INFO     | mean y: 2334730.0754716983
[2026-04-11 13:16:10] 2026-04-11 11:08:48,377 | INFO     | intersect: 2334730.0754716983
[2026-04-11 13:16:10] 2026-04-11 11:08:48,377 | INFO     | chi2: 0.0002618065805786377
[2026-04-11 13:16:10] 2026-04-11 11:08:48,378 | INFO     | current chi2=0.0002618065805786377 (change=4.138160940861509 %)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,378 | INFO     | left removable region: 25
[2026-04-11 13:16:10] 2026-04-11 11:08:48,378 | INFO     | sum of square deviations: 1110539892.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,379 | INFO     | sum of deviations: 2738891399.0000005
[2026-04-11 13:16:10] 2026-04-11 11:08:48,379 | INFO     | mean x (centered): 0.0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,379 | INFO     | mean y: 2334312.1307189544
[2026-04-11 13:16:10] 2026-04-11 11:08:48,379 | INFO     | intersect: 2334312.1307189544
[2026-04-11 13:16:10] 2026-04-11 11:08:48,380 | INFO     | chi2: 0.0002609743125967965
[2026-04-11 13:16:10] 2026-04-11 11:08:48,380 | INFO     | current memory leak: 2.47 B/s (using 153 data points, chi2=0.00)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,380 | INFO     | could have reported an average CPU frequency of 2638 MHz (10 samples)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,380 | INFO     | ..............................
[2026-04-11 13:16:10] 2026-04-11 11:08:48,380 | INFO     | . Timing measurements:
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . get job = 0 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . initial setup = 6 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . payload setup = 10 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . stage-in = 0 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . payload execution = 11220 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . stage-out = 1 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | . log creation = 0 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,381 | INFO     | ..............................
[2026-04-11 13:16:10] 2026-04-11 11:08:48,512 | INFO     | 
[2026-04-11 13:16:10] 2026-04-11 11:08:48,513 | INFO     | job summary report
[2026-04-11 13:16:10] 2026-04-11 11:08:48,513 | INFO     | --------------------------------------------------
[2026-04-11 13:16:10] 2026-04-11 11:08:48,513 | INFO     | PanDA job id: 7083316570
[2026-04-11 13:16:10] 2026-04-11 11:08:48,513 | INFO     | task id: 49263200
[2026-04-11 13:16:10] 2026-04-11 11:08:48,516 | INFO     | errors: (none)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | pilot state: finished 
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | transexitcode: 0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | exeerrorcode: 0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | exeerrordiag: 
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | exitcode: 0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | exitmsg: OK
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | cpuconsumptiontime: 42951 s
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | nevents: 400
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | neventsw: 0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,528 | INFO     | pid: 1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:48,530 | INFO     | pgrp: 1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:48,530 | INFO     | corecount: 4
[2026-04-11 13:16:10] 2026-04-11 11:08:48,531 | INFO     | event service: False
[2026-04-11 13:16:10] 2026-04-11 11:08:48,531 | INFO     | sizes: {0: 2279010, 1: 2281507, 12: 2281507, 11234: 2310673, 11235: 2319693, 11238: 2320071}
[2026-04-11 13:16:10] 2026-04-11 11:08:48,531 | INFO     | --------------------------------------------------
[2026-04-11 13:16:10] 2026-04-11 11:08:48,531 | INFO     | 
[2026-04-11 13:16:10] 2026-04-11 11:08:48,531 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,565 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 13:16:10] 2026-04-11 11:08:48,566 | INFO     | job 7083316570 has completed (purged errors)
[2026-04-11 13:16:10] 2026-04-11 11:08:48,566 | INFO     | overall cleanup function is called
[2026-04-11 13:16:10] 2026-04-11 11:08:48,861 | INFO     | number of running child processes to parent process 1098286: 1
[2026-04-11 13:16:10] 2026-04-11 11:08:48,861 | INFO     | maximum number of monitored processes: 6
[2026-04-11 13:16:10] 2026-04-11 11:08:48,861 | INFO     | aborting job monitoring since job object (job id=7083316570) has expired
[2026-04-11 13:16:10] 2026-04-11 11:08:49,573 | INFO     | --- collectZombieJob: --- 10, [1098286]
[2026-04-11 13:16:10] 2026-04-11 11:08:49,573 | INFO     | zombie collector waiting for pid 1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:49,574 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 13:16:10] 2026-04-11 11:08:49,574 | INFO     | collected zombie processes
[2026-04-11 13:16:10] 2026-04-11 11:08:49,574 | INFO     | will attempt to kill all subprocesses of pid=1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:49,952 | INFO     | process IDs to be killed: [1098286] (in reverse order)
[2026-04-11 13:16:10] 2026-04-11 11:08:50,075 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 13:16:10] 2026-04-11 11:08:50,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 13:16:10] 2026-04-11 11:08:50,088 | INFO     | did not find any defunct processes belonging to 1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:50,099 | INFO     | did not find any defunct processes belonging to 1098286
[2026-04-11 13:16:10] 2026-04-11 11:08:50,100 | INFO     | Ready for new job
[2026-04-11 13:16:10] 2026-04-11 11:08:50,102 | INFO     | **************************************
[2026-04-11 13:16:10] 2026-04-11 11:08:50,102 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 13:16:10] 2026-04-11 11:08:50,102 | INFO     | **************************************
[2026-04-11 13:16:10] 2026-04-11 11:08:50,102 | INFO     | 
[2026-04-11 13:16:10] 2026-04-11 11:08:50,106 | INFO     | architecture information:
[2026-04-11 13:16:10] 2026-04-11 11:08:50,106 | INFO     | executing command: cat /etc/os-release
[2026-04-11 13:16:10] 2026-04-11 11:08:50,121 | INFO     | cat /etc/os-release:
[2026-04-11 13:16:10] NAME="CentOS Linux"
[2026-04-11 13:16:10] VERSION="7 (Core)"
[2026-04-11 13:16:10] ID="centos"
[2026-04-11 13:16:10] ID_LIKE="rhel fedora"
[2026-04-11 13:16:10] VERSION_ID="7"
[2026-04-11 13:16:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 13:16:10] ANSI_COLOR="0;31"
[2026-04-11 13:16:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 13:16:10] HOME_URL="https://www.centos.org/"
[2026-04-11 13:16:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 13:16:10] 
[2026-04-11 13:16:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 13:16:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 13:16:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 13:16:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 13:16:10] 
[2026-04-11 13:16:10] 2026-04-11 11:08:50,122 | INFO     | **************************************
[2026-04-11 13:16:10] 2026-04-11 11:08:50,624 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-04-11 13:16:10] 2026-04-11 11:08:50,643 | INFO     | sufficient remaining disk space (28898754560 B)
[2026-04-11 13:16:10] 2026-04-11 11:08:50,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 13:16:10] 2026-04-11 11:08:50,644 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 13:16:10] 2026-04-11 11:08:50,644 | INFO     | update_server=False
[2026-04-11 13:16:10] 2026-04-11 11:08:50,644 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 13:16:10] 2026-04-11 11:08:50,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 13:16:10] 2026-04-11 11:08:50,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 13:16:10] 2026-04-11 11:08:50,645 | INFO     | aborting loop
[2026-04-11 13:16:10] 2026-04-11 11:08:50,671 | INFO     | all job control threads have been joined
[2026-04-11 13:16:10] 2026-04-11 11:08:50,879 | INFO     | all payload control threads have been joined
[2026-04-11 13:16:10] 2026-04-11 11:08:50,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 13:16:10] 2026-04-11 11:08:51,378 | INFO     | all data control threads have been joined
[2026-04-11 13:16:10] 2026-04-11 11:08:51,649 | INFO     | [job] retrieve thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:51,650 | INFO     | [job] job monitor thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:51,676 | INFO     | [job] control thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:51,745 | INFO     | [data] copytool_in thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:51,884 | INFO     | [payload] control thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,145 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,383 | INFO     | [data] control thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,424 | INFO     | [payload] failed_post thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,449 | INFO     | [job] validate thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,676 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,979 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:52,990 | INFO     | [data] copytool_out thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:53,050 | INFO     | [payload] validate_post thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:53,066 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:53,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 13:16:10] 2026-04-11 11:08:54,526 | INFO     | [job] queue monitor thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:08:54,649 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 13:16:10] 2026-04-11 11:09:21,937 | INFO     | PID=1093435 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-11 13:16:10] 2026-04-11 11:09:21,937 | INFO     | .. there are 11 such processes running
[2026-04-11 13:16:10] 2026-04-11 11:09:21,937 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 13:16:10] 2026-04-11 11:09:21,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 13:16:10] 2026-04-11 11:09:21,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 13:16:10] 2026-04-11 11:09:36,373 | INFO     | [monitor] cgroup control has ended
[2026-04-11 13:16:10] 2026-04-11 11:09:37,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22717101545280)>', '<ExcThread(monitor, started 22716861392640)>']
[2026-04-11 13:16:10] 2026-04-11 11:09:38,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 13:16:10] 2026-04-11 11:09:38,018 | INFO     | [monitor] control thread has ended
[2026-04-11 13:16:10] 2026-04-11 11:09:42,090 | INFO     | all workflow threads have been joined
[2026-04-11 13:16:10] 2026-04-11 11:09:42,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 13:16:10] 2026-04-11 11:09:42,091 | INFO     | traces error code: 0
[2026-04-11 13:16:10] 2026-04-11 11:09:42,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 13:16:10] 2026-04-11 11:09:42,205 [wrapper] ==== pilot stdout END ====
[2026-04-11 13:16:10] 2026-04-11 11:09:42,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 13:16:10] 2026-04-11 11:09:42,209 [wrapper] pilotpid: 1093435
[2026-04-11 13:16:10] 2026-04-11 11:09:42,211 [wrapper] Pilot exit status: 0
[2026-04-11 13:16:10] 2026-04-11 11:09:42,221 [wrapper] pandaids: 7083316570
[2026-04-11 13:16:10] 2026-04-11 11:09:42,279 [wrapper] cleanup supervisor_pilot 1340191 1093436
[2026-04-11 13:16:10] 2026-04-11 11:09:42,281 [wrapper] Test setup, not cleaning
[2026-04-11 13:16:10] 2026-04-11 11:09:42,283 [wrapper] apfmon messages muted
[2026-04-11 13:16:10] 2026-04-11 11:09:42,285 [wrapper] ==== wrapper stdout END ====
[2026-04-11 13:16:10] 2026-04-11 11:09:42,287 [wrapper] ==== wrapper stderr END ====
[2026-04-11 13:16:10]  *** Error codes and diagnostics ***
[2026-04-11 13:16:10]     "exeErrorCode": 0,
[2026-04-11 13:16:10]     "pilotErrorCode": 0,
[2026-04-11 13:16:10]  *** Listing of results directory ***
[2026-04-11 13:16:10] total 415308
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc    644190 Apr 10 03:35 pilot3.tar.gz
[2026-04-11 13:16:10] -rwx------. 1 boinc boinc     36322 Apr 10 03:37 runpilot2-wrapper.sh
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc      5094 Apr 10 03:39 queuedata.json
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc       100 Apr 11 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 13:16:10] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 10:00 run_atlas
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc       105 Apr 11 10:00 job.xml
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc 222234290 Apr 11 10:01 EVNT.49263198._000553.pool.root.1
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc      6482 Apr 11 10:01 init_data.xml
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc     15665 Apr 11 10:01 start_atlas.sh
[2026-04-11 13:16:10] drwxrwx--x. 2 boinc boinc      4096 Apr 11 10:01 shared
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc    656937 Apr 11 10:01 input.tar.gz
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc         0 Apr 11 10:01 boinc_lockfile
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc      2575 Apr 11 10:01 pandaJob.out
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc    997844 Apr 11 10:01 agis_schedconf.cvmfs.json
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc       452 Apr 11 10:01 workernode_map.json
[2026-04-11 13:16:10] drwx------. 5 boinc boinc      4096 Apr 11 10:01 pilot3
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc 196207355 Apr 11 13:08 HITS.49263200._031149.pool.root.1
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc        95 Apr 11 13:08 pilot_heartbeat.json
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc       487 Apr 11 13:08 boinc_task_state.xml
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc      1034 Apr 11 13:08 memory_monitor_summary.json
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc   1511579 Apr 11 13:08 agis_ddmendpoints.agis.ALL.json
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc    316968 Apr 11 13:08 log.49263200._031149.job.log.tgz.1
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc      6429 Apr 11 13:08 heartbeat_new.json
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc      6320 Apr 11 13:08 heartbeat.json
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc      4828 Apr 11 13:09 pilotlog.txt
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc   1066226 Apr 11 13:09 log.49263200._031149.job.log.1
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc       357 Apr 11 13:09 output.list
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc       410 Apr 11 13:09 runtime_log
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc   1402880 Apr 11 13:09 result.tar.gz
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc      8827 Apr 11 13:09 runtime_log.err
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc       665 Apr 11 13:09 546334e2a331.diag
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc        27 Apr 11 13:15 wrapper_checkpoint.txt
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc      8192 Apr 11 13:16 boinc_mmap_file
[2026-04-11 13:16:10] -rw-r--r--. 1 boinc boinc     20658 Apr 11 13:16 stderr.txt
[2026-04-11 13:16:10] HITS file was successfully produced:
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc 196207355 Apr 11 13:08 shared/HITS.pool.root.1
[2026-04-11 13:16:10]  *** Contents of shared directory: ***
[2026-04-11 13:16:10] total 410680
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc 222234290 Apr 11 10:01 ATLAS.root_0
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc     15665 Apr 11 10:01 start_atlas.sh
[2026-04-11 13:16:10] -rw-r--r--. 2 boinc boinc    656937 Apr 11 10:01 input.tar.gz
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc 196207355 Apr 11 13:08 HITS.pool.root.1
[2026-04-11 13:16:10] -rw-------. 1 boinc boinc   1402880 Apr 11 13:09 result.tar.gz
13:16:12 (1088754): run_atlas exited; CPU time 43395.998385
13:16:12 (1088754): called boinc_finish(0)

</stderr_txt>
]]>

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