Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:29:18 (801131): wrapper (7.7.26015): starting
09:29:18 (801131): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 09:29:18] Arguments: --nthreads 4
[2026-04-11 09:29:18] Threads: 4
[2026-04-11 09:29:18] Checking for CVMFS
[2026-04-11 09:29:18] No cvmfs_config command found, will try listing directly
[2026-04-11 09:29:18] CVMFS is ok
[2026-04-11 09:29:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 09:29:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 09:29:18] Further information can be found at the LHC@home message board.
[2026-04-11 09:29:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 09:29:18] Checking for apptainer binary...
[2026-04-11 09:29:18] which: no apptainer in ((null))
[2026-04-11 09:29:18] apptainer is not installed, using version from CVMFS
[2026-04-11 09:29:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 09:29:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-11 09:29:18] apptainer works
[2026-04-11 09:29:18] Set ATHENA_PROC_NUMBER=4
[2026-04-11 09:29:18] Set ATHENA_CORE_NUMBER=4
[2026-04-11 09:29:18] Starting ATLAS job with PandaID=7083299873
[2026-04-11 09:29:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 12:36:33]  *** The last 200 lines of the pilot log: ***
[2026-04-11 12:36:33] 2026-04-11 10:29:57,218 | INFO     | monitor loop #787: job 0:7083299873 is in state 'finished'
[2026-04-11 12:36:33] 2026-04-11 10:29:57,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,260 | INFO     | job 7083299873 has state=finished
[2026-04-11 12:36:33] 2026-04-11 10:29:59,260 | INFO     | preparing for final server update for job 7083299873 in state='finished'
[2026-04-11 12:36:33] 2026-04-11 10:29:59,261 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7083299873/jobReport.json
[2026-04-11 12:36:33] 2026-04-11 10:29:59,263 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/0/workernode_map.json
[2026-04-11 12:36:33] 2026-04-11 10:29:59,263 | INFO     | this job has now completed (state=finished)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,264 | INFO     | log transfer has been attempted: DONE
[2026-04-11 12:36:33] 2026-04-11 10:29:59,264 | INFO     | job 7083299873 has finished - writing final server update
[2026-04-11 12:36:33] 2026-04-11 10:29:59,264 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_755635/.job.ad'
[2026-04-11 12:36:33] 2026-04-11 10:29:59,264 | INFO     | total number of processed events: 400 (read)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,276 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7083299873/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,277 | INFO     | extracted standard info from prmon json
[2026-04-11 12:36:33] 2026-04-11 10:29:59,277 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 12:36:33] 2026-04-11 10:29:59,278 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 12:36:33] 2026-04-11 10:29:59,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 12:36:33] 2026-04-11 10:29:59,281 | INFO     | fitting pss+swap vs Time
[2026-04-11 12:36:33] 2026-04-11 10:29:59,282 | INFO     | sum of square deviations: 1719429448.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,283 | INFO     | sum of deviations: 13399488445.000011
[2026-04-11 12:36:33] 2026-04-11 10:29:59,283 | INFO     | mean x (centered): 0.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,283 | INFO     | mean y: 2327899.3333333335
[2026-04-11 12:36:33] 2026-04-11 10:29:59,283 | INFO     | intersect: 2327899.3333333335
[2026-04-11 12:36:33] 2026-04-11 10:29:59,283 | INFO     | chi2: 1.4082893169340793
[2026-04-11 12:36:33] 2026-04-11 10:29:59,284 | INFO     | sum of square deviations: 1577789583.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,285 | INFO     | sum of deviations: 13088110101.999996
[2026-04-11 12:36:33] 2026-04-11 10:29:59,285 | INFO     | mean x (centered): 0.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,285 | INFO     | mean y: 2327563.8720930233
[2026-04-11 12:36:33] 2026-04-11 10:29:59,285 | INFO     | intersect: 2327563.8720930233
[2026-04-11 12:36:33] 2026-04-11 10:29:59,286 | INFO     | chi2: 1.4094262290349426
[2026-04-11 12:36:33] 2026-04-11 10:29:59,286 | INFO     | current chi2=1.4094262290349426 (change=-0.08073000960757308 %)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,286 | INFO     | right removable region: 171
[2026-04-11 12:36:33] 2026-04-11 10:29:59,286 | INFO     | sum of square deviations: 1577789583.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,287 | INFO     | sum of deviations: -10775633347.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,287 | INFO     | mean x (centered): 0.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,287 | INFO     | mean y: 2353580.418604651
[2026-04-11 12:36:33] 2026-04-11 10:29:59,287 | INFO     | intersect: 2353580.418604651
[2026-04-11 12:36:33] 2026-04-11 10:29:59,288 | INFO     | chi2: 0.012505772244424167
[2026-04-11 12:36:33] 2026-04-11 10:29:59,288 | INFO     | current chi2=0.012505772244424167 (change=99.11198841785934 %)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,288 | INFO     | sum of square deviations: 1444149868.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,289 | INFO     | sum of deviations: -10060176790.999998
[2026-04-11 12:36:33] 2026-04-11 10:29:59,289 | INFO     | mean x (centered): 0.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,289 | INFO     | mean y: 2352759.8203592813
[2026-04-11 12:36:33] 2026-04-11 10:29:59,289 | INFO     | intersect: 2352759.8203592813
[2026-04-11 12:36:33] 2026-04-11 10:29:59,290 | INFO     | chi2: 0.0123805713531594
[2026-04-11 12:36:33] 2026-04-11 10:29:59,290 | INFO     | current chi2=0.0123805713531594 (change=1.0011448219088563 %)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,290 | INFO     | left removable region: 10
[2026-04-11 12:36:33] 2026-04-11 10:29:59,290 | INFO     | sum of square deviations: 1294014960.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,291 | INFO     | sum of deviations: -9652696120.000004
[2026-04-11 12:36:33] 2026-04-11 10:29:59,291 | INFO     | mean x (centered): 0.0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,291 | INFO     | mean y: 2353256.5900621116
[2026-04-11 12:36:33] 2026-04-11 10:29:59,291 | INFO     | intersect: 2353256.5900621116
[2026-04-11 12:36:33] 2026-04-11 10:29:59,292 | INFO     | chi2: 0.011835755849027898
[2026-04-11 12:36:33] 2026-04-11 10:29:59,292 | INFO     | current memory leak: -7.46 B/s (using 161 data points, chi2=0.01)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,292 | INFO     | could have reported an average CPU frequency of 2554 MHz (9 samples)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | ..............................
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . Timing measurements:
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . get job = 0 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . initial setup = 5 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . payload setup = 9 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . stage-in = 0 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . payload execution = 10793 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . stage-out = 1 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | . log creation = 0 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,293 | INFO     | ..............................
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | 
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | job summary report
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | --------------------------------------------------
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | PanDA job id: 7083299873
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | task id: 49263191
[2026-04-11 12:36:33] 2026-04-11 10:29:59,393 | INFO     | errors: (none)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | pilot state: finished 
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | transexitcode: 0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | exeerrorcode: 0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | exeerrordiag: 
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | exitcode: 0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | exitmsg: OK
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | cpuconsumptiontime: 41681 s
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | nevents: 400
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | neventsw: 0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | pid: 812305
[2026-04-11 12:36:33] 2026-04-11 10:29:59,394 | INFO     | pgrp: 812305
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | corecount: 4
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | event service: False
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | sizes: {0: 2279907, 1: 2281481, 11: 2281509, 10807: 2310446, 10808: 2319466, 10811: 2319522, 10813: 2319908}
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | --------------------------------------------------
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | 
[2026-04-11 12:36:33] 2026-04-11 10:29:59,395 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-11 12:36:33] 2026-04-11 10:29:59,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 12:36:33] 2026-04-11 10:29:59,419 | INFO     | job 7083299873 has completed (purged errors)
[2026-04-11 12:36:33] 2026-04-11 10:29:59,420 | INFO     | overall cleanup function is called
[2026-04-11 12:36:33] 2026-04-11 10:30:00,428 | INFO     | --- collectZombieJob: --- 10, [812305]
[2026-04-11 12:36:33] 2026-04-11 10:30:00,428 | INFO     | zombie collector waiting for pid 812305
[2026-04-11 12:36:33] 2026-04-11 10:30:00,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 12:36:33] 2026-04-11 10:30:00,428 | INFO     | collected zombie processes
[2026-04-11 12:36:33] 2026-04-11 10:30:00,428 | INFO     | will attempt to kill all subprocesses of pid=812305
[2026-04-11 12:36:33] 2026-04-11 10:30:00,843 | INFO     | process IDs to be killed: [812305] (in reverse order)
[2026-04-11 12:36:33] 2026-04-11 10:30:00,975 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 12:36:33] 2026-04-11 10:30:00,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 12:36:33] 2026-04-11 10:30:00,988 | INFO     | did not find any defunct processes belonging to 812305
[2026-04-11 12:36:33] 2026-04-11 10:30:01,001 | INFO     | did not find any defunct processes belonging to 812305
[2026-04-11 12:36:33] 2026-04-11 10:30:01,001 | INFO     | Ready for new job
[2026-04-11 12:36:33] 2026-04-11 10:30:01,003 | INFO     | **************************************
[2026-04-11 12:36:33] 2026-04-11 10:30:01,004 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 12:36:33] 2026-04-11 10:30:01,004 | INFO     | **************************************
[2026-04-11 12:36:33] 2026-04-11 10:30:01,004 | INFO     | 
[2026-04-11 12:36:33] 2026-04-11 10:30:01,008 | INFO     | architecture information:
[2026-04-11 12:36:33] 2026-04-11 10:30:01,008 | INFO     | executing command: cat /etc/os-release
[2026-04-11 12:36:33] 2026-04-11 10:30:01,023 | INFO     | cat /etc/os-release:
[2026-04-11 12:36:33] NAME="CentOS Linux"
[2026-04-11 12:36:33] VERSION="7 (Core)"
[2026-04-11 12:36:33] ID="centos"
[2026-04-11 12:36:33] ID_LIKE="rhel fedora"
[2026-04-11 12:36:33] VERSION_ID="7"
[2026-04-11 12:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 12:36:33] ANSI_COLOR="0;31"
[2026-04-11 12:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 12:36:33] HOME_URL="https://www.centos.org/"
[2026-04-11 12:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 12:36:33] 
[2026-04-11 12:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 12:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 12:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 12:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 12:36:33] 
[2026-04-11 12:36:33] 2026-04-11 10:30:01,024 | INFO     | **************************************
[2026-04-11 12:36:33] 2026-04-11 10:30:01,527 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-11 12:36:33] 2026-04-11 10:30:01,542 | INFO     | sufficient remaining disk space (27844935680 B)
[2026-04-11 12:36:33] 2026-04-11 10:30:01,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 12:36:33] 2026-04-11 10:30:01,543 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 12:36:33] 2026-04-11 10:30:01,543 | INFO     | update_server=False
[2026-04-11 12:36:33] 2026-04-11 10:30:01,543 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 12:36:33] 2026-04-11 10:30:01,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:36:33] 2026-04-11 10:30:01,544 | INFO     | aborting loop
[2026-04-11 12:36:33] 2026-04-11 10:30:01,840 | INFO     | all data control threads have been joined
[2026-04-11 12:36:33] 2026-04-11 10:30:02,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 12:36:33] 2026-04-11 10:30:02,548 | INFO     | [job] retrieve thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:02,550 | INFO     | [job] job monitor thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:02,569 | INFO     | [payload] failed_post thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:02,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 12:36:33] 2026-04-11 10:30:02,845 | INFO     | [data] control thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:02,886 | INFO     | all payload control threads have been joined
[2026-04-11 12:36:33] 2026-04-11 10:30:02,905 | INFO     | [data] copytool_in thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:02,915 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:03,216 | INFO     | all job control threads have been joined
[2026-04-11 12:36:33] 2026-04-11 10:30:03,323 | INFO     | [job] validate thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:03,621 | INFO     | [payload] validate_post thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:03,685 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:03,888 | INFO     | [payload] control thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:03,942 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:04,207 | INFO     | [data] copytool_out thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:04,222 | INFO     | [job] control thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:04,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 12:36:33] 2026-04-11 10:30:05,406 | INFO     | [job] queue monitor thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:06,698 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:12,254 | INFO     | job.realtimelogging is not enabled
[2026-04-11 12:36:33] 2026-04-11 10:30:13,259 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 12:36:33] 2026-04-11 10:30:32,049 | INFO     | PID=805073 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 12:36:33] 2026-04-11 10:30:32,049 | INFO     | .. there are 11 such processes running
[2026-04-11 12:36:33] 2026-04-11 10:30:32,050 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 12:36:33] 2026-04-11 10:30:32,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 12:36:33] 2026-04-11 10:30:32,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 12:36:33] 2026-04-11 10:30:52,069 | INFO     | [monitor] cgroup control has ended
[2026-04-11 12:36:33] 2026-04-11 10:30:52,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22582975674176)>', '<ExcThread(monitor, started 22582665402112)>']
[2026-04-11 12:36:33] 2026-04-11 10:30:53,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 12:36:33] 2026-04-11 10:30:53,099 | INFO     | [monitor] control thread has ended
[2026-04-11 12:36:33] 2026-04-11 10:30:58,013 | INFO     | all workflow threads have been joined
[2026-04-11 12:36:33] 2026-04-11 10:30:58,013 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 12:36:33] 2026-04-11 10:30:58,013 | INFO     | traces error code: 0
[2026-04-11 12:36:33] 2026-04-11 10:30:58,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 12:36:33] 2026-04-11 10:30:58,157 [wrapper] ==== pilot stdout END ====
[2026-04-11 12:36:33] 2026-04-11 10:30:58,159 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 12:36:33] 2026-04-11 10:30:58,162 [wrapper] pilotpid: 805073
[2026-04-11 12:36:33] 2026-04-11 10:30:58,165 [wrapper] Pilot exit status: 0
[2026-04-11 12:36:33] 2026-04-11 10:30:58,175 [wrapper] pandaids: 7083299873
[2026-04-11 12:36:33] 2026-04-11 10:30:58,258 [wrapper] cleanup supervisor_pilot 1003448 805074
[2026-04-11 12:36:33] 2026-04-11 10:30:58,261 [wrapper] Test setup, not cleaning
[2026-04-11 12:36:33] 2026-04-11 10:30:58,264 [wrapper] apfmon messages muted
[2026-04-11 12:36:33] 2026-04-11 10:30:58,267 [wrapper] ==== wrapper stdout END ====
[2026-04-11 12:36:33] 2026-04-11 10:30:58,270 [wrapper] ==== wrapper stderr END ====
[2026-04-11 12:36:33]  *** Error codes and diagnostics ***
[2026-04-11 12:36:33]     "exeErrorCode": 0,
[2026-04-11 12:36:33]     "pilotErrorCode": 0,
[2026-04-11 12:36:33]  *** Listing of results directory ***
[2026-04-11 12:36:33] total 416556
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc    644190 Apr 10 02:06 pilot3.tar.gz
[2026-04-11 12:36:33] -rwx------. 1 boinc boinc     36322 Apr 10 02:19 runpilot2-wrapper.sh
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc      5094 Apr 10 02:29 queuedata.json
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc       100 Apr 11 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 12:36:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 09:29 run_atlas
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc       105 Apr 11 09:29 job.xml
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc 224879826 Apr 11 09:29 EVNT.49263189._000585.pool.root.1
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc      6480 Apr 11 09:29 init_data.xml
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc     15665 Apr 11 09:29 start_atlas.sh
[2026-04-11 12:36:33] drwxrwx--x. 2 boinc boinc      4096 Apr 11 09:29 shared
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc    656939 Apr 11 09:29 input.tar.gz
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc         0 Apr 11 09:29 boinc_lockfile
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc      2577 Apr 11 09:29 pandaJob.out
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc    997844 Apr 11 09:29 agis_schedconf.cvmfs.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc       452 Apr 11 09:29 workernode_map.json
[2026-04-11 12:36:33] drwx------. 5 boinc boinc      4096 Apr 11 09:29 pilot3
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc 194944723 Apr 11 12:29 HITS.49263191._035138.pool.root.1
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc       488 Apr 11 12:29 boinc_task_state.xml
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc        95 Apr 11 12:29 pilot_heartbeat.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc      1035 Apr 11 12:29 memory_monitor_summary.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc   1511579 Apr 11 12:29 agis_ddmendpoints.agis.ALL.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc    318325 Apr 11 12:29 log.49263191._035138.job.log.tgz.1
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc      6428 Apr 11 12:29 heartbeat_new.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc      6319 Apr 11 12:29 heartbeat.json
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc      4899 Apr 11 12:30 pilotlog.txt
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc   1017445 Apr 11 12:30 log.49263191._035138.job.log.1
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc       357 Apr 11 12:30 output.list
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc       410 Apr 11 12:30 runtime_log
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc   1351680 Apr 11 12:30 result.tar.gz
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc      8827 Apr 11 12:30 runtime_log.err
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc       665 Apr 11 12:30 421a40aee641.diag
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc        27 Apr 11 12:36 wrapper_checkpoint.txt
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc      8192 Apr 11 12:36 boinc_mmap_file
[2026-04-11 12:36:33] -rw-r--r--. 1 boinc boinc     21057 Apr 11 12:36 stderr.txt
[2026-04-11 12:36:33] HITS file was successfully produced:
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc 194944723 Apr 11 12:29 shared/HITS.pool.root.1
[2026-04-11 12:36:33]  *** Contents of shared directory: ***
[2026-04-11 12:36:33] total 411976
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc 224879826 Apr 11 09:29 ATLAS.root_0
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc     15665 Apr 11 09:29 start_atlas.sh
[2026-04-11 12:36:33] -rw-r--r--. 2 boinc boinc    656939 Apr 11 09:29 input.tar.gz
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc 194944723 Apr 11 12:29 HITS.pool.root.1
[2026-04-11 12:36:33] -rw-------. 1 boinc boinc   1351680 Apr 11 12:30 result.tar.gz
12:36:35 (801131): run_atlas exited; CPU time 42066.229523
12:36:35 (801131): called boinc_finish(0)

</stderr_txt>
]]>

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