Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:55 (943648): wrapper (7.7.26015): starting
07:54:55 (943648): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 07:54:55] Arguments: --nthreads 4
[2026-04-11 07:54:55] Threads: 4
[2026-04-11 07:54:55] Checking for CVMFS
[2026-04-11 07:54:55] No cvmfs_config command found, will try listing directly
[2026-04-11 07:54:55] CVMFS is ok
[2026-04-11 07:54:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 07:54:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 07:54:55] Further information can be found at the LHC@home message board.
[2026-04-11 07:54:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 07:54:55] Checking for apptainer binary...
[2026-04-11 07:54:55] which: no apptainer in ((null))
[2026-04-11 07:54:55] apptainer is not installed, using version from CVMFS
[2026-04-11 07:54:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 07:54:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-04-11 07:54:56] apptainer works
[2026-04-11 07:54:56] Set ATHENA_PROC_NUMBER=4
[2026-04-11 07:54:56] Set ATHENA_CORE_NUMBER=4
[2026-04-11 07:54:56] Starting ATLAS job with PandaID=7083299947
[2026-04-11 07:54:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 11:04:22]  *** The last 200 lines of the pilot log: ***
[2026-04-11 11:04:22] 2026-04-11 09:02:59,364 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 11:04:22] 2026-04-11 09:02:59,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 11:04:22] 2026-04-11 09:02:59,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 11:04:22] 2026-04-11 09:02:59,368 | INFO     | fitting pss+swap vs Time
[2026-04-11 11:04:22] 2026-04-11 09:02:59,368 | INFO     | sum of square deviations: 1931608310.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,369 | INFO     | sum of deviations: 16900961797.5
[2026-04-11 11:04:22] 2026-04-11 09:02:59,370 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,370 | INFO     | mean y: 2294570.1032608696
[2026-04-11 11:04:22] 2026-04-11 09:02:59,370 | INFO     | intersect: 2294570.1032608696
[2026-04-11 11:04:22] 2026-04-11 09:02:59,370 | INFO     | chi2: 2.2534867549097424
[2026-04-11 11:04:22] 2026-04-11 09:02:59,371 | INFO     | sum of square deviations: 1778377530.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | sum of deviations: 27844886245.000004
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | mean y: 2305205.284916201
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | intersect: 2305205.284916201
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | chi2: 1.4304236519054816
[2026-04-11 11:04:22] 2026-04-11 09:02:59,372 | INFO     | current chi2=1.4304236519054816 (change=36.52398227817525 %)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,373 | INFO     | sum of square deviations: 1633472487.5
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | sum of deviations: 26866749506.499996
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | mean y: 2304175.603448276
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | intersect: 2304175.603448276
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | chi2: 1.4313446950121824
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | current chi2=1.4313446950121824 (change=-0.06438953281245695 %)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,374 | INFO     | right removable region: 173
[2026-04-11 11:04:22] 2026-04-11 09:02:59,375 | INFO     | sum of square deviations: 1778377530.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,376 | INFO     | sum of deviations: -8063941177.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,376 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,376 | INFO     | mean y: 2319086.653631285
[2026-04-11 11:04:22] 2026-04-11 09:02:59,376 | INFO     | intersect: 2319086.653631285
[2026-04-11 11:04:22] 2026-04-11 09:02:59,377 | INFO     | chi2: 0.8530398514281415
[2026-04-11 11:04:22] 2026-04-11 09:02:59,377 | INFO     | current chi2=0.8530398514281415 (change=62.1457792210406 %)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,377 | INFO     | sum of square deviations: 1633472487.5
[2026-04-11 11:04:22] 2026-04-11 09:02:59,378 | INFO     | sum of deviations: -7150317825.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,378 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,378 | INFO     | mean y: 2318104.3333333335
[2026-04-11 11:04:22] 2026-04-11 09:02:59,378 | INFO     | intersect: 2318104.3333333335
[2026-04-11 11:04:22] 2026-04-11 09:02:59,379 | INFO     | chi2: 0.8494823221971907
[2026-04-11 11:04:22] 2026-04-11 09:02:59,379 | INFO     | current chi2=0.8494823221971907 (change=0.4170413873390478 %)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,379 | INFO     | left removable region: 10
[2026-04-11 11:04:22] 2026-04-11 09:02:59,379 | INFO     | sum of square deviations: 1342841922.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,380 | INFO     | sum of deviations: 3499143122.0000014
[2026-04-11 11:04:22] 2026-04-11 09:02:59,380 | INFO     | mean x (centered): 0.0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,380 | INFO     | mean y: 2329662.4478527606
[2026-04-11 11:04:22] 2026-04-11 09:02:59,380 | INFO     | intersect: 2329662.4478527606
[2026-04-11 11:04:22] 2026-04-11 09:02:59,381 | INFO     | chi2: 0.0021684582185769064
[2026-04-11 11:04:22] 2026-04-11 09:02:59,381 | INFO     | current memory leak: 2.61 B/s (using 163 data points, chi2=0.00)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,381 | INFO     | could have reported an average CPU frequency of 2538 MHz (10 samples)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,381 | INFO     | ..............................
[2026-04-11 11:04:22] 2026-04-11 09:02:59,381 | INFO     | . Timing measurements:
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . get job = 0 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . initial setup = 14 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . payload setup = 19 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . stage-in = 0 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . payload execution = 11205 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . stage-out = 1 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | . log creation = 0 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,382 | INFO     | ..............................
[2026-04-11 11:04:22] 2026-04-11 09:02:59,521 | INFO     | 
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | job summary report
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | --------------------------------------------------
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | PanDA job id: 7083299947
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | task id: 49263191
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | errors: (none)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | pilot state: finished 
[2026-04-11 11:04:22] 2026-04-11 09:02:59,522 | INFO     | transexitcode: 0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | exeerrorcode: 0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | exeerrordiag: 
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | exitcode: 0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | exitmsg: OK
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | cpuconsumptiontime: 42659 s
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | nevents: 400
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | neventsw: 0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | pid: 953161
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | pgrp: 953161
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | corecount: 4
[2026-04-11 11:04:22] 2026-04-11 09:02:59,523 | INFO     | event service: False
[2026-04-11 11:04:22] 2026-04-11 09:02:59,524 | INFO     | sizes: {0: 2279680, 1: 2281509, 12: 2281509, 11229: 2310758, 11231: 2319778, 11232: 2320156}
[2026-04-11 11:04:22] 2026-04-11 09:02:59,524 | INFO     | --------------------------------------------------
[2026-04-11 11:04:22] 2026-04-11 09:02:59,524 | INFO     | 
[2026-04-11 11:04:22] 2026-04-11 09:02:59,524 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-04-11 11:04:22] 2026-04-11 09:02:59,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | job 7083299947 has completed (purged errors)
[2026-04-11 11:04:22] 2026-04-11 09:02:59,546 | INFO     | overall cleanup function is called
[2026-04-11 11:04:22] 2026-04-11 09:02:59,880 | WARNING  | process 953161 can no longer be monitored (due to stat problems) - aborting
[2026-04-11 11:04:22] 2026-04-11 09:03:00,169 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 11:04:22] 2026-04-11 09:03:00,170 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 11:04:22] 2026-04-11 09:03:00,170 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-11 11:04:22] 2026-04-11 09:03:00,170 | WARNING  | maxPSS not found in memory monitor output
[2026-04-11 11:04:22] 2026-04-11 09:03:00,545 | INFO     | number of running child processes to parent process 953161: 1
[2026-04-11 11:04:22] 2026-04-11 09:03:00,545 | INFO     | maximum number of monitored processes: 6
[2026-04-11 11:04:22] 2026-04-11 09:03:00,545 | INFO     | aborting job monitoring since job object (job id=7083299947) has expired
[2026-04-11 11:04:22] 2026-04-11 09:03:00,556 | INFO     | --- collectZombieJob: --- 10, [953161]
[2026-04-11 11:04:22] 2026-04-11 09:03:00,556 | INFO     | zombie collector waiting for pid 953161
[2026-04-11 11:04:22] 2026-04-11 09:03:00,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 11:04:22] 2026-04-11 09:03:00,556 | INFO     | collected zombie processes
[2026-04-11 11:04:22] 2026-04-11 09:03:00,556 | INFO     | will attempt to kill all subprocesses of pid=953161
[2026-04-11 11:04:22] 2026-04-11 09:03:00,942 | INFO     | process IDs to be killed: [953161] (in reverse order)
[2026-04-11 11:04:22] 2026-04-11 09:03:01,067 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 11:04:22] 2026-04-11 09:03:01,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 11:04:22] 2026-04-11 09:03:01,080 | INFO     | did not find any defunct processes belonging to 953161
[2026-04-11 11:04:22] 2026-04-11 09:03:01,093 | INFO     | did not find any defunct processes belonging to 953161
[2026-04-11 11:04:22] 2026-04-11 09:03:01,093 | INFO     | Ready for new job
[2026-04-11 11:04:22] 2026-04-11 09:03:01,095 | INFO     | **************************************
[2026-04-11 11:04:22] 2026-04-11 09:03:01,095 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 11:04:22] 2026-04-11 09:03:01,095 | INFO     | **************************************
[2026-04-11 11:04:22] 2026-04-11 09:03:01,095 | INFO     | 
[2026-04-11 11:04:22] 2026-04-11 09:03:01,099 | INFO     | architecture information:
[2026-04-11 11:04:22] 2026-04-11 09:03:01,100 | INFO     | executing command: cat /etc/os-release
[2026-04-11 11:04:22] 2026-04-11 09:03:01,117 | INFO     | cat /etc/os-release:
[2026-04-11 11:04:22] NAME="CentOS Linux"
[2026-04-11 11:04:22] VERSION="7 (Core)"
[2026-04-11 11:04:22] ID="centos"
[2026-04-11 11:04:22] ID_LIKE="rhel fedora"
[2026-04-11 11:04:22] VERSION_ID="7"
[2026-04-11 11:04:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 11:04:22] ANSI_COLOR="0;31"
[2026-04-11 11:04:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 11:04:22] HOME_URL="https://www.centos.org/"
[2026-04-11 11:04:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 11:04:22] 
[2026-04-11 11:04:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 11:04:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 11:04:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 11:04:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 11:04:22] 
[2026-04-11 11:04:22] 2026-04-11 09:03:01,117 | INFO     | **************************************
[2026-04-11 11:04:22] 2026-04-11 09:03:01,620 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-04-11 11:04:22] 2026-04-11 09:03:01,639 | INFO     | sufficient remaining disk space (29396828160 B)
[2026-04-11 11:04:22] 2026-04-11 09:03:01,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 11:04:22] 2026-04-11 09:03:01,639 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 11:04:22] 2026-04-11 09:03:01,640 | INFO     | update_server=False
[2026-04-11 11:04:22] 2026-04-11 09:03:01,640 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 11:04:22] 2026-04-11 09:03:01,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 11:04:22] 2026-04-11 09:03:01,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 11:04:22] 2026-04-11 09:03:01,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 11:04:22] 2026-04-11 09:03:01,641 | INFO     | aborting loop
[2026-04-11 11:04:22] 2026-04-11 09:03:01,902 | INFO     | all data control threads have been joined
[2026-04-11 11:04:22] 2026-04-11 09:03:02,291 | INFO     | all job control threads have been joined
[2026-04-11 11:04:22] 2026-04-11 09:03:02,488 | INFO     | all payload control threads have been joined
[2026-04-11 11:04:22] 2026-04-11 09:03:02,646 | INFO     | [job] retrieve thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:02,646 | INFO     | [job] job monitor thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:02,668 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:02,719 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:02,824 | INFO     | [payload] failed_post thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:02,907 | INFO     | [data] control thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,025 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,297 | INFO     | [job] control thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,319 | INFO     | [data] copytool_in thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,493 | INFO     | [payload] control thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,642 | INFO     | [payload] validate_post thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,646 | INFO     | [data] copytool_out thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,688 | INFO     | [job] validate thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:03,980 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:04,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 11:04:22] 2026-04-11 09:03:05,492 | INFO     | [job] queue monitor thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:05,646 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 11:04:22] 2026-04-11 09:03:31,374 | INFO     | PID=948085 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 11:04:22] 2026-04-11 09:03:31,374 | INFO     | .. there are 11 such processes running
[2026-04-11 11:04:22] 2026-04-11 09:03:31,375 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 11:04:22] 2026-04-11 09:03:31,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 11:04:22] 2026-04-11 09:03:31,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 11:04:22] 2026-04-11 09:03:53,453 | INFO     | [monitor] cgroup control has ended
[2026-04-11 11:04:22] 2026-04-11 09:03:53,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23362574485312)>', '<ExcThread(monitor, started 23362264872704)>']
[2026-04-11 11:04:22] 2026-04-11 09:03:54,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 11:04:22] 2026-04-11 09:03:54,469 | INFO     | [monitor] control thread has ended
[2026-04-11 11:04:22] 2026-04-11 09:03:58,956 | INFO     | all workflow threads have been joined
[2026-04-11 11:04:22] 2026-04-11 09:03:58,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 11:04:22] 2026-04-11 09:03:58,957 | INFO     | traces error code: 0
[2026-04-11 11:04:22] 2026-04-11 09:03:58,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 11:04:22] 2026-04-11 09:03:59,088 [wrapper] ==== pilot stdout END ====
[2026-04-11 11:04:22] 2026-04-11 09:03:59,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 11:04:22] 2026-04-11 09:03:59,093 [wrapper] pilotpid: 948085
[2026-04-11 11:04:22] 2026-04-11 09:03:59,097 [wrapper] Pilot exit status: 0
[2026-04-11 11:04:22] 2026-04-11 09:03:59,107 [wrapper] pandaids: 7083299947
[2026-04-11 11:04:22] 2026-04-11 09:03:59,187 [wrapper] cleanup supervisor_pilot 1184128 948086
[2026-04-11 11:04:22] 2026-04-11 09:03:59,190 [wrapper] Test setup, not cleaning
[2026-04-11 11:04:22] 2026-04-11 09:03:59,193 [wrapper] apfmon messages muted
[2026-04-11 11:04:22] 2026-04-11 09:03:59,196 [wrapper] ==== wrapper stdout END ====
[2026-04-11 11:04:22] 2026-04-11 09:03:59,199 [wrapper] ==== wrapper stderr END ====
[2026-04-11 11:04:22]  *** Error codes and diagnostics ***
[2026-04-11 11:04:22]     "exeErrorCode": 0,
[2026-04-11 11:04:22]     "pilotErrorCode": 0,
[2026-04-11 11:04:22]  *** Listing of results directory ***
[2026-04-11 11:04:22] total 417692
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc    644190 Apr 10 02:06 pilot3.tar.gz
[2026-04-11 11:04:22] -rwx------. 1 boinc boinc     36322 Apr 10 02:17 runpilot2-wrapper.sh
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc      5094 Apr 10 02:29 queuedata.json
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc       100 Apr 11 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 11:04:22] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 07:54 run_atlas
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc       105 Apr 11 07:54 job.xml
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc      6481 Apr 11 07:54 init_data.xml
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc 222891415 Apr 11 07:54 EVNT.49263189._000592.pool.root.1
[2026-04-11 11:04:22] drwxrwx--x. 2 boinc boinc      4096 Apr 11 07:54 shared
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc    656932 Apr 11 07:54 input.tar.gz
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc     15665 Apr 11 07:54 start_atlas.sh
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc         0 Apr 11 07:54 boinc_lockfile
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc      2577 Apr 11 07:54 pandaJob.out
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc    997844 Apr 11 07:55 agis_schedconf.cvmfs.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc       452 Apr 11 07:55 workernode_map.json
[2026-04-11 11:04:22] drwx------. 5 boinc boinc      4096 Apr 11 07:55 pilot3
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc 197997523 Apr 11 11:02 HITS.49263191._035212.pool.root.1
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc       488 Apr 11 11:02 boinc_task_state.xml
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc      1045 Apr 11 11:02 memory_monitor_summary.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc   1511579 Apr 11 11:02 agis_ddmendpoints.agis.ALL.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc    321761 Apr 11 11:02 log.49263191._035212.job.log.tgz.1
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc      6427 Apr 11 11:02 heartbeat_new.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc      6318 Apr 11 11:02 heartbeat.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc        95 Apr 11 11:03 pilot_heartbeat.json
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc      4827 Apr 11 11:03 pilotlog.txt
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc   1063178 Apr 11 11:03 log.49263191._035212.job.log.1
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc       357 Apr 11 11:03 output.list
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc       410 Apr 11 11:03 runtime_log
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc   1402880 Apr 11 11:03 result.tar.gz
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc      8827 Apr 11 11:03 runtime_log.err
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc       665 Apr 11 11:03 41b0866d1f30.diag
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc      8192 Apr 11 11:04 boinc_mmap_file
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc        27 Apr 11 11:04 wrapper_checkpoint.txt
[2026-04-11 11:04:22] -rw-r--r--. 1 boinc boinc     20832 Apr 11 11:04 stderr.txt
[2026-04-11 11:04:22] HITS file was successfully produced:
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc 197997523 Apr 11 11:02 shared/HITS.pool.root.1
[2026-04-11 11:04:22]  *** Contents of shared directory: ***
[2026-04-11 11:04:22] total 413064
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc 222891415 Apr 11 07:54 ATLAS.root_0
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc    656932 Apr 11 07:54 input.tar.gz
[2026-04-11 11:04:22] -rw-r--r--. 2 boinc boinc     15665 Apr 11 07:54 start_atlas.sh
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc 197997523 Apr 11 11:02 HITS.pool.root.1
[2026-04-11 11:04:22] -rw-------. 1 boinc boinc   1402880 Apr 11 11:03 result.tar.gz
11:04:24 (943648): run_atlas exited; CPU time 43091.421666
11:04:24 (943648): called boinc_finish(0)

</stderr_txt>
]]>

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