Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:41:28 (4078): wrapper (7.7.26015): starting
02:41:28 (4078): wrapper: running run_atlas (--nthreads 4)
[2026-04-10 02:41:28] Arguments: --nthreads 4
[2026-04-10 02:41:28] Threads: 4
[2026-04-10 02:41:28] Checking for CVMFS
[2026-04-10 02:41:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 02:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 02:41:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 02:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 02:41:52] 2.12.7.0 4300 0 25388 158280 3 1 3176188 4194304 0 130560 0 0 0.000 1337 4707 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-10 02:41:52] CVMFS is ok
[2026-04-10 02:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 02:41:52] Checking for apptainer binary...
[2026-04-10 02:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-10 02:41:52] Running /usr/bin/apptainer --version
[2026-04-10 02:41:53] apptainer version 1.0.3
[2026-04-10 02:41:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 02:41:54] TeeC03
[2026-04-10 02:41:54] apptainer works
[2026-04-10 02:41:54] Set ATHENA_PROC_NUMBER=4
[2026-04-10 02:41:54] Set ATHENA_CORE_NUMBER=4
[2026-04-10 02:41:54] Starting ATLAS job with PandaID=7083297821
[2026-04-10 02:41:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 05:42:48]  *** The last 200 lines of the pilot log: ***
[2026-04-10 05:42:48] 2026-04-10 04:42:07,757 | INFO     | output file size check: skipping output file /home/m/BOINC/slots/2/PanDA_Pilot-7083297821/HITS.49263191._034411.pool.root.1 since it does not exist
[2026-04-10 05:42:48] 2026-04-10 04:42:07,805 | INFO     | number of running child processes to parent process 12767: 1
[2026-04-10 05:42:48] 2026-04-10 04:42:07,805 | INFO     | maximum number of monitored processes: 6
[2026-04-10 05:42:48] 2026-04-10 04:42:07,865 | INFO     | job 7083297821 has state=finished
[2026-04-10 05:42:48] 2026-04-10 04:42:07,866 | INFO     | preparing for final server update for job 7083297821 in state='finished'
[2026-04-10 05:42:48] 2026-04-10 04:42:07,866 | INFO     | reading metadata from: /home/m/BOINC/slots/2/PanDA_Pilot-7083297821/jobReport.json
[2026-04-10 05:42:48] 2026-04-10 04:42:07,869 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/2/workernode_map.json
[2026-04-10 05:42:48] 2026-04-10 04:42:07,870 | INFO     | this job has now completed (state=finished)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,870 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,870 | INFO     | log transfer has been attempted: DONE
[2026-04-10 05:42:48] 2026-04-10 04:42:07,871 | INFO     | job 7083297821 has finished - writing final server update
[2026-04-10 05:42:48] 2026-04-10 04:42:07,871 | INFO     | total number of processed events: 400 (read)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,892 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-7083297821/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,894 | INFO     | extracted standard info from prmon json
[2026-04-10 05:42:48] 2026-04-10 04:42:07,894 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 05:42:48] 2026-04-10 04:42:07,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 05:42:48] 2026-04-10 04:42:07,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 05:42:48] 2026-04-10 04:42:07,901 | INFO     | fitting pss+swap vs Time
[2026-04-10 05:42:48] 2026-04-10 04:42:07,902 | INFO     | sum of square deviations: 1693329855.8579507
[2026-04-10 05:42:48] 2026-04-10 04:42:07,904 | INFO     | sum of deviations: -9181103539.556824
[2026-04-10 05:42:48] 2026-04-10 04:42:07,904 | INFO     | mean x (centered): 0.0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,904 | INFO     | mean y: 2377949.4886363638
[2026-04-10 05:42:48] 2026-04-10 04:42:07,904 | INFO     | intersect: 2377949.4886363638
[2026-04-10 05:42:48] 2026-04-10 04:42:07,905 | INFO     | chi2: 1.6845890968598765
[2026-04-10 05:42:48] 2026-04-10 04:42:07,906 | INFO     | sum of square deviations: 1552984833.8362625
[2026-04-10 05:42:48] 2026-04-10 04:42:07,908 | INFO     | sum of deviations: -9062133333.818716
[2026-04-10 05:42:48] 2026-04-10 04:42:07,908 | INFO     | mean x (centered): 0.0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,908 | INFO     | mean y: 2378078.976608187
[2026-04-10 05:42:48] 2026-04-10 04:42:07,908 | INFO     | intersect: 2378078.976608187
[2026-04-10 05:42:48] 2026-04-10 04:42:07,909 | INFO     | chi2: 1.6821186241106094
[2026-04-10 05:42:48] 2026-04-10 04:42:07,909 | INFO     | current chi2=1.6821186241106094 (change=0.14665135574438137 %)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,909 | INFO     | right removable region: 170
[2026-04-10 05:42:48] 2026-04-10 04:42:07,910 | INFO     | sum of square deviations: 1553202770.853803
[2026-04-10 05:42:48] 2026-04-10 04:42:07,912 | INFO     | sum of deviations: -29503394521.590706
[2026-04-10 05:42:48] 2026-04-10 04:42:07,912 | INFO     | mean x (centered): 0.0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,912 | INFO     | mean y: 2399653.918128655
[2026-04-10 05:42:48] 2026-04-10 04:42:07,912 | INFO     | intersect: 2399653.918128655
[2026-04-10 05:42:48] 2026-04-10 04:42:07,913 | INFO     | chi2: 0.2911484424986036
[2026-04-10 05:42:48] 2026-04-10 04:42:07,913 | INFO     | current chi2=0.2911484424986036 (change=82.7169460468839 %)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,914 | INFO     | sum of square deviations: 1421029322.1445713
[2026-04-10 05:42:48] 2026-04-10 04:42:07,915 | INFO     | sum of deviations: -21810977182.12048
[2026-04-10 05:42:48] 2026-04-10 04:42:07,915 | INFO     | mean x (centered): 0.0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,915 | INFO     | mean y: 2390752.174698795
[2026-04-10 05:42:48] 2026-04-10 04:42:07,916 | INFO     | intersect: 2390752.174698795
[2026-04-10 05:42:48] 2026-04-10 04:42:07,916 | INFO     | chi2: 0.25562302059177244
[2026-04-10 05:42:48] 2026-04-10 04:42:07,916 | INFO     | current chi2=0.25562302059177244 (change=12.201824472065157 %)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,916 | INFO     | left removable region: 10
[2026-04-10 05:42:48] 2026-04-10 04:42:07,917 | INFO     | sum of square deviations: 1272360301.2437532
[2026-04-10 05:42:48] 2026-04-10 04:42:07,918 | INFO     | sum of deviations: -21277541548.85625
[2026-04-10 05:42:48] 2026-04-10 04:42:07,919 | INFO     | mean x (centered): 0.0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,919 | INFO     | mean y: 2391410.26875
[2026-04-10 05:42:48] 2026-04-10 04:42:07,919 | INFO     | intersect: 2391410.26875
[2026-04-10 05:42:48] 2026-04-10 04:42:07,919 | INFO     | chi2: 0.2511151554073025
[2026-04-10 05:42:48] 2026-04-10 04:42:07,920 | INFO     | current memory leak: -16.72 B/s (using 160 data points, chi2=0.25)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | could have reported an average CPU frequency of 3199 MHz (9 samples)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | ..............................
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . Timing measurements:
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . get job = 0 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . initial setup = 5 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . payload setup = 8 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . stage-in = 0 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,921 | INFO     | . payload execution = 10736 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,922 | INFO     | . stage-out = 0 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,922 | INFO     | . log creation = 0 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,922 | INFO     | ..............................
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | 
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | job summary report
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | --------------------------------------------------
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | PanDA job id: 7083297821
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | task id: 49263191
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | errors: (none)
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | pilot state: finished 
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | transexitcode: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | exeerrorcode: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | exeerrordiag: 
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | exitcode: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | exitmsg: OK
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | cpuconsumptiontime: 38830 s
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | nevents: 400
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | neventsw: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:07,993 | INFO     | pid: 12767
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | pgrp: 12767
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | corecount: 4
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | event service: False
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | sizes: {0: 2279893, 1: 2281467, 11: 2281495, 10748: 2310439, 10749: 2319491, 10751: 2319721}
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | --------------------------------------------------
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | 
[2026-04-10 05:42:48] 2026-04-10 04:42:07,994 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2026-04-10 05:42:48] 2026-04-10 04:42:08,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,004 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 05:42:48] 2026-04-10 04:42:08,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 05:42:48] 2026-04-10 04:42:08,005 | INFO     | job 7083297821 has completed (purged errors)
[2026-04-10 05:42:48] 2026-04-10 04:42:08,005 | INFO     | overall cleanup function is called
[2026-04-10 05:42:48] 2026-04-10 04:42:09,011 | INFO     | --- collectZombieJob: --- 10, [12767]
[2026-04-10 05:42:48] 2026-04-10 04:42:09,012 | INFO     | zombie collector waiting for pid 12767
[2026-04-10 05:42:48] 2026-04-10 04:42:09,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 05:42:48] 2026-04-10 04:42:09,012 | INFO     | collected zombie processes
[2026-04-10 05:42:48] 2026-04-10 04:42:09,012 | INFO     | will attempt to kill all subprocesses of pid=12767
[2026-04-10 05:42:48] 2026-04-10 04:42:09,095 | INFO     | process IDs to be killed: [12767] (in reverse order)
[2026-04-10 05:42:48] 2026-04-10 04:42:09,120 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 05:42:48] 2026-04-10 04:42:09,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 05:42:48] 2026-04-10 04:42:09,122 | INFO     | did not find any defunct processes belonging to 12767
[2026-04-10 05:42:48] 2026-04-10 04:42:09,123 | INFO     | did not find any defunct processes belonging to 12767
[2026-04-10 05:42:48] 2026-04-10 04:42:09,123 | INFO     | Ready for new job
[2026-04-10 05:42:48] 2026-04-10 04:42:09,124 | INFO     | **************************************
[2026-04-10 05:42:48] 2026-04-10 04:42:09,124 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 05:42:48] 2026-04-10 04:42:09,124 | INFO     | **************************************
[2026-04-10 05:42:48] 2026-04-10 04:42:09,124 | INFO     | 
[2026-04-10 05:42:48] 2026-04-10 04:42:09,146 | INFO     | architecture information:
[2026-04-10 05:42:48] 2026-04-10 04:42:09,147 | INFO     | executing command: cat /etc/os-release
[2026-04-10 05:42:48] 2026-04-10 04:42:09,153 | INFO     | cat /etc/os-release:
[2026-04-10 05:42:48] NAME="CentOS Linux"
[2026-04-10 05:42:48] VERSION="7 (Core)"
[2026-04-10 05:42:48] ID="centos"
[2026-04-10 05:42:48] ID_LIKE="rhel fedora"
[2026-04-10 05:42:48] VERSION_ID="7"
[2026-04-10 05:42:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 05:42:48] ANSI_COLOR="0;31"
[2026-04-10 05:42:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 05:42:48] HOME_URL="https://www.centos.org/"
[2026-04-10 05:42:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 05:42:48] 
[2026-04-10 05:42:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 05:42:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 05:42:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 05:42:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 05:42:48] 
[2026-04-10 05:42:48] 2026-04-10 04:42:09,154 | INFO     | **************************************
[2026-04-10 05:42:48] 2026-04-10 04:42:09,657 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2026-04-10 05:42:48] 2026-04-10 04:42:09,669 | INFO     | sufficient remaining disk space (431651553280 B)
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | INFO     | update_server=False
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 05:42:48] 2026-04-10 04:42:09,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 05:42:48] 2026-04-10 04:42:09,671 | INFO     | aborting loop
[2026-04-10 05:42:48] 2026-04-10 04:42:09,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 05:42:48] 2026-04-10 04:42:09,840 | INFO     | all payload control threads have been joined
[2026-04-10 05:42:48] 2026-04-10 04:42:10,304 | INFO     | all data control threads have been joined
[2026-04-10 05:42:48] 2026-04-10 04:42:10,449 | INFO     | all job control threads have been joined
[2026-04-10 05:42:48] 2026-04-10 04:42:10,676 | INFO     | [job] retrieve thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:10,676 | INFO     | [job] queue monitor thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:10,677 | INFO     | [job] job monitor thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:10,846 | INFO     | [payload] control thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,267 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,310 | INFO     | [data] control thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,456 | INFO     | [job] control thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,505 | INFO     | [data] copytool_in thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,677 | INFO     | [data] copytool_out thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:11,678 | INFO     | [payload] failed_post thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:12,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 05:42:48] 2026-04-10 04:42:12,054 | INFO     | [job] validate thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:12,055 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:12,055 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:12,234 | INFO     | [payload] validate_post thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:16,013 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:20,292 | INFO     | job.realtimelogging is not enabled
[2026-04-10 05:42:48] 2026-04-10 04:42:21,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 05:42:48] 2026-04-10 04:42:39,454 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-04-10 05:42:48] 2026-04-10 04:42:40,143 | INFO     | PID=8387 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-10 05:42:48] 2026-04-10 04:42:40,144 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 05:42:48] 2026-04-10 04:42:40,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 05:42:48] 2026-04-10 04:42:40,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 05:42:48] 2026-04-10 04:42:43,118 | INFO     | [monitor] cgroup control has ended
[2026-04-10 05:42:48] 2026-04-10 04:42:43,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840215004992)>', '<ExcThread(monitor, started 139839487858432)>']
[2026-04-10 05:42:48] 2026-04-10 04:42:44,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 05:42:48] 2026-04-10 04:42:44,166 | INFO     | [monitor] control thread has ended
[2026-04-10 05:42:48] 2026-04-10 04:42:48,692 | INFO     | all workflow threads have been joined
[2026-04-10 05:42:48] 2026-04-10 04:42:48,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 05:42:48] 2026-04-10 04:42:48,693 | INFO     | traces error code: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:48,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 05:42:48] 2026-04-10 04:42:48,786 [wrapper] ==== pilot stdout END ====
[2026-04-10 05:42:48] 2026-04-10 04:42:48,788 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 05:42:48] 2026-04-10 04:42:48,791 [wrapper] pilotpid: 8387
[2026-04-10 05:42:48] 2026-04-10 04:42:48,792 [wrapper] Pilot exit status: 0
[2026-04-10 05:42:48] 2026-04-10 04:42:48,815 [wrapper] pandaids: 7083297821
[2026-04-10 05:42:48] 2026-04-10 04:42:48,830 [wrapper] cleanup supervisor_pilot   17977 8388
[2026-04-10 05:42:48] 2026-04-10 04:42:48,832 [wrapper] Test setup, not cleaning
[2026-04-10 05:42:48] 2026-04-10 04:42:48,834 [wrapper] apfmon messages muted
[2026-04-10 05:42:48] 2026-04-10 04:42:48,836 [wrapper] ==== wrapper stdout END ====
[2026-04-10 05:42:48] 2026-04-10 04:42:48,838 [wrapper] ==== wrapper stderr END ====
[2026-04-10 05:42:48]  *** Error codes and diagnostics ***
[2026-04-10 05:42:48]     "exeErrorCode": 0,
[2026-04-10 05:42:48]     "pilotErrorCode": 0,
[2026-04-10 05:42:48]  *** Listing of results directory ***
[2026-04-10 05:42:48] total 418396
[2026-04-10 05:42:48] -rwx------ 1 m m     36322 Apr  9 23:43 runpilot2-wrapper.sh
[2026-04-10 05:42:48] -rw-r--r-- 1 m m      5094 Apr 10 01:06 queuedata.json
[2026-04-10 05:42:48] -rw-r--r-- 1 m m    644190 Apr 10 01:06 pilot3.tar.gz
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m       100 Apr 10 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 05:42:48] -rwxr-xr-x 1 m m      7986 Apr 10 02:41 run_atlas
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m       105 Apr 10 02:41 job.xml
[2026-04-10 05:42:48] -rw-r--r-- 2 m m     15665 Apr 10 02:41 start_atlas.sh
[2026-04-10 05:42:48] drwxrwx--x 2 m m      4096 Apr 10 02:41 shared
[2026-04-10 05:42:48] -rw-r--r-- 2 m m    656933 Apr 10 02:41 input.tar.gz
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m      5872 Apr 10 02:41 init_data.xml
[2026-04-10 05:42:48] -rw-r--r-- 2 m m 225634386 Apr 10 02:41 EVNT.49263189._000538.pool.root.1
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m         0 Apr 10 02:41 boinc_lockfile
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m      2576 Apr 10 02:41 pandaJob.out
[2026-04-10 05:42:48] -rw------- 1 m m    997892 Apr 10 02:42 agis_schedconf.cvmfs.json
[2026-04-10 05:42:48] -rw------- 1 m m   1511579 Apr 10 02:42 agis_ddmendpoints.agis.ALL.json
[2026-04-10 05:42:48] -rw------- 1 m m       416 Apr 10 02:42 workernode_map.json
[2026-04-10 05:42:48] drwx------ 5 m m      4096 Apr 10 02:42 pilot3
[2026-04-10 05:42:48] -rw------- 1 m m 196223866 Apr 10 05:41 HITS.49263191._034411.pool.root.1
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m       488 Apr 10 05:41 boinc_task_state.xml
[2026-04-10 05:42:48] -rw------- 1 m m      1013 Apr 10 05:42 memory_monitor_summary.json
[2026-04-10 05:42:48] -rw------- 1 m m    282021 Apr 10 05:42 log.49263191._034411.job.log.tgz.1
[2026-04-10 05:42:48] -rw------- 1 m m      6316 Apr 10 05:42 heartbeat_new.json
[2026-04-10 05:42:48] -rw------- 1 m m      6207 Apr 10 05:42 heartbeat.json
[2026-04-10 05:42:48] -rw------- 1 m m        96 Apr 10 05:42 pilot_heartbeat.json
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m        28 Apr 10 05:42 wrapper_checkpoint.txt
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m      8192 Apr 10 05:42 boinc_mmap_file
[2026-04-10 05:42:48] -rw------- 1 m m      4812 Apr 10 05:42 pilotlog.txt
[2026-04-10 05:42:48] -rw------- 1 m m    978812 Apr 10 05:42 log.49263191._034411.job.log.1
[2026-04-10 05:42:48] -rw------- 1 m m       357 Apr 10 05:42 output.list
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m       410 Apr 10 05:42 runtime_log
[2026-04-10 05:42:48] -rw------- 1 m m   1280000 Apr 10 05:42 result.tar.gz
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m      8351 Apr 10 05:42 runtime_log.err
[2026-04-10 05:42:48] -rw------- 1 m m       639 Apr 10 05:42 2b83adff0adf.diag
[2026-04-10 05:42:48] -rw-rw-r-- 1 m m     20876 Apr 10 05:42 stderr.txt
[2026-04-10 05:42:48] HITS file was successfully produced:
[2026-04-10 05:42:48] -rw------- 1 m m 196223866 Apr 10 05:41 shared/HITS.pool.root.1
[2026-04-10 05:42:48]  *** Contents of shared directory: ***
[2026-04-10 05:42:48] total 413892
[2026-04-10 05:42:48] -rw-r--r-- 2 m m     15665 Apr 10 02:41 start_atlas.sh
[2026-04-10 05:42:48] -rw-r--r-- 2 m m    656933 Apr 10 02:41 input.tar.gz
[2026-04-10 05:42:48] -rw-r--r-- 2 m m 225634386 Apr 10 02:41 ATLAS.root_0
[2026-04-10 05:42:48] -rw------- 1 m m 196223866 Apr 10 05:41 HITS.pool.root.1
[2026-04-10 05:42:48] -rw------- 1 m m   1280000 Apr 10 05:42 result.tar.gz
05:42:50 (4078): run_atlas exited; CPU time 38926.527635
05:42:50 (4078): called boinc_finish(0)

</stderr_txt>
]]>

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